Pbar006637.1
Basic Information
- Insect
- Pogonomyrmex barbatus
- Gene Symbol
- Nfat5
- Assembly
- GCA_000187915.1
- Location
- NW:325864-362343[-]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 3 1.1e+04 -5.0 1.7 117 133 60 75 50 83 0.39 2 3 2.9e-29 1e-25 89.9 0.4 1 168 244 404 244 405 0.87 3 3 3 1.1e+04 -8.2 11.3 94 130 1052 1112 987 1146 0.39
Sequence Information
- Coding Sequence
- ATGTTGCTGAAAGGCCGGACTGCGACGGCGAGGAAGAACCGCAGGCATCATGGGAAAAACGGTGCCACATCCGCGGCCGGTAACAATGCAGGCGGCGCGTCGTCAACGGTGACAGCATCGTCCGTTTCAAGAAACACTACTGGTAATCGTGCCCATTCCGCGACTAGGAGAACGATTACTAATCAGcgacagcagcaacaacatcgacaacagcaacagcaacaaacTCAACTGCAACAACAACCAAAACAAGGCAGACTTCCATTATCATCTTTCGGCACAGCTGTGAGGAGTTCGGATGATCACGGGCCTAGAACCGGCACAACCCCAGACGACAATTCAAACGACTCCGGCCTTGGTTCTGAGGAACGCCAACAGCACTTCAATAACGTCACTctcTGGAATAACGTTGGCGAGGAGGAttcaaagagaagaaagatggaCATCAAATTAGAGTCTGAGGATGCGAACTTTGCATTTCCGGAAGTGGCTCCCGGAACTAGTCCTGACAATAAGTCATCGACAGTTAGAACCACTGTCAATGGAATTGGTTTGGGAGGAATATCCGGTAACAAATCCGGAAATGCTAACTCTATAGGCAGAGTTGTGGGGGTAACCAGGCCCCGACCTGCCATGGGCGTGTTGGCCAAGAGAACACCAATTACTCATCAAGGACCTGTTACCCTTATCTCGCAACTATCCAACATTTCCGCCGACGGCAAAATCCAACTGCAAATTGTCTGCCAACCTGAGCAACAGCACCGAGCTCGCTATCAGACGGAGGGCTCGCGGGGTGCGGTGAAGGACCGTAGCGGCAATGGCTTTCCCATCGTTCGACTGGTCGGCTACGATAAGCCGACGACCCTGCAGGTGTTTATTGGTACTGATCTTGGCCGAGTCGCGCCTCACATGTTTTACCAGGCCTGTCGAGTAAGCGGCAAAAACTCCACACCTTGCGTCGAGCGGAAGATCGACGGCACGATCGTAATAGAAATTGACATGGAGCCAGCGAAGGACATCACCTGCGACTGCGTCGGCATTCTTAAGGAACGTAATGTCGATGTCGAACATAGGTTCCCTCAGGAGGCCGGGCTGTTGCAAGGAAGGAGCAAGAAGAAATCCACACGGTGCCGCATGGTGTTTCGCACGATTATCACGCACGCCGATGGAACCACAGAGACGCTACAAGTGTGCTCTCAGCCGATAGTCTGCACTCAACCGCCTGGAATTCCAGAGATCTGCAAAAAGTCTCTGACATCCTGCCCGTGTACTGGCGGGTTGGAACTCTTTATACTGGGTAAGAACTTCCTCAAGGACACCCGAGTAGTCTTTCAGTTGGACAATGATGATCTATCGAGTAGCCTTGAACCACATTGGGAATGCACCGTACTGCCGGACAAGGAATATTTACATCCGGCACACTTAGTATGCGTAATTCCATCCTACCGCAGACAGGATCTTGCGCCTACGGAAACAATCAGCGTCAAGTTATATGCGGTGTCCTCCGGAAAAACCAGCGAACCGCATACTTTTCTTTACACGGCCACCTCTACTCCTCCGCAGCCATCCGTAGGGAAAATCGAGTCCCTCTCGCCTCCGCTGACAAATGGCGAAGCCAGTCTGACTTCACCCTCTGTCGTGGCTACGGCTGTTGCGTCCAGCACTCTTCTAACGCAAACTGCTGCGGGAGCTGCAAGTTTTTTGACGAACACTGCAACTCAACCGCAACAGAGTACTCCTACGGAAGCTTTGAAGAACGACCCCAGTCCACCACCGACAGGACCATCTCAGGTGACCCCGGTGATGCTATGGACTTCTTCTCAGTCCTCGAATTCGCCTTCCGATGTCATGATGCCACCTCCGGTGCTCGTAGCGAATCCTCTAATGACTCGCCGATCCTCGTCCAATCTTCAGCTAATTCTGCCGGATAACTTAAAAACAGAAGTGCTCGACGAGAACAGTCAGAATAGTATGCTGAGCGAAAACAGTATGCAAAGCATTCCGACGCCGACGACGGCCACAAACGGACCAACGTCGGTCACTTCTCCCCTTCAGCAGTTGGAGAATTCTAGAGAGGCCGCGCCCTCGCAAGCAGATATTATCAGGACCGTTGCCGTCGCGACGGCAGCTAGTAACAGCCCTGTGCACGAGAATGTAAGCGGTCTTCTCGGAGTGGTAGATCTGATACGCACCCAGCATCCTTTGTCAAATTGCGCAATGAATACGCATCATTCGACTTCGTTTGGAGGCATGCATGAGTCAACTCAGGTCCAAGTTCTTAGTCCTCATCGTCTCAAGGACACGAACGGTGTCCTGTCAACGGACAACAGTTCCAATGGTGCCGTCCTTCAGGGTGCCGGGGTAGTGGATCTTCGTATGAAACATCACCATCATCAGTCCGACTTTGGCACACTGTCAGGTTTCACCGGTGCTTCCGGGTCGCAGCAATTGTCAGCGTCGAATAATCATGTGGTGGGAAAGTACCTGAATCACGTGGAATCCTCGGTTGGTACCAACGAGAAATCTGATAATCCAGAAAATGAGTTCGCTATTCAACAACAGCGGGCTTCCATCATTTCGGGAAGTAGTCAACAGCCGGCAGCTCCTCCGAGAATTCTAGCCAATACAGGACAAACTTCAGTAAAATTGGATGCCTTAGTAAACTCCGCAGCTGAACAGATGGTATCTCCATTACATTCGGTGAATCCCAATTCTACAACAATATTGAATCACGTAACAGCAGAGCACGAGCCAATGGGCCAGCAGACTAGAACTAGTCCGCCGATTCCGGTGAAGACAATGTTACTGGAGGCATTGATCCCTTCGCAAACGGTACAACCATTGGCAGAGATTGCGGGTACAACATCAGTATCGCCTACGACAACGGTAGAGCAAACGGGAGAAAGTCTATTAAATACTATCAATGCAGCATTATTACCGCAATTGCCAGAAACACAAGTTAATACGGCAACTGCCACGTCGAATTCTACagTTGCTGGCAATGCAATGCCAGCAGTCACAGCAGAACAAATGCAACAGCAGATTCAAGTGCTTACTCAAGATGTAACTGTAATGCAACAAGTACAACAAGTAGAACAAGTAGTGGCACAAGCACAGCAACAAGTCGAGCAAGTCGTTGCGCAGGCGCAGCAACAGGCGGTCCAAGTGGTGCATCAGGCCCAGCAACAGGTAGTCCAGCAAGTAGTGCAGCATGCTCAAGTAGTGCAGCAAGCAGTGCAGCAAGTACAAGCTGTGCAACAAGTTCAAGCGGCTCAGGTAGTGCAGCAAGCGGTGCAGCAGGCCACTGAAGAAGTGGTGCAACAAGCGGTGCAGCAAGCAACACAAGAGGTGGTACAGCAGgTTCAAGCGGTACAGCAAGCTGTCCAACAAGCTCAAGCGGCGCAAGCCATGCAGCAGGCTGTTCAACAAGATATTGGTTCTATGTTAAATCAACCCGCGGGCTTTGTGGCCGAAGCTAGTTCTGCTTTAGCTAGCGGTGCTGCTCAGGAACCTTCTCAACAACGTTTGACTAATGCAGCCGAACAAGCTATCAATAATGTCATCACCAATGCCACAAAggatattatcaataatcgGCCTATCTCGACGACTACCGCTCATGCAATTATTGCTACGAAGAAAATTCTGAATAGTGTGGCGACTCAAAGTGCGCAGTTGATGAATAATGCGATGGAAGGAATCCTACCGAAATCTCCTTCAGCACAAAACAACATTATCGAACAAGTCGCCAGCAAATCACCACCGGTTGCACTTCCGGTTGCTACAAATCGTCAGGCTGTGAATGCTCCAATTCCCAATCCTGCCGCGAGTACCGCATCCAATAGAAAGACGGAGGATGGAATGCTGCCTCAAGAACTCACCTCCATGTCGGAACATGATCTTTTGAGCTACATTAATCCAAATTGTTTCGAGCAAAGCGGATTCCTCTTGTAG
- Protein Sequence
- MLLKGRTATARKNRRHHGKNGATSAAGNNAGGASSTVTASSVSRNTTGNRAHSATRRTITNQRQQQQHRQQQQQQTQLQQQPKQGRLPLSSFGTAVRSSDDHGPRTGTTPDDNSNDSGLGSEERQQHFNNVTLWNNVGEEDSKRRKMDIKLESEDANFAFPEVAPGTSPDNKSSTVRTTVNGIGLGGISGNKSGNANSIGRVVGVTRPRPAMGVLAKRTPITHQGPVTLISQLSNISADGKIQLQIVCQPEQQHRARYQTEGSRGAVKDRSGNGFPIVRLVGYDKPTTLQVFIGTDLGRVAPHMFYQACRVSGKNSTPCVERKIDGTIVIEIDMEPAKDITCDCVGILKERNVDVEHRFPQEAGLLQGRSKKKSTRCRMVFRTIITHADGTTETLQVCSQPIVCTQPPGIPEICKKSLTSCPCTGGLELFILGKNFLKDTRVVFQLDNDDLSSSLEPHWECTVLPDKEYLHPAHLVCVIPSYRRQDLAPTETISVKLYAVSSGKTSEPHTFLYTATSTPPQPSVGKIESLSPPLTNGEASLTSPSVVATAVASSTLLTQTAAGAASFLTNTATQPQQSTPTEALKNDPSPPPTGPSQVTPVMLWTSSQSSNSPSDVMMPPPVLVANPLMTRRSSSNLQLILPDNLKTEVLDENSQNSMLSENSMQSIPTPTTATNGPTSVTSPLQQLENSREAAPSQADIIRTVAVATAASNSPVHENVSGLLGVVDLIRTQHPLSNCAMNTHHSTSFGGMHESTQVQVLSPHRLKDTNGVLSTDNSSNGAVLQGAGVVDLRMKHHHHQSDFGTLSGFTGASGSQQLSASNNHVVGKYLNHVESSVGTNEKSDNPENEFAIQQQRASIISGSSQQPAAPPRILANTGQTSVKLDALVNSAAEQMVSPLHSVNPNSTTILNHVTAEHEPMGQQTRTSPPIPVKTMLLEALIPSQTVQPLAEIAGTTSVSPTTTVEQTGESLLNTINAALLPQLPETQVNTATATSNSTVAGNAMPAVTAEQMQQQIQVLTQDVTVMQQVQQVEQVVAQAQQQVEQVVAQAQQQAVQVVHQAQQQVVQQVVQHAQVVQQAVQQVQAVQQVQAAQVVQQAVQQATEEVVQQAVQQATQEVVQQVQAVQQAVQQAQAAQAMQQAVQQDIGSMLNQPAGFVAEASSALASGAAQEPSQQRLTNAAEQAINNVITNATKDIINNRPISTTTAHAIIATKKILNSVATQSAQLMNNAMEGILPKSPSAQNNIIEQVASKSPPVALPVATNRQAVNAPIPNPAASTASNRKTEDGMLPQELTSMSEHDLLSYINPNCFEQSGFLL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00867919;
- 90% Identity
- iTF_01228793;
- 80% Identity
- -