Basic Information

Insect: Pogonocherus hispidulus
Gene Symbol: stc
Assembly: GCA_963924545.1
Location: OZ004694.1:25322642-25334224[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 3 5.7e+04 -4.4 2.9 6 10 406 410 402 410 0.55

2 14 0.75 1.4e+04 -2.2 0.2 4 10 436 442 435 442 0.89

3 14 1.3e-05 0.24 13.1 13.5 3 18 450 465 449 466 0.93

4 14 2.3e-08 0.00044 21.8 11.2 1 18 502 519 502 520 0.96

5 14 4.4e-07 0.0084 17.7 9.1 1 18 560 577 560 578 0.92

6 14 0.00095 18 7.1 13.9 4 19 625 640 618 640 0.87

7 14 2.1 3.9e+04 -3.6 2.0 5 10 669 674 669 674 0.93

8 14 0.007 1.3e+02 4.3 9.3 1 11 680 690 680 691 0.96

9 14 2.3 4.3e+04 -3.7 0.8 4 10 695 701 694 701 0.69

10 14 4.1e-10 7.9e-06 27.4 14.5 1 18 707 724 707 725 0.99

11 14 0.0015 29 6.4 13.0 2 19 765 781 764 781 0.76

12 14 0.31 5.8e+03 -0.9 0.3 6 11 784 789 784 790 0.94

13 14 0.00072 14 7.5 20.7 1 19 817 836 807 839 0.85

14 14 0.031 5.9e+02 2.2 16.6 1 18 846 864 846 865 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	3	5.7e+04	-4.4	2.9	6	10	406	410	402	410	0.55
2	14	0.75	1.4e+04	-2.2	0.2	4	10	436	442	435	442	0.89
3	14	1.3e-05	0.24	13.1	13.5	3	18	450	465	449	466	0.93
4	14	2.3e-08	0.00044	21.8	11.2	1	18	502	519	502	520	0.96
5	14	4.4e-07	0.0084	17.7	9.1	1	18	560	577	560	578	0.92
6	14	0.00095	18	7.1	13.9	4	19	625	640	618	640	0.87
7	14	2.1	3.9e+04	-3.6	2.0	5	10	669	674	669	674	0.93
8	14	0.007	1.3e+02	4.3	9.3	1	11	680	690	680	691	0.96
9	14	2.3	4.3e+04	-3.7	0.8	4	10	695	701	694	701	0.69
10	14	4.1e-10	7.9e-06	27.4	14.5	1	18	707	724	707	725	0.99
11	14	0.0015	29	6.4	13.0	2	19	765	781	764	781	0.76
12	14	0.31	5.8e+03	-0.9	0.3	6	11	784	789	784	790	0.94
13	14	0.00072	14	7.5	20.7	1	19	817	836	807	839	0.85
14	14	0.031	5.9e+02	2.2	16.6	1	18	846	864	846	865	0.89

Sequence Information

Coding Sequence: ATGTCGTTCTACAACAATCGACCGAACTACACACATTTCAATTCCAATCACGAAGCTCACAGCCAAAATGCTGCTCAAAGTTCTGGATTCTCAAATATGCCAGAATTGCCTAATCAAGTTGATGTAAGTTATTCTACGTTGGAGCCTACTGCTCAAGAATTTCATCCTCTGAGTCAAACGACGAGTTCTACAAATGGAGCTGTCAAGAAAACATCtcgaaatgaaaaaaatcagtACCGAAATACAGGAAAAAATAGACGTAACTGGTATGGAAGTGGCAGAACATTTAATGGTTCTAAAGGTGACAATTTTAATAGAAATGAAAGAACTTATAAAGATGAAGAGCAAAGTAACCTTCAAAATTCTGCAAACTTTGTAAATAAATCCAATCAAGAATCACGttcaaatgattttttaatttcacccAATTACAATTCTGACAAATTTCCAGATGACAAGACAAATTTAGACCAATcacaacttcaatattttgaaagaaatcaGGATACATCTAGTAAACAATAtggaaatagaaataaatataaagaaaacacaaAAACTGGTTATCAGACATTTAATCTCAATAACACACGATCTTATGAAAATTCTAGTAAGAACTTTAGAAGTAGTAGTAGAACTTATGAAAAGCCATATAGAGCTAATGTTCATAATAAATATGAAAGAAGTATTAATTACTATGAGAAATCTGGTAGCGGTACATATGATAAATACAACCGAAGTAATAACTATTATGACAATTCGGGGAGaagttttactaataattattctgaTAGAAAAAACAGTAATAGTTCTATAGAAAGAAGTAATATTGATCAAATAGAAAATGAGAATTATTATAGTCAGAGAAGTGAATTTCGTATTAATGAATTTAAAGGTGGTTTTAAACCACataccaataaaaataatgagtatctagAAGGAAAGAATCGAAGAGATTGGAGAGTAACTAATtcaaataaacattccaaagattcAACAATACagcttaataaaaaaattgatGCAGCTTCTCAAAGAGAGAGATTGgaagaaatgttaaaaaatcGTCTTTTAGAATGTCTTGTTTGCTGCGAAAAAATCAGGCATATTGATAAAGTCTGGAGTTGCTCTCAGTGCTATCATATTTTACATCTATTTTGTGTGGCTGCTTGGGCAAAGTCTTCCAAGATGGAAAATGGGTGGCGCTGTCCAGCTTGCCAAAACCTCTGCACTGACGTTCCAAAACAGTATAAATGCTATTGTGGCAAAAGAGTTGATCCTAAATACGAACCAGGGGTTATTTCACATGGATGCGGAGAAATTTGTTTGAGAAAAGGGCGGGCTTGCGAACACAAATGTACCATTCTTTGTCACCCAGGTCCTTGCCCTGATTGTGATGTAATGGTTGCCAAATCGTGCGGTTGTGGATTCACACAGCCAACTGTAAAATGTAGTACTGATATAGAGATAGTCTGCAATTCCATTtgtaataaaactttaaacTGTGGCATCCACAAGTGTAAATCTATATGTCATCCTGGAAGTTGTAGTTTATGTACTGAAACTATAATACAAGAATGCTATTGTGGAAAAGAGGGTAGGAAGGTTCCTTGTTCAGCCGAGTTTTCTGGTAGAACCCAGTATGCTTGCGAAGATATATGTGCAAAAACTTTATCTTGCGAGAATCATAAATGTCGGAGAATATGCCATGCTGGCCCATGTGATCTTTGCCTTAGGGATGTTAATCTGGTGACCACTTGTCCTTGTGGTAAATCTTCTCTTGAAAAAACAAGAAGTTCCTGTTTGGAGTCTATTCCTTGCTGTGATAAGatttgtgGAAAAGTGCTCAATTGTGGCCAACCAAGTTTACCTCATAAATGTCGAGAAAAGTGTCATGAAAGTGAGTGCCCTAAATGTCCCCTAACTACTGTAGTAAGATGTCGCTGTGGTCACATGGACAAAGAGTTGGCTTGCCAAAAATTAACTACTAAAGCAGATGATGCGAGATGTGAAAAAAAATGCACAAAGaagCGTACATGTGGTAAACATAAATGCAACCAACGTTGTTGTATAGAAATAGAACATTTTTGCCCTCTGCCCTGCAACCATCAACTATCATGTGGTCAACACAGATGTGAACGCACCTGCCACTCTGGTCGATGTCCTCCTTGTATAGAAACAAGTTTTGAGGAGTTATATTGTGAATGTGGGGCAAGTGTATTATATCCACCTGTCCCATGTGGCACGAAACCACCTCTTTGTAATAAGCCTTGCTCAAGGCAACGGCCATGTGGACATGATGTAAATCATAACTGCCACACAGGCCCTTGCCCTCCTTGTACTATTCTCTGTAAAAGGTGGTGTCACGGCCACCATGAGCAACGTTCAGCGATTCCCTGTCATCAAGAGAACTTCAGTTGTGGTTTACCTTGTGGAAAACCAATGCCTTGCAGGAGACACAAATGCAATAAACCCTGTCATGAAGGTCAATGTCTTTTGCCTTGTAAACAACCATGCAATGTTGAGAGAACTTTGTGTGGACATCCTTGTGGTAGACCATGTCACGATCCTCCATGTCCTGAAAGTAATTGTAAACAAAATGTATCTGTTACCTGTGCGTGTGGTCTTCAGAAGAGCATCAGACCTTGCTTAGAAGTTTCTGAagagtttaaaaatattgaaatggcCAAGTTAAAGGATAAAATTGGAGATTTATGCAAAGATCAAACCGTAGATATTTCTGATATTTATAAACCGAAGAAACCAACAATTCTTAAAATACTGGAGTGTACCGAAGAATGTCGTGTTTTAGACAGAAACAGAAGACTCGCCATTGGGTTACAAATTCGTAATCCCGATTTAAGTCAAAAATTAACACCTAAATACACAGATTTTATGAGACAATGGGCCAAGAAAGATCCTCATTTTTGTCAAAAAGTCCATGATAAATTAACTGAGTTGGTTCAGTTGGCAAAAcaaagtaaacaaaaaagtcGTTCTTATTCGTTTGAATCCATGAATAGGGACAAAAGGCATTTTATTCATGAATATTGTGAGCATTTTGGTATAGAAAGTGCTGCGTATGATACAGAACCAAATCGAAATATTGTAGCCACAGCTATTAAAGATAAGTCTTGGTTACCAAGTATGAGTTTGTTAGAAGTTATTCAAAGAGAAAATGGACAAAGGAAAGTTCCTGGGCCTTCGGTTCTTGGGAAGAATACAGCAAGCAAACCTGAAATTGTGTCTTTGCGATTGCCCACCCAAACACAGAGGCCAAATATGCATCCAGGTGAAGTTATCGACTATTTTGATCCACCAATatag
Protein Sequence: MSFYNNRPNYTHFNSNHEAHSQNAAQSSGFSNMPELPNQVDVSYSTLEPTAQEFHPLSQTTSSTNGAVKKTSRNEKNQYRNTGKNRRNWYGSGRTFNGSKGDNFNRNERTYKDEEQSNLQNSANFVNKSNQESRSNDFLISPNYNSDKFPDDKTNLDQSQLQYFERNQDTSSKQYGNRNKYKENTKTGYQTFNLNNTRSYENSSKNFRSSSRTYEKPYRANVHNKYERSINYYEKSGSGTYDKYNRSNNYYDNSGRSFTNNYSDRKNSNSSIERSNIDQIENENYYSQRSEFRINEFKGGFKPHTNKNNEYLEGKNRRDWRVTNSNKHSKDSTIQLNKKIDAASQRERLEEMLKNRLLECLVCCEKIRHIDKVWSCSQCYHILHLFCVAAWAKSSKMENGWRCPACQNLCTDVPKQYKCYCGKRVDPKYEPGVISHGCGEICLRKGRACEHKCTILCHPGPCPDCDVMVAKSCGCGFTQPTVKCSTDIEIVCNSICNKTLNCGIHKCKSICHPGSCSLCTETIIQECYCGKEGRKVPCSAEFSGRTQYACEDICAKTLSCENHKCRRICHAGPCDLCLRDVNLVTTCPCGKSSLEKTRSSCLESIPCCDKICGKVLNCGQPSLPHKCREKCHESECPKCPLTTVVRCRCGHMDKELACQKLTTKADDARCEKKCTKKRTCGKHKCNQRCCIEIEHFCPLPCNHQLSCGQHRCERTCHSGRCPPCIETSFEELYCECGASVLYPPVPCGTKPPLCNKPCSRQRPCGHDVNHNCHTGPCPPCTILCKRWCHGHHEQRSAIPCHQENFSCGLPCGKPMPCRRHKCNKPCHEGQCLLPCKQPCNVERTLCGHPCGRPCHDPPCPESNCKQNVSVTCACGLQKSIRPCLEVSEEFKNIEMAKLKDKIGDLCKDQTVDISDIYKPKKPTILKILECTEECRVLDRNRRLAIGLQIRNPDLSQKLTPKYTDFMRQWAKKDPHFCQKVHDKLTELVQLAKQSKQKSRSYSFESMNRDKRHFIHEYCEHFGIESAAYDTEPNRNIVATAIKDKSWLPSMSLLEVIQRENGQRKVPGPSVLGKNTASKPEIVSLRLPTQTQRPNMHPGEVIDYFDPPI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01015497;
90% Identity: -
80% Identity: -