Basic Information

Insect: Monochamus alternatus
Gene Symbol: stc
Assembly: GCA_037114965.1
Location: CM073431.1:15764675-15769166[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 3 5.2e+04 -4.8 3.4 6 10 403 407 400 407 0.69

2 15 1.2e-05 0.2 13.2 13.0 4 18 448 462 446 463 0.93

3 15 3.1e-10 5.3e-06 27.8 13.1 1 19 499 517 499 517 0.98

4 15 0.6 1e+04 -1.9 1.2 5 10 546 551 540 551 0.79

5 15 8.3e-10 1.4e-05 26.4 13.1 1 18 557 574 557 575 0.98

6 15 1.1e-05 0.2 13.2 13.9 4 19 622 637 615 637 0.87

7 15 2.1 3.6e+04 -3.6 2.0 5 10 666 671 666 671 0.93

8 15 0.007 1.2e+02 4.3 9.3 1 11 677 687 677 688 0.96

9 15 2.3 3.9e+04 -3.7 0.8 4 10 692 698 691 698 0.69

10 15 4.1e-10 7.1e-06 27.4 14.5 1 18 704 721 704 722 0.99

11 15 2.6 4.5e+04 -3.9 0.7 6 10 751 755 750 755 0.84

12 15 0.001 18 7.0 13.6 1 19 761 778 761 778 0.87

13 15 0.31 5.3e+03 -0.9 0.3 6 11 781 786 781 787 0.94

14 15 8.6e-08 0.0015 20.0 18.9 1 19 814 833 814 836 0.97

15 15 0.034 5.9e+02 2.1 16.8 1 18 843 861 843 862 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	3	5.2e+04	-4.8	3.4	6	10	403	407	400	407	0.69
2	15	1.2e-05	0.2	13.2	13.0	4	18	448	462	446	463	0.93
3	15	3.1e-10	5.3e-06	27.8	13.1	1	19	499	517	499	517	0.98
4	15	0.6	1e+04	-1.9	1.2	5	10	546	551	540	551	0.79
5	15	8.3e-10	1.4e-05	26.4	13.1	1	18	557	574	557	575	0.98
6	15	1.1e-05	0.2	13.2	13.9	4	19	622	637	615	637	0.87
7	15	2.1	3.6e+04	-3.6	2.0	5	10	666	671	666	671	0.93
8	15	0.007	1.2e+02	4.3	9.3	1	11	677	687	677	688	0.96
9	15	2.3	3.9e+04	-3.7	0.8	4	10	692	698	691	698	0.69
10	15	4.1e-10	7.1e-06	27.4	14.5	1	18	704	721	704	722	0.99
11	15	2.6	4.5e+04	-3.9	0.7	6	10	751	755	750	755	0.84
12	15	0.001	18	7.0	13.6	1	19	761	778	761	778	0.87
13	15	0.31	5.3e+03	-0.9	0.3	6	11	781	786	781	787	0.94
14	15	8.6e-08	0.0015	20.0	18.9	1	19	814	833	814	836	0.97
15	15	0.034	5.9e+02	2.1	16.8	1	18	843	861	843	862	0.89

Sequence Information

Coding Sequence: ATGTCGTTTTATAACAATCagttgaatatgaattttaattCGAATTACGAAGCTCAATCCAACAACAGTGCTCAAAGTTCTGGATTTTCCAATGCAAGAGAATTGCCTAATCAAGTTCTCGATGTAAGATATTCTACTTTGGAGCCTACTGCCCAAGAATTTCATCCTATGAACCAAACGACGGATTCCACGAATGGAGCTATCAAAAAGACATCTAGAAATGAAAAGAATCAGTATAGAGGCAAGGAAAAAAATAGACGTAATTGGTATGGAAGCGGTAGAACATTTAATGGTTCGAAACGTGACCACTTCAATAGAAGTGAGAGAAGTAGTAGAAATgaagaacaaaataattttcaagattGTGCAAGTTTTGTAGACAAATCAAATCAAGATTCATATGTTGAGGATAATTCAATTCCACATACTTACAATGTCTCCAAATttcagaaagaaaaaaatttcaatcaCTCGCAatctaaaaattttgagaaaaatctagATTCAACAAGTAAACAATatgaaaatagaaataaatataaagatgATATAAACTTAGATTACAAACCATCTAACTTTGATAGCTTCCGAACATATGAAAATCCAAATAGAAATTATAATAGAAGTAGTAGAACTTATGAGAAATTtcataaaactaataataaatatgaaaaaagtaataattattatgaaaaacaCGAGGGAAATGGTACATATGATAAATATAATCGAACCGATAACTATTATGATGGTTCAAGTAGGAGTTATACCAATAATTATTcttataagaaaaatagtaataatcCTATTGAAAGAAGTAATAATGATCAATATGAAGCTGATAATAATAAGATACAAAAGAATGAATTTCATGATGAGTTTAGAAGTGGTTTTAGACAACATAGTGGTAAAAGTGATAAACATGGAGAAGGGAAAACACGAAAAGATTGGAGAACGGCAACCAATTCCAATAAGCATTCCAAAGACTCTGCTACAAAGCTTAAGAAGTTTGACGCCGCATCCCAGAGGGAGAGGTTGGTAGAAATGCTGAACCGCCGACTTTTAGAATGTCTCGtttgttgtgaaaaaataaaaaatgccgaCAAGATTTGGAGTTGCTCCCAATGCTATCATATTCTACATTTACATTGTGTGGCTGCTTGGGCAAAATCCTCCAAAATAGAAAATGGTTGGCGTTGTCCAGCCTGTCAGAATGTATGCACTGAAGTTCCAAATCAGTACAAATGCTATTGTGGCAAAGCAGTTGATCCTAAATACACACCAGGAGTGATTCCCCACGGATGTGGAGACATCTGTCTAAGAAAAGGACGAACCTGTGATCATAAATGCACCATTCTTTGCCATCCAGGTCCTTGTCCCGACTGTGACGTGATGGTTGCCAAATCTTGTGGGTGCGGGTTTACTAAACCTATCATAAAATGTAGCGCTGACGTAGAGATAGTCTGTAATtccatttgtaataaaattttaaactgcgGCATACATAAATGTAAATCTGTATGCCATCCTGGAGATTGTAGTCCGTGCTCTGAGGATATTATACAAGAATGCTATTGTGGCAAGCAAGGTAGAAAGGTGTTATGTTCGGCTGAATTCTGTGGTAGAACCAACTATACTTGTGAAGATATATGTGGGAAAACTTTGACTTGTGGGAATCATAAATGTCGAAGAATGTGTCACGAAGGCCCATGCGATCCATGTGCCAGAGATATTAACTTGGTGACAACTTGCCCTTGTGGTAAAACCCCACTGGACAAAAAAAGGAGTTCCTGTATAGATGCTATTCCTTGCTGTGAtaagATTTGTGGAAAAGTGCTCAAATGTGGACAACCAAGCTTACCTCATAAATGTAGAGAAAACTGTCATGAAGGTGACTGTCCTAAATGCCCCCTGACCACTGTAGTAAGATGCCGATGTGGGCATATGGATAAAGAattgccgtgccaaaaattaactactaAAGCTGATGACGCTAGATGTGAGAAAAAATGCACAAAGAAACGTACGTGTGGGAAACACAAATGCAATCAACGCTGCTGCATAGAAATCGAGCATTTCTGTCCTCTTCCTTGCAACCATCAGCTCTCCTGTGGCCAACATAGATGTGAACGCACCTGTCATTCCGGTCGATGCCCCCCTTGTATCGAGACGAGCTTTGAAGAATTATACTGCGAGTGCGGGGCAAGCGTATTATACCCACCTGTTCCTTGTGGAACCAAACCACCGGCTTGCAGCAAGCCTTGCTCTAGGCAGAGACCATGTGGACACAACGTTAATCATAACTGCCACACAGGCCCCTGCCCTCCCTGCACAGTCCTCTGTAAGAGATGGTGCCACGGACATCACGAGCAACGATCGGCCATTCCCTGTCATCAAGAAAACTTCAGTTGTGGCTTGCCTTGCGGTAAGCCGATGCCTTGCGGAAGACACAAATGCAACAAGCCGTGTCACGACGGTCAGTGTCCCATGCCTTGTAAACAGCCTTGCAGCATTCAGAGAACCTTGTGCGGACATCCTTGTGGCAGACCATGCCACAGTCCTCCGTGCCCAGAAAGCAATTGTAAGCAGAATGTACCAGTTACCTGTGCTTGTGGCCTTCAGAAAAGTACTAGACCTTGCCTTGAGGTGTCGGACGAATTTAAGAATATCGAGATGGCTAAGTTAAAGGAGAAAATTGGCGATTTGTCTAAGGATCAGACTGTAGACATTTCGGACATCTGTAAGCCGAAGAAACCAACTGTtcttaaaatACTGGATTGTACCGAAGAATGTCGTGTCCTGGAAAGAAATAGAAGACTCGCTATTGGCCTACAAATCCGTAATCCTGATTTGAGTCAGAAGCTAACACCAAAATACACAGATTTTATGAAACAATGGGCAAAGAAAGATTCTCACTTCTGCCAAAAAGTACATGACAAATTAACCGAACTCGTACAATTGGCAAAGCAGAGCAAACAGAAAAGTCGTTCCTATTCCTTCGAGTCCATGAACAGGGACAAACGACATTTCATTCATGAATATTGCGAACATTTTGGAGTGGAAAGTGCCGCTTATGATACGGAACCAAACAGGAACATTGTGGCCACAGCTATTAAAGATAAATCCTGGCTGCCGAGTATGAGTTTATTAGAGGTTATCCAGAGAGAAAACGGCCAGAGGAAGGTACCAGGGCCATCCGTTCTCGGTAAAAGCACAGCAAGTAAACCGGAAATCGTATCTTTGCGATTGCCAAGCCAAACACAGAGACCAAACACACATCCAGGCGAAATCATTGATTACTTTGATGCGCCGCCGcagttataa
Protein Sequence: MSFYNNQLNMNFNSNYEAQSNNSAQSSGFSNARELPNQVLDVRYSTLEPTAQEFHPMNQTTDSTNGAIKKTSRNEKNQYRGKEKNRRNWYGSGRTFNGSKRDHFNRSERSSRNEEQNNFQDCASFVDKSNQDSYVEDNSIPHTYNVSKFQKEKNFNHSQSKNFEKNLDSTSKQYENRNKYKDDINLDYKPSNFDSFRTYENPNRNYNRSSRTYEKFHKTNNKYEKSNNYYEKHEGNGTYDKYNRTDNYYDGSSRSYTNNYSYKKNSNNPIERSNNDQYEADNNKIQKNEFHDEFRSGFRQHSGKSDKHGEGKTRKDWRTATNSNKHSKDSATKLKKFDAASQRERLVEMLNRRLLECLVCCEKIKNADKIWSCSQCYHILHLHCVAAWAKSSKIENGWRCPACQNVCTEVPNQYKCYCGKAVDPKYTPGVIPHGCGDICLRKGRTCDHKCTILCHPGPCPDCDVMVAKSCGCGFTKPIIKCSADVEIVCNSICNKILNCGIHKCKSVCHPGDCSPCSEDIIQECYCGKQGRKVLCSAEFCGRTNYTCEDICGKTLTCGNHKCRRMCHEGPCDPCARDINLVTTCPCGKTPLDKKRSSCIDAIPCCDKICGKVLKCGQPSLPHKCRENCHEGDCPKCPLTTVVRCRCGHMDKELPCQKLTTKADDARCEKKCTKKRTCGKHKCNQRCCIEIEHFCPLPCNHQLSCGQHRCERTCHSGRCPPCIETSFEELYCECGASVLYPPVPCGTKPPACSKPCSRQRPCGHNVNHNCHTGPCPPCTVLCKRWCHGHHEQRSAIPCHQENFSCGLPCGKPMPCGRHKCNKPCHDGQCPMPCKQPCSIQRTLCGHPCGRPCHSPPCPESNCKQNVPVTCACGLQKSTRPCLEVSDEFKNIEMAKLKEKIGDLSKDQTVDISDICKPKKPTVLKILDCTEECRVLERNRRLAIGLQIRNPDLSQKLTPKYTDFMKQWAKKDSHFCQKVHDKLTELVQLAKQSKQKSRSYSFESMNRDKRHFIHEYCEHFGVESAAYDTEPNRNIVATAIKDKSWLPSMSLLEVIQRENGQRKVPGPSVLGKSTASKPEIVSLRLPSQTQRPNTHPGEIIDYFDAPPQL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01228084;
90% Identity: -
80% Identity: -