Phis040711.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Pogonocherus hispidulus
Gene Symbol
dl
Assembly
GCA_963924545.1
Location
OZ004699.1:167795-184112[-]

Transcription Factor Domain

TF Family
RHD
Domain
RHD domain
PFAM
PF00554
TF Group
Beta-Scaffold Factors
Description
Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 7.6e-74 1.1e-69 235.4 0.1 1 169 130 300 130 300 0.99
2 2 0.15 2.2e+03 0.1 0.5 98 136 474 512 430 541 0.65

Sequence Information

Coding Sequence
ATGCCACCTCATGAGTGCAATGGAACTAGAGCTGATGAATGGTCGCTCATGAACGACTCGCACAAATGTGCCGGCACATATCACCGGGCTGTGAACGAACAATTCGCAATGAAAGAGGGCATCGTTCATTCCGCCATTTACACAGCGTACAAACATGAGTTTTTTAAGCACTTGATTTCTTTTTACTaTACCGCGATTCAAGATGATCAAGCCATACGAGATAATAGCAACTTGTTAAGTGATGTCATTGAAGTCATTACAACTGACCCGGACTTTACGGAGTCCACCACAAACCAAAACATGTTTAATGGAGGAGGCGAAATCTCCCAGCAACAACAGCCAACAATACAGCCACAGGCGGCTCAACAACCGAGGAGgCAACCTTATGTAAGGATAATCGAACAGCCTGCCTCCAAGGCGCTCCGGTTTCGATATGAATGCGAAGGGAGATCCGCGGGCTCCATACCCGGGGCCTCCAGTACGCCAGAGAATAAGACTTTTCCGACCATACAAATTGTCGGCCACCAAGGAAGGGCGGTCGTAGTAGTGTCGTGTGTCACTAAGGATCCACCTCATAAGCCTCATCCCCATAACTTAGTAGGTAGAGAAGGATGTAAGAGAGGAGTGTGCACGTTAGAGATACCCACCGATACAATGACCGTACATTTCTCAAATTTAGGCATACAGTGTGTAAAGAAAAAAGACATAGAACACGCTCTCAGAGTTCGAGAGGAAATTAGGGTTGATCCTTTCCGAACTGGTTTTGGTCATCGGAACCAACCCACCTCGATAGACTTGAATGCGGTGAGGTTATGTTTTCAAGTGTTCCTTGAAGGTAACGCACCCGGTAAATTTACCGAACCACTTCAACCTGTTGTCAGTGAGCCTATTTACGACAAAAAGGCCATGTCAGATCTCAATATTATTAAGCTGTCGGACTGCGTTAGTTACGTGGATGGCGGAAGGAAAGACATCATCTTACTTTGCGAGAAgGTTGCAAAAGAAGACATTCAGGTGagattttatgaagaaaacgGGGACTGGGAAGCGTTTGCCGACTTCCAACCGACTCAGGTGCACAAGCAGCATGCCATCTGGTTCAGGACCCCAAGATACAAAACAATAGAAGTGACAGAACCTGTAAAGGTATTTATTCAGCTTCGCAGACCTTCGGATAGTGCAGCGAGTGAACCCCTGCCTTTTGAACTGCTGCCCCTTGATTCAGGTAGGCCTCCATACTGGTCGTTTAGAAGAAATTTTGCCAAAAAGGCCAActacaatatatttaatactataCTCGCCCATGATGCCAAGTTGGTTGCTAAGAGACAGTTGGGTAAATTACCAGAATGTCACGAACAGCAGCAAGTGGCTGAAAATTCTGAAGCCGTCGTAAGTGTAGATGATGCACCCGAGCCTGTTGCCGCAAACGACAAGAcagatttaaatacaaattggaACGAAAAGATGGAAACTAACAACAACGATATTAAAACCCAAGAAATGGATTATGCAGATGTTGCGAAAATTAACAAAGaggataatattttaataaataacaacaacATGGAAGAAAAATCGTTCAATGAACTTATAAATCAAGTCGCAGAGCTGGATGAAATTTACTCCGATACTCAGGCACGCCTGCAAAGAGATTTGAAGGACATTGATAGACCGTCGCAACCCATACAGTTCAACGAATCGTTTGATGACGCGAAAACTTACTCCAGTTTACAGCTGGCCTTCAAAAACCCCGTTGAAATCGATCTAAAAGCTACGAATGACGTGGTGGTAGTAAGCCCAGCTAGTCCCTTGATAAACATGCCTCTGACTAATAAACGTGAGAATGAGATGGAAAAATTACCGCCGCTGCCGCCAAAGCGCACCAAAAAAATCGAGACGTACATAGGGGGCTCGATGACTAGCATCCAGCTGACCGGGAACCCATTAGAAAGTAAACTGGACCGGTCAAGTTCAACACGCAATGCCCCCGTCCGTTCACAATCGTTCAACTTACAGAGACCAAAGCCTCAGGCGGAGCTGATCCCTCCGGGGAAACGTTTGCCACCCACACCCAATTTCTCCACATTACCGAACCCGAAGAAGAGAGGTTTCTTTTCTAAACTCTTTGGTCGTAAGAGCAAGACTCCGGGACACTCTCGTGAAACTAGCGTTACTCCTTCGACTAAAAGCAACGTATTATTTTCCAGCACAAAGTCTCTCCAGGTCGACGGCAACTTGGCAAAGAGCTCCGGCAACATATCCACACATTCTGCCAACAGTATACGTATCCCATTGAAAGACAGCCCCCCGTCTAGCAACCTAAACTTGGCAACATCTAATAACTCTTTTCTGGTAGCAAATAAGATCCCAACGAATGCGATTAATGACGATTTTGACATGAATCTGGACCTGACCGAAGCAGAACATTATGCTTTATACACAACGATGGCCCCCCATGCCACCCAAAGCGAATTCGACGAAATGTCTTGTTATTACGCTCCGGTAGAAGGGGGGAAATTATTAACACCTGCGGAGGTTTTAGCGAGGTTACCGTCAAAGACTTAA
Protein Sequence
MPPHECNGTRADEWSLMNDSHKCAGTYHRAVNEQFAMKEGIVHSAIYTAYKHEFFKHLISFYYTAIQDDQAIRDNSNLLSDVIEVITTDPDFTESTTNQNMFNGGGEISQQQQPTIQPQAAQQPRRQPYVRIIEQPASKALRFRYECEGRSAGSIPGASSTPENKTFPTIQIVGHQGRAVVVVSCVTKDPPHKPHPHNLVGREGCKRGVCTLEIPTDTMTVHFSNLGIQCVKKKDIEHALRVREEIRVDPFRTGFGHRNQPTSIDLNAVRLCFQVFLEGNAPGKFTEPLQPVVSEPIYDKKAMSDLNIIKLSDCVSYVDGGRKDIILLCEKVAKEDIQVRFYEENGDWEAFADFQPTQVHKQHAIWFRTPRYKTIEVTEPVKVFIQLRRPSDSAASEPLPFELLPLDSGRPPYWSFRRNFAKKANYNIFNTILAHDAKLVAKRQLGKLPECHEQQQVAENSEAVVSVDDAPEPVAANDKTDLNTNWNEKMETNNNDIKTQEMDYADVAKINKEDNILINNNNMEEKSFNELINQVAELDEIYSDTQARLQRDLKDIDRPSQPIQFNESFDDAKTYSSLQLAFKNPVEIDLKATNDVVVVSPASPLINMPLTNKRENEMEKLPPLPPKRTKKIETYIGGSMTSIQLTGNPLESKLDRSSSTRNAPVRSQSFNLQRPKPQAELIPPGKRLPPTPNFSTLPNPKKRGFFSKLFGRKSKTPGHSRETSVTPSTKSNVLFSSTKSLQVDGNLAKSSGNISTHSANSIRIPLKDSPPSSNLNLATSNNSFLVANKIPTNAINDDFDMNLDLTEAEHYALYTTMAPHATQSEFDEMSCYYAPVEGGKLLTPAEVLARLPSKT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01014022; iTF_00721775;
90% Identity
-
80% Identity
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