Basic Information

Insect: Poecilus cupreus
Gene Symbol: Rreb1_1
Assembly: GCA_963942605.1
Location: OZ012733.1:11456419-11462404[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 7e-05 0.013 17.4 1.2 1 23 69 91 69 91 0.98

2 16 0.0002 0.038 16.0 0.3 1 23 103 125 103 125 0.98

3 16 3.7e-06 0.00071 21.4 4.0 1 23 131 153 131 153 0.99

4 16 1.4 2.7e+02 3.9 0.1 1 23 229 253 229 253 0.87

5 16 0.077 15 7.9 3.2 2 23 259 281 258 282 0.94

6 16 0.15 28 7.0 0.3 1 20 335 354 335 356 0.94

7 16 0.073 14 7.9 0.1 1 23 482 504 482 504 0.96

8 16 6.7e-06 0.0013 20.7 0.7 1 23 514 536 514 536 0.99

9 16 0.00084 0.16 14.0 3.1 1 23 542 565 542 565 0.97

10 16 0.00072 0.14 14.2 2.8 1 23 906 929 906 929 0.96

11 16 0.0011 0.21 13.7 1.4 2 23 1184 1205 1183 1205 0.97

12 16 0.09 17 7.6 4.2 1 23 1211 1234 1211 1234 0.96

13 16 0.11 21 7.4 4.0 1 20 1265 1285 1265 1289 0.94

14 16 0.27 52 6.1 0.4 1 23 1351 1374 1351 1374 0.96

15 16 0.017 3.2 10.0 0.5 3 23 1423 1443 1421 1443 0.93

16 16 0.0016 0.31 13.1 5.5 1 23 1449 1471 1449 1471 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	7e-05	0.013	17.4	1.2	1	23	69	91	69	91	0.98
2	16	0.0002	0.038	16.0	0.3	1	23	103	125	103	125	0.98
3	16	3.7e-06	0.00071	21.4	4.0	1	23	131	153	131	153	0.99
4	16	1.4	2.7e+02	3.9	0.1	1	23	229	253	229	253	0.87
5	16	0.077	15	7.9	3.2	2	23	259	281	258	282	0.94
6	16	0.15	28	7.0	0.3	1	20	335	354	335	356	0.94
7	16	0.073	14	7.9	0.1	1	23	482	504	482	504	0.96
8	16	6.7e-06	0.0013	20.7	0.7	1	23	514	536	514	536	0.99
9	16	0.00084	0.16	14.0	3.1	1	23	542	565	542	565	0.97
10	16	0.00072	0.14	14.2	2.8	1	23	906	929	906	929	0.96
11	16	0.0011	0.21	13.7	1.4	2	23	1184	1205	1183	1205	0.97
12	16	0.09	17	7.6	4.2	1	23	1211	1234	1211	1234	0.96
13	16	0.11	21	7.4	4.0	1	20	1265	1285	1265	1289	0.94
14	16	0.27	52	6.1	0.4	1	23	1351	1374	1351	1374	0.96
15	16	0.017	3.2	10.0	0.5	3	23	1423	1443	1421	1443	0.93
16	16	0.0016	0.31	13.1	5.5	1	23	1449	1471	1449	1471	0.98

Sequence Information

Coding Sequence: ATGGATGACTCGCTCAACAATACCAAAGACAGCCAAAGAAAAACCGACACAGAAGAAAGCATGTTGGAGACCAGCTCAGCATTATCTGACAACCTCTCCACCCACGAGTCCGACGTCGAACCCATGGACATCAGCAATAAAACAACAACGACCCTCGACAGCGACAACCAGAGCGACTGCAGCTCCCCTAGTAACCCCACCAAGTACTTCTGCCCGATCTGTGACATCACCTTGACATCTCAACACGATTTCACTCTTCATATTCGCTCCCACAACAACGACAACGAAATCATCTCCGATAAGGGGTTCACCTGTCGCATTTGCTCAAAGGTCCTGAGTTCGAGCTCGAGTTTGGACCGACATGTTTTGGTCCACAGTGGAGAACGTCCTTTTAGATGTAAAATTTGTTCTGTGACCTTTACTACAAATGGAAATATGCATCGACATATGAGAACTCATTCGCAAAAAACGGGAGAGAATTATGAATCTGATGCTAGCACTGATAGCAATGCCAGCATTAACTCGAATGGAAAAACAAGAAAACGACGACTTGAATTCAACAATAATAAGCTAGTAGATAATAAAAGAAAGTCTGACTGTTTTGAAGACGAAGACAATTACATGCATCGaagaaaatcgaaaaattttaacaacaataatatcAATGAAATGAACACTCAAAAATATCATTGCCCAGTTTGTGATCGCGAAGATTTTGCTTCTCtaaatgtattagaaacacatttGGAAATCAATCACCCGGATTTTGAAGTCAAATGTCTTTCTTGTAACTTGAGTTTCAAAAACCATCGAGCATTAAATCTACATCGGGATATGGTTCACCATTCAGTACAGATTCATAATGTTCAaagcaaaaatgttaaaaacgCTCACATCGGTTTTAAAGACTTGACATTTGTAGATTTTTCCAGCAATAAATTTCCTCATATCGCAAGATATGAATGTGAAAAAAATCTGCATAAACCCGTAACAGGACAAAAGTTTATTTGCGAGAAATGTTCTAGAGCCTTTCCGTGTTCAAGTGCGCTAGAAATGCATCAAGATGAATGTTTGAAACGACCAGCGAAAAATCTAGAATTCCCAACAGATTTATCTCAACGATCTACATCAGAACGAGAATCCTTTTTCGCGCATTTAGACCTTCAAAATAAATCTGGACCTACATCTCCAGCCTCACCTACACCCGAAGAACCCAAACTACCTTCAACCAAATCATCTATAGATTCCAAAGATCTAGCTGATATCCAATCAATCCTTTCCATGACATCAAACGGAAGTTTGCTACAGCATTTACGAACCAAACCTCCTTCAGAACTAATGTTGCTTCCTGCAGAAAACTTACGAACTCCTGAACAACACAACGAAGAAGAGACTCAAGATGTCTTCGCAGCAGAGTTCCGGAAGATGAAGTTAAGGGGTGAGTTTCCCTGTAGACTTTGCACCGCTGTTTTTCCAAATCTTCGAGCCTTGAAAGGTCATAATAGGGCGCATCTAACCGGAAATGGGAATTCAGGGCCGTATCGGTGCAATATGTGTCCGCATAGCTCAGTAGATAAAGCAGCTTTGATCAGACATATGAGAACACATAATGGTGATAGACCATATGAATGCTCTTTATGTAACTATGCCTTTACTACAAAAGCAAATTGTGAAAGACACTTGAGAAATCGGCACTCAAAAGTCACTAGAGAGGAAGTTAAAAAGTCAATTATTTATCATCCATCTGAAGATCCTACTAACGATGAAATCAATAAACCTAAACACACCTTTTTAAATTCATCAAACGATGAAGAGATACACCTCGCGGACAGGATGAAAAGTTCTACTCCAGACCATAAAAACATTGTTATTCCTTCTACATTATTAACAATCAACTCTCCAATACCTATCACCAAAGATCTGACTCCAATAACCATTACAAAAGAAGAGAAACCAGATTACCACTATCCAAAACAAGTTGAATTTACCTATCCTGACAAAATCAAAGACGATCTAGTTCCTTCAAAAATCCAAGTGAAAAGTTTGAGCGACCTCAGACAAATCCCGGATTACGACATTCATTCTGAAGGTGAGTCATCAAGTTTTGAGGATTACCCAAAATCTGCAGATCATCCAATAGATCTCAGCATGGACGTGTTAGACTTGAGCAAGAAGAAAGAATCTCCTCAAAAAACTGAAGAGCCTCAGGATTTCACCAAAAAGACTTTAGAAGCGATTCCTCCGCCTCCAACCGCTGCGCAATTGTTATTAGCTCAACAGTTGCTAAAACATCCTTACATGAATCATTTATCACAGTTCTATCAAAACCCTGGACTTTTTCCCAACATTCCCAACATAAATCTACAACCAAATCTGTTTCCGTTTTTGTTTCCACCGCCGTTTTTAAACACTCAAGAAATGAAAGAACGTATTGTACGTTTACAGTTAAGTGGAGGATCTATGATTAGCGAACAGTTTCCTCCAGTTCCTCCAAACGGTTTACAACCGTTTCATCCAATAACAAAACCAGAAGAAGACAAACCACCTCTTCATATTAACACCCAACTTACAGACAATGTTGTCAAGTTGCAATCGCCCAAACCTCAACAAAAGACACCGGATATGATACATAGTCCTAATTCTGTTAAAATGGTTATTAAAAATGGAGTTTTAATGCCGAAACAAAAACAGAGACGCTATCGAACTGAACGTCCGTTTTCTTGTGAGCATTGTTCAGCGCGGTTTACTTTGAGATCCAATATGGAAAGACATATTAAACAACAACATCCACAGTATTGGTCTCAAAGACAGCGAGCTGGTATAAGCGGAGCAGGGCGTAAACCAATAAACACTGCTCCTGCTACCAATACCAACAAACCACCATTCTTTGATTTAAACATCCCAAACTATGACATGCATATACCAAAGATTCCAGAATCTATAGTCAACGAAaccaaagaaaaagaaattccTCAGCATCATATACCTATATCTCAACAAGTCAAATACGCGCTGCTTGCGCAACAATTAAAAGCTCGTAACATCGAACACAACCATCTGTCAGCACCAAAAGATGATGACGAAGACGCTTTAGTAATCGATGAAGAAAACGAAGAACCCGCAAAATACGAAACCAAAGATGTTGAAATAAAACCTATAGACGTTGACATCAAACCTAAATCTCTTGATGAGAAAATGCAGGAACTGCGACAAATGCGAGAGAAGGAATTAAagatgaattttaatgaaagtgGTTTGTTGAAATTATCCAAGCCTGAGGAAGCTGGACAAGACCTAGTTCCAGTGTCTCGACTTTTGGATAATGCAGTTAGTTCGCAGTTACCTTTTCAGGAGTATTTTCGACGAGACGGTGAAGATAATGAAGCAGAAGGAGTTAGTGAAGAAGACGAAGAAGGTTTAGTTGCAAGTGGTAGCACTAGCGAAGGAAATGGTTCCGGCAGCGATGAAAATAAATCAGAAAACGAAACTGCCCAAACCAATGAACCCGGCAAAAAAAGATCTGCATATTCTTTGGCACCAAACCGTGTTAGCTGTCCATACTGTCACCGAAAATTCCCCTGGACTTCATCCCTCAGACGTCACGTGCTAACACACACAGGTCAGAAACCCTTCAAATGTTCCCAATGTCCACTTTTATTCACCACCAAATCAAACTGCGATCGACATCTACTGCGCAAACACGGAAACACCGTCAACACACCTTCCGACTCCtcaaacaacaacaacaacaacagtcAGAACTATATGATGAGGAACGTTCCAGAGAGACCATACAAATGCTCAAGTTGTCCTAGCTCGACATTTTCTACACTTAGCAATCTCAAAAAACACATGTCCTGTAaacatatgacagtttcaaCACACACAGAAGAAGCGAGACCCCCCAGTAGAGAATATGAGAGCTTGGCTAGTTCAGAAGACGAACGAGTTAACAAACCAACTGTCAGCGAAAGTAAAAGCGATTGGGAGAACcaaatttcacattcaaaaatccCTATAAATAGTTCTGAACAAACCACTGACCTCCCATTCAAATGTCATTTATGTGAAGGCTCGTATTCTGAACGCCAAGATGCTTTAGATCACATTCAAAGCGCGCATGTATCAGAATACGAGCTGCTGATGTCTAAAGGAGCATTAGACGCAAACACTTCCGGTCACGAAGAACTACCCACAGGTCACGATCCTGACGATGATGAGCAGCTTCGAGGAAAGTTCCCGGATTACGCTAACCGAAAAGTAATGTGCGCATTTTGTATGCGCCGGTTTTGGTCTGCAGAAGATCTTCGACGACATATGAGAACACACACTGGTGAACGACCGTTTTCTTGTGATATCTGCAATCGCAGATTTACTTTGAAACACAGTATGCTTCGACATCGAAAGAAACACAATATGGCGGCTAGTTCGACAGAAGATGGCGTGCTGGCCAGCGGAGAAGAAGAAGAGACGTATGAGAAGTTTGcgaaagtaaataataataataatttagtggCTGGAAATAAATCCAGTGGGGAAGATTCCGAAGGCGCTGAAGGCAATGATTTGATTGGTAATTTACTTGGTATTAGAGACAAGTCTATAATTGACCAAGTATTAGTTTCGTCAGCTGATGACGCAGCCAAGTTATTGGGTGTGAACAGCGGACAGGAATAG
Protein Sequence: MDDSLNNTKDSQRKTDTEESMLETSSALSDNLSTHESDVEPMDISNKTTTTLDSDNQSDCSSPSNPTKYFCPICDITLTSQHDFTLHIRSHNNDNEIISDKGFTCRICSKVLSSSSSLDRHVLVHSGERPFRCKICSVTFTTNGNMHRHMRTHSQKTGENYESDASTDSNASINSNGKTRKRRLEFNNNKLVDNKRKSDCFEDEDNYMHRRKSKNFNNNNINEMNTQKYHCPVCDREDFASLNVLETHLEINHPDFEVKCLSCNLSFKNHRALNLHRDMVHHSVQIHNVQSKNVKNAHIGFKDLTFVDFSSNKFPHIARYECEKNLHKPVTGQKFICEKCSRAFPCSSALEMHQDECLKRPAKNLEFPTDLSQRSTSERESFFAHLDLQNKSGPTSPASPTPEEPKLPSTKSSIDSKDLADIQSILSMTSNGSLLQHLRTKPPSELMLLPAENLRTPEQHNEEETQDVFAAEFRKMKLRGEFPCRLCTAVFPNLRALKGHNRAHLTGNGNSGPYRCNMCPHSSVDKAALIRHMRTHNGDRPYECSLCNYAFTTKANCERHLRNRHSKVTREEVKKSIIYHPSEDPTNDEINKPKHTFLNSSNDEEIHLADRMKSSTPDHKNIVIPSTLLTINSPIPITKDLTPITITKEEKPDYHYPKQVEFTYPDKIKDDLVPSKIQVKSLSDLRQIPDYDIHSEGESSSFEDYPKSADHPIDLSMDVLDLSKKKESPQKTEEPQDFTKKTLEAIPPPPTAAQLLLAQQLLKHPYMNHLSQFYQNPGLFPNIPNINLQPNLFPFLFPPPFLNTQEMKERIVRLQLSGGSMISEQFPPVPPNGLQPFHPITKPEEDKPPLHINTQLTDNVVKLQSPKPQQKTPDMIHSPNSVKMVIKNGVLMPKQKQRRYRTERPFSCEHCSARFTLRSNMERHIKQQHPQYWSQRQRAGISGAGRKPINTAPATNTNKPPFFDLNIPNYDMHIPKIPESIVNETKEKEIPQHHIPISQQVKYALLAQQLKARNIEHNHLSAPKDDDEDALVIDEENEEPAKYETKDVEIKPIDVDIKPKSLDEKMQELRQMREKELKMNFNESGLLKLSKPEEAGQDLVPVSRLLDNAVSSQLPFQEYFRRDGEDNEAEGVSEEDEEGLVASGSTSEGNGSGSDENKSENETAQTNEPGKKRSAYSLAPNRVSCPYCHRKFPWTSSLRRHVLTHTGQKPFKCSQCPLLFTTKSNCDRHLLRKHGNTVNTPSDSSNNNNNNSQNYMMRNVPERPYKCSSCPSSTFSTLSNLKKHMSCKHMTVSTHTEEARPPSREYESLASSEDERVNKPTVSESKSDWENQISHSKIPINSSEQTTDLPFKCHLCEGSYSERQDALDHIQSAHVSEYELLMSKGALDANTSGHEELPTGHDPDDDEQLRGKFPDYANRKVMCAFCMRRFWSAEDLRRHMRTHTGERPFSCDICNRRFTLKHSMLRHRKKHNMAASSTEDGVLASGEEEETYEKFAKVNNNNNLVAGNKSSGEDSEGAEGNDLIGNLLGIRDKSIIDQVLVSSADDAAKLLGVNSGQE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01275656;
90% Identity: -
80% Identity: -