Basic Information

Insect: Poecilus cupreus
Gene Symbol: -
Assembly: GCA_963942605.1
Location: OZ012732.1:5431672-5434383[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00076 0.15 14.2 4.7 1 23 181 203 181 203 0.98

2 11 0.03 5.8 9.1 9.6 1 23 209 231 209 231 0.93

3 11 1.3e-05 0.0024 19.8 5.3 1 23 237 259 237 259 0.98

4 11 0.00042 0.08 15.0 2.5 1 23 265 287 265 287 0.95

5 11 3.6e-06 0.00069 21.5 0.8 1 23 293 315 293 315 0.97

6 11 1.6e-06 0.00031 22.6 0.2 1 23 321 343 321 343 0.97

7 11 0.00021 0.04 15.9 1.7 1 23 348 370 348 370 0.97

8 11 1.7e-06 0.00033 22.5 1.2 1 23 376 398 376 398 0.97

9 11 0.0011 0.21 13.6 0.0 2 23 405 426 404 426 0.96

10 11 0.00053 0.1 14.7 3.1 1 23 478 500 478 500 0.96

11 11 0.0005 0.095 14.8 6.9 1 23 510 532 510 532 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00076	0.15	14.2	4.7	1	23	181	203	181	203	0.98
2	11	0.03	5.8	9.1	9.6	1	23	209	231	209	231	0.93
3	11	1.3e-05	0.0024	19.8	5.3	1	23	237	259	237	259	0.98
4	11	0.00042	0.08	15.0	2.5	1	23	265	287	265	287	0.95
5	11	3.6e-06	0.00069	21.5	0.8	1	23	293	315	293	315	0.97
6	11	1.6e-06	0.00031	22.6	0.2	1	23	321	343	321	343	0.97
7	11	0.00021	0.04	15.9	1.7	1	23	348	370	348	370	0.97
8	11	1.7e-06	0.00033	22.5	1.2	1	23	376	398	376	398	0.97
9	11	0.0011	0.21	13.6	0.0	2	23	405	426	404	426	0.96
10	11	0.00053	0.1	14.7	3.1	1	23	478	500	478	500	0.96
11	11	0.0005	0.095	14.8	6.9	1	23	510	532	510	532	0.97

Sequence Information

Coding Sequence: ATGTGTGTGAACTCTGTATCGAACAGAACTAGTTTAAGTGCAGTGGGAGGCTTATTTCAGGTTATGTTAGATGCTATGGGCTATGGAAATACTCCTAATTTAACCGGTACCTTCGGGTACTGGCATCCAGCCGATACTCACACAACCCCTACATCAAGTATAACAGACTCTTCATCGTTAAGTTGTTATGGTCCACCCAGTATTCTGCAAGATGCATCCAAACTCAAAGCCGTGCGTCGACCGATGTTCCTGGTGAACAACAAGCATGCCCAAGATGTATTCGCGAACAACACATGCGAGAAAGGCTGTCCGTGTGAACCAGTTCCAATTTCATTCGGGGAGAAAGAAGGCAAACATTTCATGACGCCATTAGGTCCATTACAACTTACCGCTGAGGAGTGTAACGAGATACTAATGAAACGTGCTGCAGCAGCTGCTGGGGGTACCAACCAGAACCAGATCCCTTCGCACCCGCCGCAGAGCCCTCCGGAGAGCAAGCCGCTGCCCCAGCCGCCCGCCCCGCCTGCCAAGATCCGGCCGTACTCGTGTCTGGAGTGCGGCAAGTCCTTCCTCCTCAAGCACCACCTCACCACGCACACCCGGGTGCACTCGGGCGAGCGGCCGCACGTCTGCATCCACTGCGGCAAGACCTTCGCCCACAAGCACTGTCTCAATACTCATCTGCTCTTGCACTCGAGCCAGAGGCCCTACCAGTGCCCCGAGTGCAAGAAGAGCTTCACGCTCAAGCACCACCTGCTGACGCATTCGCGAGTTCACAGTCGCGAACGTCCTTTTATTTGCACGGAGTGCGGCAGGACATTTCCTCTTAAGCGGCACCTGGTGACGCACTCCAAGTTCCACGCCGGGGAGCGGCCATTCGTTTGTGAAGACTGTGGTGAATCGTTCGCGCAGAAGGATCATCTTGTGATGCACTCTCGATTCCATGGCTCACTCAATCCGTTCGTGTGTCCGGACTGTGGCGCCACTTTTACACGTAAATTTGAGCTGGTGAATCATGGACGGCTACACGGAAGGTTACCACACAGTTGTCCTGTTTGTAACAAGGAGTTTCTGCAGAAGAGGACGCTGGTAGCGCATATGAGGTTTCACTCAGGAGACCAGCCATTCTCATGCGTACAATGCGGCGAATCATTCAGATCAAAATCCGAATTAACCCAGCACACAAAGCTGCACTCGCCAGACCGACCCCTGTCGTGTCGCGAGTGCGGCAGCGCGTTCAACAGCCCCGAGGCGCTGGCCTTGCACGTCCGTTTGCACTCTGGTGATTCCGCATTGGTAACAGATCTGTGTGCACTAACTGCCTCTCTGCAATCCTCAGGCGGGTTCTCGCTGAGCGTGCCGCAAGCCAACAGCTCGGCCGCGCCGCAGACACCGATACCTCCGCCTGCGAACGGCGTCAAGCAGAAGAACCACATCTGTCCGCACTGTGGGAAGGCGTTCGCAGCGAGGCATGGGCTCCTGCAGCACAATAAGCGGCATCCTGGCGGGGGGTGTACCCTCAGAGCGCATGTTTGTCCTACGTGTCATAAAGGATTCTTCCAGAAGAACCATCTGCTGCTGCATCAGCGACAACATATGGAACAACCGCGACAACCTGGACCTGCTAATGTTGCTGCGcaacagcaacaacaacagcagcagcagcaacaacaacagcagcagcaacaacaacagcaacaacaacaacaacaacagcagcaacaacaacagcagcagcagcaacaaCATCAGCAGCAGGTGGTGCAGAATCAGCAGCTACAGTAA
Protein Sequence: MCVNSVSNRTSLSAVGGLFQVMLDAMGYGNTPNLTGTFGYWHPADTHTTPTSSITDSSSLSCYGPPSILQDASKLKAVRRPMFLVNNKHAQDVFANNTCEKGCPCEPVPISFGEKEGKHFMTPLGPLQLTAEECNEILMKRAAAAAGGTNQNQIPSHPPQSPPESKPLPQPPAPPAKIRPYSCLECGKSFLLKHHLTTHTRVHSGERPHVCIHCGKTFAHKHCLNTHLLLHSSQRPYQCPECKKSFTLKHHLLTHSRVHSRERPFICTECGRTFPLKRHLVTHSKFHAGERPFVCEDCGESFAQKDHLVMHSRFHGSLNPFVCPDCGATFTRKFELVNHGRLHGRLPHSCPVCNKEFLQKRTLVAHMRFHSGDQPFSCVQCGESFRSKSELTQHTKLHSPDRPLSCRECGSAFNSPEALALHVRLHSGDSALVTDLCALTASLQSSGGFSLSVPQANSSAAPQTPIPPPANGVKQKNHICPHCGKAFAARHGLLQHNKRHPGGGCTLRAHVCPTCHKGFFQKNHLLLHQRQHMEQPRQPGPANVAAQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHQQQVVQNQQLQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01041165;
90% Identity: iTF_01275621;
80% Identity: -