Pcup010607.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Poecilus cupreus
Gene Symbol
ZNF236
Assembly
GCA_963942605.1
Location
OZ012714.1:36914704-36920162[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 25 0.0016 0.3 13.2 3.7 1 23 151 173 151 173 0.98
2 25 0.33 64 5.9 0.2 1 23 179 201 179 201 0.92
3 25 7.9e-06 0.0015 20.4 0.3 2 23 207 228 207 228 0.97
4 25 0.0078 1.5 11.0 0.3 1 23 234 256 234 256 0.95
5 25 2.6e-05 0.005 18.8 1.9 2 23 268 289 267 289 0.96
6 25 2.9e-06 0.00054 21.8 1.1 1 23 314 336 314 336 0.99
7 25 1.7e-06 0.00032 22.5 0.7 1 23 342 364 342 364 0.98
8 25 6.9e-05 0.013 17.4 1.4 1 23 370 393 370 393 0.97
9 25 0.0008 0.15 14.1 2.4 1 23 403 426 403 426 0.97
10 25 1.5e-05 0.0028 19.6 1.4 3 23 515 535 513 535 0.96
11 25 0.00071 0.14 14.3 3.6 1 23 541 563 541 563 0.98
12 25 3.6e-05 0.0068 18.4 1.2 2 23 570 591 570 591 0.98
13 25 0.00094 0.18 13.9 3.8 1 23 596 618 596 618 0.97
14 25 1.7e-05 0.0032 19.4 3.9 1 23 667 689 667 689 0.98
15 25 0.00066 0.13 14.4 2.9 1 23 695 717 695 717 0.99
16 25 1.9e-06 0.00036 22.4 1.2 1 23 723 745 723 745 0.98
17 25 0.26 50 6.2 4.5 1 23 751 773 751 773 0.95
18 25 0.0088 1.7 10.8 1.9 2 21 1118 1137 1117 1138 0.94
19 25 7.2e-08 1.4e-05 26.8 1.7 2 23 1194 1215 1194 1215 0.98
20 25 8e-05 0.015 17.3 1.0 1 23 1221 1243 1221 1243 0.98
21 25 0.00034 0.064 15.3 3.5 1 23 1249 1271 1249 1271 0.98
22 25 0.00076 0.14 14.2 2.4 1 23 1277 1299 1277 1299 0.98
23 25 0.00057 0.11 14.6 0.7 2 23 1448 1469 1447 1469 0.96
24 25 7.3e-07 0.00014 23.7 1.7 1 23 1475 1497 1475 1497 0.98
25 25 7.7e-05 0.015 17.3 1.9 1 22 1503 1524 1503 1524 0.95

Sequence Information

Coding Sequence
atGAATATAAGCAACACAGTTCCtatcatacaaaataatgatAACGAAACTGTAACATTAATAGCTTTaccacttcaaatatttcaacaagCGACTCAACAGTCACTTATTGTAGAACAaaacttattatttaaaactctaCCTGATGGAACTTTTATGTTAGATACTAACCAGCTTTTAAATGGAAATAGTAACATTGCACTAACAGAACAAGATCCAAATTTAAGCAACGAAAAAAATTTGGATACTCCTGAGCAACTAATTTATACATTACAACCAAAAACTGATGCACCCATTCAGACGAATCAGACAGAGGACCTAAATAAACTCAACGAcgataaaaaatctaaaatacgATATCTACATAGTAAATCTTCAGTGGATGTTCGAAAAGTTGGTAGACCTCGAAAAGATagcacaaaaacaaaagttacagATAATAATgggccattcaaatgtaaaatatgcgACAAGGAGTTTAAcaaattcttattatttaaaAGACACGAAAAATCTCACATGAACGAGAAAAAATACAAGTGTCCTTCTTGTCCAGCTAcctttaatattttatccAATCATATACTGCATTTAGCTATACACAAAAAAGAAGATCCAACATGTCCAGAATgtggaaaaaagtttcaaagaaTTGCCAGTTTAAAAGCTCATATGATGTACCATGAAAAAACGGAAAATTTTTACTGCGAAGAATGTGATCTCTCCTTTAATAACGAaattgaTATGAATGAACATAGTAAAGACCACGGACAAGATAAAAAAGTAGAAGCTGATACATTACAATGTAAATATTGCCAACTTACTTTTACAAATCAAGTAGAATTTAAGAAACATATGAGCGAACATAATAAAATGAGAAGTATTTTACAAACATCACCACGAAAAAAACCTCGAAAAACTACAACAGTCGAAAGGAAGTATcaatgtaatatttgttcaaaagcATTTCAAAAACGAAGTCAGATTGAAAGGCATATGAGAGTGCACAGTGGAGAAAAACCATACATTtGCAAAATTTGTAACCGAGGGTTCAGTCAAAAAGGATCTCTTCAAATTCACATGACTCGTCATACTGGTGTTAGGCCCCATAAATGTGCTTTATGTCAAGCTAAATTTAGTCAAAAAGgGAATTTGCGTGCACACATTTTAAAAACTCATTCAATACCTCACGACGGAGAAAACGTGTTTTCTTGTACAGAATGCTCTTGCGTATTTAAACGTTTAGGAAGCCTCAACGGTCACATGACTCGAAACCAtccaaaagaaaaaaatagcgACATTAAATATGTCATATCTCAATTAGCTGCCATGCAGGGCAACATGGTCGTAGATAACGACATTCTTCAACAAGCAATTCTAAAATCAGATCTCCCAGAAGTACAAAATCAAAAccaaaataatgataaattagACGATACTCCAACAGCGACGTATGTAACTTTAGCGGATTTGGGATTGGATGGCAATATGCGACGATATGTTATCAAACAAAGAAGAGTTGGAGATATTCGATGGCATTTATGTTCGTTTTGTCCGAAAGAGTTTAAAAAACCATCGGATTTAGTTCGACATCTTAGAGTTCATACTAGAGAGAAGCCTTACATGTGTAAATTGTGTTGTCGGTCATTTGCAGTAAAGTCTACGCTTACAACTCATATAAGGACTCATACAAAATGCATCAAAGCACAATGTtcatattgttataaatttttcaattcctGGACTGGTTTAAGAGCTCATATGTCGAAACATACAAGCCAGAAACACAAATGTTCTGTATGCAATAAATCTTACAGAAGTACTGGGAAACTGAATCAACATTTTCAAGTGCATTTAAATAATCATCCTTCGTATTTTAAAGAACCGAACAGTAATGTAATTATGTTGCAACCTATACAGATAACAAATAAAGGTCTACAGCCTGTGTTGTCTTTAAGAAAGCGTCCTTTAATGGAAGCAGGCTCTAGAAATCGACCATATACTTGTAAAGTTTGTGGAGCTGCGTTTAGACGACTAAGCCATTTAAAACAACATCATATAAAACATACCGGCGAACGGCCATTTCGGTGCCATTTATGTTACAGAAGTTTCgcatcaaatagtatattaaaaactCACATATTAACACACAACGGTACAAAACCATATAAATGTGTAATCTGTCAAAAGAATTTTTCCACTAACGGAAGTTTAAAGCGGCATTTAGAATCGCACAGTAATGCAAAACCATTTTTATGTCCCTATtgttttaaggattttaaaaatatattgcaatgtCGAAAACATATGACAACACATAATATAGAGTTAAACGTGGAAATGGAAACAAATGATCAATGTGGATTAACAGATGACTTATCGTATCCGCCTGATTTGGCGGATACGTTAGTCGACGATCCGTTTTCTTTGGTTCAACCGTTATCACAACCGTGTTTGGACGACCCAGATCAACAAATAGATGAAGTTCATACATCAAATTCATTAGTGACTCAAACTTTACGAGCAGACGAAAGTGGAACTGTTGTTCTACCAGTCATTGCAAATCAGGAAAATTTAACTCAAGAGAATATGCGAGAAATAGAAGACACGTTGAATTCgcaaatgttaaatataatagGCAATGAAAATTTCGTAGATTCTTCTAcgtatatcaataaaataaatgcatCTGATCCGATTCCAACAACTGACGAATTAGTCAGCACTTTATCTGGAACCACTGGTAcggaaaaaacaattgaagataatTCTTTTCTATACCATCAAGTCATTGTCAATTTAAATCCGGAATCCGAACAAATGCCGATATTTGATAACAATGgaattgaaaacattttatCTCAAGTTAAACTACAAAACGAATCACTatttttaacagatttaaactccttgaacattaataatattaatgttaatgaaacaaataatgttttattgcCATTTCAAATTGCACCTCAACAAGATTTACaacaaaatcaattaataatgtTGCCTCCAGAAATTGAACAAGAAATACAAAGTTCCGCTCTTAATTCATCAGTTACTCTAGATAATATCGatcaaaatttacaattaaagttAAATGCTCTAAATGGTTTTTTGGATGCCGaacaaaatatttctgaaacaaatattgaaatggaaaCTCGAACAGAATTTTTAAACTCCGATGAAGATATTATTACCGACGCGATACCAAACGTCAATGTAAATGTAGCTTCTTTACcaacaaaaacaattgaaaatagtATTATTACTGATGTCATAACAACTGACAATCAGGTGACTGCTGTTATTCCTGCGGACATAATCACGGAATCCATAAATGTAACTTGTAATTTATGTAAACTTCAATTCAAatctaaaaatgatttgaaaattcatcaatgtttgaattttataaatgttcaaGTAAGCAGTCCTGATATTGATACTAATATTGATACTGTAGAAACAGTTAATTCTGGTACTGTTACCAAAGAAGTGTTTGATGaattaatttcacaaaaagAAAAAGATCCTCTTGAATTCAAAAAACCTACTCCAGTTTACAAAAATACGTGCACTTATTGTCCAAAAACTTTTCGAAAACCTTCAGATCTCCAAAGACATCTTAGAACTCATACGGGGGAAAGGCCTTTTAAATGTGACGAATGTGCTAAAAGTTTTTCTTTAAAGTCGACTTTAGAGAGTCATAGTAAAATACATCAAGGTAGAAAAGAATTCACGTGCCATGTTTGTAACTGTTTATTTGCGACTAAAGGAAGTTTAAGCGTTCATATGCGGTTACATACTGGAATTAAGCCTTTTAAATGTCCTTTATGTCAATTAAAATTCCGGACCTCAGGCCACAGAAAAGCTCATTTAACGGTTCATTTTAAAGAAGCCTTACGAACAGGAAAAACGCCGTCGGATGTTGTTACACGAAAAGCAAAAATGACTGAATTGATGGAAGGTGTACAAAATATGATTGATTTGGATCTCACGGGAAAACAAACAGAAAAAGAAAGTGATCCTCAGATTCCACTAGAAAATATTTCTGTAGGCCCTTCATTGCAAATAACTCAACCAGTTGTAGACAACATCGTCTTGCAAACTGACGAAAAACCATTAATGCATTTCGAAATCGAAACAAACACTCAAGGacaaattatcaatattaaacCTACAGCATCAAATATTGTATTTGTTGATGATACTTCTAAAGAAGAAATTGTATCTACGCAAGTGGAATTCGACGAAAAGACAAAATTGCAAATAGAAAATTTCCTGCGAGATAAAAAAGCAAAGCAACACGAAGTCAAACATAGAATTAAGAAAGTGTGTAATGTGTGTAATAAAGAATTTggtactaaatatttattagataggCATAGCAAAATTCACACGGGCGAGCGTATATTTTCTTGCAATTATTGTTCAAAGACATTCAACCAGAAAAACGCATTACAAGCTCATGTTAGAACGCATTTAGGAAGTAAACCTTTTTGTTGTCCATATTGTTGGAATACTTTTAGTCAAAGTGGAAATTTGAAAACTCATATAAAAAGGTTCGTTAAAACAATGGATGGTTCCACGAGCTCTGTGTTTGGGTGTTTTAACAGAAGTGTGTTAGCCTTCAAAGAAaagttgtag
Protein Sequence
MNISNTVPIIQNNDNETVTLIALPLQIFQQATQQSLIVEQNLLFKTLPDGTFMLDTNQLLNGNSNIALTEQDPNLSNEKNLDTPEQLIYTLQPKTDAPIQTNQTEDLNKLNDDKKSKIRYLHSKSSVDVRKVGRPRKDSTKTKVTDNNGPFKCKICDKEFNKFLLFKRHEKSHMNEKKYKCPSCPATFNILSNHILHLAIHKKEDPTCPECGKKFQRIASLKAHMMYHEKTENFYCEECDLSFNNEIDMNEHSKDHGQDKKVEADTLQCKYCQLTFTNQVEFKKHMSEHNKMRSILQTSPRKKPRKTTTVERKYQCNICSKAFQKRSQIERHMRVHSGEKPYICKICNRGFSQKGSLQIHMTRHTGVRPHKCALCQAKFSQKGNLRAHILKTHSIPHDGENVFSCTECSCVFKRLGSLNGHMTRNHPKEKNSDIKYVISQLAAMQGNMVVDNDILQQAILKSDLPEVQNQNQNNDKLDDTPTATYVTLADLGLDGNMRRYVIKQRRVGDIRWHLCSFCPKEFKKPSDLVRHLRVHTREKPYMCKLCCRSFAVKSTLTTHIRTHTKCIKAQCSYCYKFFNSWTGLRAHMSKHTSQKHKCSVCNKSYRSTGKLNQHFQVHLNNHPSYFKEPNSNVIMLQPIQITNKGLQPVLSLRKRPLMEAGSRNRPYTCKVCGAAFRRLSHLKQHHIKHTGERPFRCHLCYRSFASNSILKTHILTHNGTKPYKCVICQKNFSTNGSLKRHLESHSNAKPFLCPYCFKDFKNILQCRKHMTTHNIELNVEMETNDQCGLTDDLSYPPDLADTLVDDPFSLVQPLSQPCLDDPDQQIDEVHTSNSLVTQTLRADESGTVVLPVIANQENLTQENMREIEDTLNSQMLNIIGNENFVDSSTYINKINASDPIPTTDELVSTLSGTTGTEKTIEDNSFLYHQVIVNLNPESEQMPIFDNNGIENILSQVKLQNESLFLTDLNSLNINNINVNETNNVLLPFQIAPQQDLQQNQLIMLPPEIEQEIQSSALNSSVTLDNIDQNLQLKLNALNGFLDAEQNISETNIEMETRTEFLNSDEDIITDAIPNVNVNVASLPTKTIENSIITDVITTDNQVTAVIPADIITESINVTCNLCKLQFKSKNDLKIHQCLNFINVQVSSPDIDTNIDTVETVNSGTVTKEVFDELISQKEKDPLEFKKPTPVYKNTCTYCPKTFRKPSDLQRHLRTHTGERPFKCDECAKSFSLKSTLESHSKIHQGRKEFTCHVCNCLFATKGSLSVHMRLHTGIKPFKCPLCQLKFRTSGHRKAHLTVHFKEALRTGKTPSDVVTRKAKMTELMEGVQNMIDLDLTGKQTEKESDPQIPLENISVGPSLQITQPVVDNIVLQTDEKPLMHFEIETNTQGQIINIKPTASNIVFVDDTSKEEIVSTQVEFDEKTKLQIENFLRDKKAKQHEVKHRIKKVCNVCNKEFGTKYLLDRHSKIHTGERIFSCNYCSKTFNQKNALQAHVRTHLGSKPFCCPYCWNTFSQSGNLKTHIKRFVKTMDGSTSSVFGCFNRSVLAFKEKL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01275569; iTF_00029522;
90% Identity
-
80% Identity
-