Pcup043689.1
Basic Information
- Insect
- Poecilus cupreus
- Gene Symbol
- Bgb
- Assembly
- GCA_963942605.1
- Location
- OZ012727.1:2677766-2703962[-]
Transcription Factor Domain
- TF Family
- CBF
- Domain
- CBF_beta domain
- PFAM
- PF02312
- TF Group
- Beta-Scaffold Factors
- Description
- Core binding factor (CBF) is a heterodimeric transcription factor essential for genetic regulation of hematopoiesis and osteogenesis. The beta subunit enhances DNA-binding ability of the alpha subunit in vitro, and has been show to have a structure related to the OB fold [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-47 3.3e-43 148.8 0.2 1 98 35 129 35 141 0.88 2 2 2.6e-33 7.2e-29 102.2 0.0 93 162 253 322 240 326 0.96
Sequence Information
- Coding Sequence
- ATGCACCACCCCATGAACGACCCCACAGCAGCCCTGGCCGGAATGTTACCGTTCGAATCAATCGGATTATACGAACAGCCAAAACCGcggttcatttttaaaatgccGCGAGTTGTTCCAGATCAGAAAGCGAAGTTTGAGTCGGACGAACTGTTCAGGAGACTCAGTCGAGAAAGTGAGGTACGATACACGGGGTTCCGAGATCGGCCACAAGAAGAGCGCCAAGTGCGGTTCCAGAACGGCTGCCGTGAAGGACACACGGAAATCGCGTTCGCCGCCACTGGAACCAACCTGCAGCTCGTCTTCGCCGCGCCCAACTCCGCGGGGTACCAACAGGACCGCGAGTGCGACTTCGACAAGGAGCATGGAAAGTTCCAAGCTGCCGTGGCTGTTGTCGGTCTGCACGTCGATGTTGATGGCGAACAATGCGCCGTCGCGTGCCCACAGGGCGCCGACAACAACTCGCGGCCTGCGCCAATTATATGCACGCTCGGCACGCGACCGTCTTTTGTCTTTACAAAGCACTCTTTATGCACCAGGCTCCGCTTTATAAACATCGCGCTCCTTGGTGAAACCGTAACATCCGAGCATCGAACAGCCGGACAGAAAAGTCCAAATTTCCTCCACATGTCGACTGGCGCGTGCCCGCCGGCTGTCACACCATCCATCCTCATCGTCTCCTTCTGGTTCTTCAGGCCGTCTTGGCGTGTGCGTGAACCGTGCGTGCCTCACGCTCCCGTCACGCTACCGAGCGTGAAAGTACACATCCGAGCATCGTTCATCATGAACGGCGTGTGCGTCCGATGGAGAGGTTGGCTGGACCTGGAGCGCCTGGACGGCGTCGGCTGCCTGGAGTATTGCGAGGAGCGTGCCGCCGCTGAAGATGCGCTTCTGCGTGAACAGATCGACCGCTACAACCAACGCCTGCGCGAGTTTGAAGACAAGCAGCGGGTGTATCGAGCGGGGGCAGCAGCGGCGCCCACAGTGCCCCAACAGGGGCATCATGAGCGGGGGCAACCCGATCAGGACCTTGAGGATTTGGCTAGTGATGATGAGATCAGGAACTCTGCTGGCTACAAAGGGGATGAAACAACCCTTCCCGTCTGTTTGCAGTCGGACTATCGCGTATTTGAGTCCGATAATAGCATTCCGAGGGGGCGCGCTGTGCAGTCTAATTGA
- Protein Sequence
- MHHPMNDPTAALAGMLPFESIGLYEQPKPRFIFKMPRVVPDQKAKFESDELFRRLSRESEVRYTGFRDRPQEERQVRFQNGCREGHTEIAFAATGTNLQLVFAAPNSAGYQQDRECDFDKEHGKFQAAVAVVGLHVDVDGEQCAVACPQGADNNSRPAPIICTLGTRPSFVFTKHSLCTRLRFINIALLGETVTSEHRTAGQKSPNFLHMSTGACPPAVTPSILIVSFWFFRPSWRVREPCVPHAPVTLPSVKVHIRASFIMNGVCVRWRGWLDLERLDGVGCLEYCEERAAAEDALLREQIDRYNQRLREFEDKQRVYRAGAAAAPTVPQQGHHERGQPDQDLEDLASDDEIRNSAGYKGDETTLPVCLQSDYRVFESDNSIPRGRAVQSN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -