Pnob065394.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Poecilobothrus nobilitatus
Gene Symbol
Hr39
Assembly
GCA_947095535.1
Location
OX352774.1:173169475-173172654[-]

Transcription Factor Domain

TF Family
SF-like
Domain
zf-C4|SF-like
PFAM
AnimalTFDB
TF Group
Zinc-Coordinating Group
Description
The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 0.021 5e+02 1.8 1.3 26 77 12 68 6 108 0.63
2 5 1.5 3.4e+04 -4.3 10.6 43 173 183 315 173 358 0.53
3 5 3 7e+04 -5.3 7.7 25 67 438 479 399 518 0.50
4 5 2.9e-09 6.7e-05 24.4 0.0 1 37 581 621 581 629 0.79
5 5 4.3e-73 1e-68 234.6 14.8 77 408 628 925 606 925 0.84

Sequence Information

Coding Sequence
ATGTTAACAAATGATGGGGATTCATCCCCaccacaacaacaacaacaacaaacatcatcagtatcatcatcatcattattaaatagtattaatccaacaactgttattaatggtccaaattcaataaataatagcaattcagcacaacaacaccaacaccatcatcatcatcatcatcatcaaataacTGGTACGCCACATTCAGCCATTATTCGTAATAATATTTCTGTAACAAATATAAAATGTGAAGATGATTCAATTTCAAATGGATTAATAGGGAATCCAACATCATCAACTAATAATTATTATAACGGGTTAGGTCAAAATGTTGCAACAACAACAACAATAGGTGGTAATGGTGGTAGTGGTGGTGCTAGTATTAGAATTGCAGTGCCTAAAGTTGAAGAATCTGATGATGAATCAGAATCAGAACTTTCTAATATTGAAAATTTAAAAGTAAGTCGACGTTCTAATTTAAATAAAAATAATGGTCCAAGACCGATGTCATGGGAAGGTGAATTATCTgaaaatgaaaatgaattaatggaaacagatcaaaatcatcattcacatcataatcatcaccatcatcatcatcatcatcatcataaaaatattaataataacaataataatcatcatcatgcaccaatgtgtattataaaagaagaaCCAAAAGCATTAAGTGAATATGATTCAATAAATTTATCACAATCAATAACAAATGTTAATAGCGGACCATTAATATCACCTTTAAATATATCAAATAACAAAAAATTTCAACCACAAAATGAAATTTTAAATTTAAAATATGAACCAGGTACAACAAATTATATTGATAATTCACCAACAACAACAACAACACAAACAACAATAATTGGACCTGGTAGTGGAGGAAGTGGTAATGGTGGTGGTAATAGTGGTGTTAATTCACCTTTATTAGCTAGATCAAAAGTTCAATCACAATTGTTACCTGCTAATCCAAGTCCAGATTCTGCTATTCATTCCGTGTACACTCATAGTTCACCTAGCCAATCACCATTAACTTCACGTCATGCTCCATATACACCATCATTAAGTCGTAATAATAGTGATGCATCGCATAGTAGTTGTTATTCATATAGTTCTGAATTTAGTCCAACACATTCACCTATCCAAGGTCGTCATAATATTTATGGTGGCAATGGTacaacatcatcagctgttgcagctgcagcatctgctgctattaattcaaataatggccaacaatttattcattccattttatatagaccaatgcatgaaaatttagacaataatggtcaacatcagcagcaacaacaacagcagcagcagcaacaacaatcacaacaacttttaataaaaaaacaagaacaattaggtattgttacatcacaattgaattcagcgaattcaaatagctctaattcaacaaatAGTAATAATTTACAAACAAATGATGTATTAATTGATAGCGAATCAGGTATACCATCACCTGGTATCTCAAGGCAACAATTAATTAATAGTCCATGTCCAATATGTAATGATAAAATATCTGGTTTCCATTATGGTATTTTTTCTTGTGAATCATGTAAAGGTTTCTTCAAAAGAACTGTACAAAATCGTAAAAATTATGTTTGTGTACGTGGCGGTCCATGTCCAGTAACAATTTCAACACGTAAAAAATGTCCAGCATGTCGTTTTGATAAATGCTTAAATAAGGGTATGAAATTAGAGGCAATTCGTGAAGATCGTACAAGAGGTGGACGATCAACATACCAATGCTCTTATACATTACCAAATCCATTAATTATGTCAGATGGCACATCAGCAAATGTATTACAAGCTAATGCCAGAATGAATGGTTGTGTTATAAATTCAGAAGCAAGTTCAGATTCAAATAGTATTGGTGGAAGTTCAACTTCACAAAGAAGTAATCCAATTCCACAATTATTGCAAGAAATTATGGATGTTGAACATCTATGGCAATATAGTGAAGCTGAATTACAACGTTTAAATCAACCGGTTATTACAAGTGGTAATTCTTCTACAACAACATCAGCTTCAGATAGAAATACACCATCAACATCAGCAGGAGGTATAAGTCCAACTGCAACAACTGCTAATATAACTTCTAATCCACTACTGGCTAGTGCTGGTCTATCGTCGAATGGTGAAAATACAAATCCAGATTTAATAGCTACTTTGTGCAATGTTGCAGATCTTCGTCTTTTAAAAATTGTTAAGTGGTGTAAAAGTTTACCACTTTTTAAAAATATATCGATTGATGATCAAATTTGTCTTCTTATAAATTCATGGTGTGAGTTGTTGTTATTTTCATGTTGTTTTAGATCTTTATCATCACCTGGTGAAATTAAAATATCTTTAGGCAAAACTGTTACATTAACACAAGCTAAAACTAGTGGATTACAGGCTTGTATTGAAAGAATGTTAAATTTAACAGAACATTTAAGACGTTTACGAGTAGATCGTTATGAATATGTGGCCATGAAAGTAATTGTACTTTTACAATCTGATACGACTGAACTTCAAGAACCAGTTAAAGTACGAGAAAATCAAGAGAAAGCATTACAAGCATTACAAGCTTATACATTATCACATTATTCTGATAATCGATCAAAATTTGGTGAATTATTATTACGAATACCAGAATTACAAAGAACTTGCCAGCTTGTTAAAGAAATGCTACTAATTAAATCAAAAGATGGTGAAGATTTTAATTTACTTATGGAACTTTTACGTGGTGAACATTAA
Protein Sequence
MLTNDGDSSPPQQQQQQTSSVSSSSLLNSINPTTVINGPNSINNSNSAQQHQHHHHHHHHQITGTPHSAIIRNNISVTNIKCEDDSISNGLIGNPTSSTNNYYNGLGQNVATTTTIGGNGGSGGASIRIAVPKVEESDDESESELSNIENLKVSRRSNLNKNNGPRPMSWEGELSENENELMETDQNHHSHHNHHHHHHHHHHKNINNNNNNHHHAPMCIIKEEPKALSEYDSINLSQSITNVNSGPLISPLNISNNKKFQPQNEILNLKYEPGTTNYIDNSPTTTTTQTTIIGPGSGGSGNGGGNSGVNSPLLARSKVQSQLLPANPSPDSAIHSVYTHSSPSQSPLTSRHAPYTPSLSRNNSDASHSSCYSYSSEFSPTHSPIQGRHNIYGGNGTTSSAVAAAASAAINSNNGQQFIHSILYRPMHENLDNNGQHQQQQQQQQQQQQSQQLLIKKQEQLGIVTSQLNSANSNSSNSTNSNNLQTNDVLIDSESGIPSPGISRQQLINSPCPICNDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCVRGGPCPVTISTRKKCPACRFDKCLNKGMKLEAIREDRTRGGRSTYQCSYTLPNPLIMSDGTSANVLQANARMNGCVINSEASSDSNSIGGSSTSQRSNPIPQLLQEIMDVEHLWQYSEAELQRLNQPVITSGNSSTTTSASDRNTPSTSAGGISPTATTANITSNPLLASAGLSSNGENTNPDLIATLCNVADLRLLKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSLSSPGEIKISLGKTVTLTQAKTSGLQACIERMLNLTEHLRRLRVDRYEYVAMKVIVLLQSDTTELQEPVKVRENQEKALQALQAYTLSHYSDNRSKFGELLLRIPELQRTCQLVKEMLLIKSKDGEDFNLLMELLRGEH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01224670;
90% Identity
iTF_01224670;
80% Identity
iTF_01224670;