Basic Information

Insect: Poecilobothrus nobilitatus
Gene Symbol: lrrfip2_1
Assembly: GCA_947095535.1
Location: OX352772.1:46805676-46830408[+]

Transcription Factor Domain

TF Family: LRRFIP
Domain: LRRFIP domain
PFAM: PF09738
TF Group: Unclassified Structure
Description: LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 1 7e+04 -6.4 5.6 159 159 134 134 58 198 0.54

2 4 0.1 7.3e+03 -2.1 2.2 249 279 376 406 362 426 0.52

3 4 1.9e-110 1.4e-105 354.9 28.9 1 299 458 758 458 759 0.91

4 4 0.19 1.3e+04 -3.0 4.5 220 244 787 811 763 833 0.46

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	1	7e+04	-6.4	5.6	159	159	134	134	58	198	0.54
2	4	0.1	7.3e+03	-2.1	2.2	249	279	376	406	362	426	0.52
3	4	1.9e-110	1.4e-105	354.9	28.9	1	299	458	758	458	759	0.91
4	4	0.19	1.3e+04	-3.0	4.5	220	244	787	811	763	833	0.46

Sequence Information

Coding Sequence: ATGGAAGTATTAAATGAAAAAAATAATATAAAAAATGATATTATAACCAATAATAATAATAATAACAGTAACAATAATAATATACAAGTTGAATATACACCCGAAGATGGAACTGAATTTGATTTTAGTGATAGTGATTTAATTGAATCAGATGATAATGATGATGATGATAATATTGATAGTGATGACAGGAATCATAATACAAAACAAAAAAATGATAAAAGTAATTTAAATGAAAATTTAAATAAAACATTAAACAATTTAAATGATGACAATCAAATATTAAATGTTGAAAAATTTGCTGAAACATTTAATTCTACTTTAACATCAACAGCCGAAACAATAATACCAGAAAAACAAATAGAACAAGAATCATTCACTTTATCATCAACATCAACATCATCATCATCAAATATTGTAAGTGAATCAAATTTATCTGACAGCAATAATGAAAATTTAATTAATATGGAATCAATAATCAATTTAAATACAAACAATTCAAATAAATCAATTAACAATGAAAATATAAATAATAGTAATGAAAATAATAATAACAACAACAACAACAATCAAAATGAATTAATACAAAATGATTTAACAGTAAATAGTTCAGTTAATTTAAATAATAGTAATTGTCATAATCAAACAATAAACAATGATGACATTATGATTAGTAAACGTCCAAAAAATTTAAATTTAGAAAATTTAAATGAAATTGATAATAAATATTATAATGATAATGATCATGATAATTATGATGATGATGATAATAATATAAAAAATAATGATGATAATAACATAATAAATGATGCTGATCTTCTTGCTTCACCACCACCATATCTTATTAAAAAATCATCATCAAAAGATTTAATTGAACAACAAATAATGAATTCAAATAATAATCAATTTATTGATAATAATAATAAAATTCAATTATCTGAATCATCAACATCAATATCAATGATGGAACCATTTTGTCCAATATCAACAACACCAAAAAAATTTGTTGATTCAATTGATAGTGATGATGATGATCATGAAAATAATTTAGGATGTAAATTTTTTCCAAAAAATATGAATATGAGTTCAGGAAAATTAAGAACAGATTTAATAAAAGATGATAATAATAAAAATAAAGATAAAAATACAAATACAAATACAAATACAAATACAAATACAAATACAAATACAACTACAAATACAAACATAAATAGAAATACAAATATAAATAATGATAAAAATGATAATGGTGAAAATAATAATAATAATTATAATGAAGATGATGAAGTATTTTATAGTGGTGAAGATGATTATACTGATGATGATGAAGATAAAATTATTGTTGATTTCTTAGACAAGGCTAATCCATTTGCTGAAGCTAGACTGGCGGCACGACGTCAGGCTCGTGCTGAGGCACGAGAAATACGTATGCGTGAATTAGAAAGGCAACAAAAAGAAATGGATCAGAATGCTGATCGTGCATATGATATGCAAACATCATCTGGTATTGATCCATTAGCAAGATCTCGTTTAACAATTGTTGGTAATCATGTTGGTAGTACAATTGTTGGTAATAATACAACACATTTAAGAACACCTGGTAGCGGTGGTTCAATGTCATCTAGACGTAGTAGTGAAGATTCATTAGAAGAAGAGGGTAGAAGTATACGTGATATTAGACATGAATTAAAAGATCTTGAAGAACGTTTCCGTAAAGCAATGATAGCAAATGCCCAATTAGATAATGAAAGAACATCACATACGTATCAAATTGAATTATTAAAAGATCAATTAGAAGAAAAAGGTGAAAAATATGCACAGCTACAACGTGAATATAAAGAAAAATCACGTGAAACTAATGCACTTAAACGTAATGTTGATAAATTAGAAGAAGAATTACGATTAGTTAAAGGTCAATTAGATGAACGTGATAATTTAATTAGTGAACAAGGTTTAGTTATTGTATTGATTGAAAATGAAGATGGAACAGATGCTAAACGTGCTCTAGTCAGTGTTGAAAATGCACAACTTTTAGGTTCTGTACAAGGTTCTTTAGATGTTCGACTTAAAAAACTTACCGAAGAAAAACATCATTTACAAAAAGAAGTTCAAAAATTACAACAACAAGTCGATGAATTAAAATCACAAGGTAGAGGTAAAAGTTCTATGAATGGTCCATTAGGTATTGATGATGAATATGAAGCTCAAAGAGAAGCCAATAAATTAATATCTGAATATAAATATAAATTACAAAAAGCTGAACAAGAAATTGCTAGTCTACAAGCCAGTTTAGCTAGATCAGAAACACAAGTAATAAGATATAAAAGTACTGCTGAAGCAGCTGAAAAAGCTGAAGCTGAATTAAAAATTGAAAGAAGAAAATTACAAAGAGAGaatcgtgaagccatggaacgtttagaagaattagaaacatcaaataatcatctattgaaacgtttagataaactgaaaacagcaaaaagtacattattaaaagaactTTGA
Protein Sequence: MEVLNEKNNIKNDIITNNNNNNSNNNNIQVEYTPEDGTEFDFSDSDLIESDDNDDDDNIDSDDRNHNTKQKNDKSNLNENLNKTLNNLNDDNQILNVEKFAETFNSTLTSTAETIIPEKQIEQESFTLSSTSTSSSSNIVSESNLSDSNNENLINMESIINLNTNNSNKSINNENINNSNENNNNNNNNNQNELIQNDLTVNSSVNLNNSNCHNQTINNDDIMISKRPKNLNLENLNEIDNKYYNDNDHDNYDDDDNNIKNNDDNNIINDADLLASPPPYLIKKSSSKDLIEQQIMNSNNNQFIDNNNKIQLSESSTSISMMEPFCPISTTPKKFVDSIDSDDDDHENNLGCKFFPKNMNMSSGKLRTDLIKDDNNKNKDKNTNTNTNTNTNTNTNTTTNTNINRNTNINNDKNDNGENNNNNYNEDDEVFYSGEDDYTDDDEDKIIVDFLDKANPFAEARLAARRQARAEAREIRMRELERQQKEMDQNADRAYDMQTSSGIDPLARSRLTIVGNHVGSTIVGNNTTHLRTPGSGGSMSSRRSSEDSLEEEGRSIRDIRHELKDLEERFRKAMIANAQLDNERTSHTYQIELLKDQLEEKGEKYAQLQREYKEKSRETNALKRNVDKLEEELRLVKGQLDERDNLISEQGLVIVLIENEDGTDAKRALVSVENAQLLGSVQGSLDVRLKKLTEEKHHLQKEVQKLQQQVDELKSQGRGKSSMNGPLGIDDEYEAQREANKLISEYKYKLQKAEQEIASLQASLARSETQVIRYKSTAEAAEKAEAELKIERRKLQRENREAMERLEELETSNNHLLKRLDKLKTAKSTLLKEL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -