Pnob051746.1
Basic Information
- Insect
- Poecilobothrus nobilitatus
- Gene Symbol
- -
- Assembly
- GCA_947095535.1
- Location
- OX352773.1:218006945-218009684[-]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.4e-11 2.4e-07 32.8 0.1 1 87 12 100 12 154 0.85 2 2 5.4 5.4e+04 -4.1 0.0 117 143 357 383 349 389 0.72
Sequence Information
- Coding Sequence
- ATGAATTCAAATAACTTAAATAATGAACCATATTTAGAAATGACTGAACAACCGGGAGCTTCATATTATAGAAATGAATCCGAGATTGAAAAGGAAAAACATGGTTGTATACAAGGTGTTAGTAATGGTAAAACTTATCCAACTGTTAGAGTGGTTAATGGAAAAGGTAAAATGAAAATTGTTGTTGAACCAGTTAATGAAGACAATGGAGAACCACACTATTGTAGATTGGTTAGACAAGATAGAACATCGTTGTCTGAAAAGGTTATGGATAAATGTTCATTTCATCTTACAAAAAAAAATAATTATACAGAGAAATGTAAACTCGCTGTAATGATACCAGGAAAAGATTCTAAATTTTTAAGACCAAATACTGAAAAAAATTTAGGAAAAATTATTCTCAAATTTGAATTATTTGATGAAAATGAAAATAAATTAGATGAAATTAGAAGTGAAGCTTTCAGTAATAAAAGAAATAAATTGGAAATTAAAAAAATGAGTCAAATTGAAGGTAGTGTAGAAGGTGGTTCGAGTATTTGGATAGCTTGTTCACGTTTTCAATCAAAAAATAATAATATTGAAATAAGATTTTCAAAAGAAAATTGGGAAACCTATGTTAAAATTAATGAAGCTCCTAATCAAGATCTTTTAATTATTGATTCACCACCTTACATTGATCAAAATATTGTAGAACCGGTTATAGTAGATGTCCAATTAAAAAATCAAATTGATGGTGCAGTAAGTGAAAAATTTTCATTTACATATCAACCTAAACGTCAAGCAATTAAAAGATGTGCATCACCAATAGAAATGTATGATAAAGAAAATCATGCCAATGGTGTTATCGTTTCTGATAATATTCTTAGTGAATTTTTACAACTTAAACGTAAAAGAATAGATGATTGTAATATAATAGAAAAaaattcatacacaaattattcaacaccaatagaatataatgataatattgatagtaataataatgatagttatattaatgatagttataataatgatagttataataatgatagtaataatagttatagttataataatgatagtaataatagtaataataataatgtacaaaatgaattaccaGACAACATAAATGCCAGTGAAATAAATTCCGTAAATATTCCATTTGATGATTCATCCTTTGATGTTTTTTCTGATAACTCATCTCCTAATATTGATTCTGGGTATTCCGACAACTTATCTTTTAATATGGATTTTAGCCATTTATCAGTTGATGTTTCAAGCAATATTTCATCTCTTGGTATTCATTCTGGTGTGTCATCTAATGTTAATCAACCTCTTGAACAACATAATTTAAGTGATCTTAATGATGTTTTGGAAAAAAATCTACCAACATTAAATTGGATATCTGATAATAATTTTCCATGTGGTATAACAGAAGAATTTTTGTTATCTGAAAATTTTGTGGTGCCTGGCTTTCCATGTATTCAAACTGAGCCGACCGTAACAGTACCGTTTGACAATTATTTCAATAATATAATCTAA
- Protein Sequence
- MNSNNLNNEPYLEMTEQPGASYYRNESEIEKEKHGCIQGVSNGKTYPTVRVVNGKGKMKIVVEPVNEDNGEPHYCRLVRQDRTSLSEKVMDKCSFHLTKKNNYTEKCKLAVMIPGKDSKFLRPNTEKNLGKIILKFELFDENENKLDEIRSEAFSNKRNKLEIKKMSQIEGSVEGGSSIWIACSRFQSKNNNIEIRFSKENWETYVKINEAPNQDLLIIDSPPYIDQNIVEPVIVDVQLKNQIDGAVSEKFSFTYQPKRQAIKRCASPIEMYDKENHANGVIVSDNILSEFLQLKRKRIDDCNIIEKNSYTNYSTPIEYNDNIDSNNNDSYINDSYNNDSYNNDSNNSYSYNNDSNNSNNNNVQNELPDNINASEINSVNIPFDDSSFDVFSDNSSPNIDSGYSDNLSFNMDFSHLSVDVSSNISSLGIHSGVSSNVNQPLEQHNLSDLNDVLEKNLPTLNWISDNNFPCGITEEFLLSENFVVPGFPCIQTEPTVTVPFDNYFNNII
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -