Pnob064276.1
Basic Information
- Insect
- Poecilobothrus nobilitatus
- Gene Symbol
- -
- Assembly
- GCA_947095535.1
- Location
- OX352774.1:163086855-163087511[-]
Transcription Factor Domain
- TF Family
- TSC22
- Domain
- TSC22 domain
- PFAM
- PF01166
- TF Group
- Basic Domians group
- Description
- These proteins are highly similar in a region of about 50 residues that include a conserved leucine-zipper domain most probably involved in homo- or hetero-dimerisation. Drosophila protein bunched [1] (gene bun) (also known as shortsighted), a probable transcription factor required for peripheral nervous system morphogenesis, eye development and oogenesis.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.59 8.3e+03 -1.1 1.2 21 52 56 86 52 91 0.66 2 2 4.7e-09 6.6e-05 24.9 4.9 12 51 96 135 93 143 0.89
Sequence Information
- Coding Sequence
- ATGCAGTGCAATGGCGAATGTATTAAATGGTTCCATAAACATTGTTCTGGTATATCGGATGAAGAATTCAAGGAATACCTAGAGGATGATACAAAACTATGGATCTGCCCAAATTGTACCACCCGAAAAAAGAGACATTCAACAATCAACAGCACTACCATAAATAATTCAATAAGGAACTTATTGATCACAAATAATAAAAATAATGATGGTAACGAAGCAATAATGGAAAAATTAAATGAAATATTATGGCAAATAAATTCACAAGAAAACCAATTAACTGATGTAAGAAGTGAAGTTAAGGAATTAAGAGATAAAATTAACTTCTTATTAGATGAAAATATAGCCTTGAAAAATGAGAATGAATACCTAAAAGAAAGAATCGATTACAACCAAATTGAACTCGAAAAATTGAAACAAGAAAAAAACAAAAATATGCTGGAACTGTCAGGAATTGATGAAATTCCACATAAATCGGCAGAGGATATTGCTAAAGCAGTTTTTACTAAATTGGGGATTAACGTGAAACATGATGATATAAAATGCTCATATAGGCAAAAAAAGGGCTCAAAAAATTCTGGCGAACCTTCGAAAATAGTAATCCAAGTAAATGTAAATCTGAAAAATTATATCATGAAAAAAAAAGCGTCCAATTAA
- Protein Sequence
- MQCNGECIKWFHKHCSGISDEEFKEYLEDDTKLWICPNCTTRKKRHSTINSTTINNSIRNLLITNNKNNDGNEAIMEKLNEILWQINSQENQLTDVRSEVKELRDKINFLLDENIALKNENEYLKERIDYNQIELEKLKQEKNKNMLELSGIDEIPHKSAEDIAKAVFTKLGINVKHDDIKCSYRQKKGSKNSGEPSKIVIQVNVNLKNYIMKKKASN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -