Pnob013979.1
Basic Information
- Insect
- Poecilobothrus nobilitatus
- Gene Symbol
- -
- Assembly
- GCA_947095535.1
- Location
- OX352772.1:147423544-147430254[-]
Transcription Factor Domain
- TF Family
- TSC22
- Domain
- TSC22 domain
- PFAM
- PF01166
- TF Group
- Basic Domians group
- Description
- These proteins are highly similar in a region of about 50 residues that include a conserved leucine-zipper domain most probably involved in homo- or hetero-dimerisation. Drosophila protein bunched [1] (gene bun) (also known as shortsighted), a probable transcription factor required for peripheral nervous system morphogenesis, eye development and oogenesis.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.00098 14 7.9 0.4 21 43 76 98 73 105 0.89 2 3 2e-08 0.00028 22.9 2.5 21 54 276 309 271 312 0.92 3 3 1 1.4e+04 -1.8 0.0 23 52 452 481 450 485 0.83
Sequence Information
- Coding Sequence
- ATGTGTCCAAAATGCTCTCCCAGTAACAACGAGTCCTTTGTAATTGTGGGAGGTTCCGAGGTAGAAAATGAAGCGCGCCATAGAATTTTAACAAATATCGATTCAGTTAATGTGTTGTCTATTTTCGATTTTAAAAATACTAATTGGGATACAACATTAGCTGCATTCCTTAAAAAACCAGCAAATGCAATAATAGATATCAGAAAATCCCAACAAATCTATTCCGATCAACTGTTCGATTTAACACAACAAAATAAAGAAATTCAAAGAGAAAATGAAAACGTAAAAAAACAATTGGGACATAAAGAAAACATGCCAGAATATCATTGTACTAAATTTAAAGGTTCTACTTTTGTTGGTATTGGAGATATGCTCTTTTGCTCTTGTGTCCGGAAGTTTCCAAAAGCCATGGTTCAAATTTTTTCAAATATCAGTTTCAAATTTTACAGAAAAGGAATTATAACAGAACACACTTGTACTAAAAATAAAGGTTCTATCTTTGTTAGTTGTGGAGATACACTCGTTTGCTCTGGGGCTCGTGTAGGGTATAATAATGTTATTGTAGCTGGCCTACCAAATAGTTTAAACAATCCAATAGAAACAATTTTAAAAATTGGAGGGAAAATTGGATCTAATGTGGCTATTGAAGATATTTCTGATATTAAACTCCTATGGAATAAAAATACAACCAACGAAAATAACAATACGGGATTTAACAAAGAAATAGATTCAGGTAAAATTGATAAGTCAACAGATACTTCTAATTCATTTTTAGGTACATGTAACAAATCCAGAGATACTTTCGATTTAGATCTTAAAAGTCAAAAGGAAATTAAAGAATTAAAAAGGAAAGTTTTTAAATTGCAACAGGAGAACAACATTATCAAAACTCTTTTCAGTGAAAATCAAATAAGGAAAATTCAAAACTGTAGATTAAGAGTAAAATGGAAAATTGATAATATTTCGGAAGCAATATCAATTTATGCAAGTGGTCCAGCGGTGAAATATGCAACACAATTGTTTTCTCATACAAATTCTTGTGCTTTAGAAAGGGAAAATACAAATTCTTTGGGAATCTTGGAAATAGGTAAGTCTAATAATTGGAAAGAATTGTCTGTTTTTACTTCACAAATAAACGACTGGTTCGAAAGTTCGATGTCTCTAAATCCAGAATTAAATCAAGATCCATTAAAAATGTTTTATGGAATAATTAGAGCGAAAGAAGGATTTTACGATCATCCGAATGCTTGTGAATTCAAATATAAATTACGCAGCTATTTACTACGAAAACATCAAGGAATAATATCAGGGTCAGCTAACGTCCAAGCAGGAACGAAAGGTAGTGTTCAAATGATTATATATTTGAATACAGATATCAATGCTACAGAGATTGAATCAGACTTTTATGGATCTGTCATTACATCTAAATTAATTGAAGCTCTGACGGGATTACAGAAAATGTCTGATCTTTAA
- Protein Sequence
- MCPKCSPSNNESFVIVGGSEVENEARHRILTNIDSVNVLSIFDFKNTNWDTTLAAFLKKPANAIIDIRKSQQIYSDQLFDLTQQNKEIQRENENVKKQLGHKENMPEYHCTKFKGSTFVGIGDMLFCSCVRKFPKAMVQIFSNISFKFYRKGIITEHTCTKNKGSIFVSCGDTLVCSGARVGYNNVIVAGLPNSLNNPIETILKIGGKIGSNVAIEDISDIKLLWNKNTTNENNNTGFNKEIDSGKIDKSTDTSNSFLGTCNKSRDTFDLDLKSQKEIKELKRKVFKLQQENNIIKTLFSENQIRKIQNCRLRVKWKIDNISEAISIYASGPAVKYATQLFSHTNSCALERENTNSLGILEIGKSNNWKELSVFTSQINDWFESSMSLNPELNQDPLKMFYGIIRAKEGFYDHPNACEFKYKLRSYLLRKHQGIISGSANVQAGTKGSVQMIIYLNTDINATEIESDFYGSVITSKLIEALTGLQKMSDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -