Pper002394.1
Basic Information
- Insect
- Pocota personata
- Gene Symbol
- -
- Assembly
- GCA_963082735.1
- Location
- OY720429.1:33592861-33594977[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 9 0.0091 29 6.5 2.6 15 40 114 136 109 139 0.89 2 9 0.02 63 5.4 0.8 10 29 213 230 210 239 0.85 3 9 0.0013 4.2 9.2 2.1 11 43 239 271 230 272 0.82 4 9 0.005 16 7.3 1.0 15 29 316 330 309 338 0.78 5 9 0.005 16 7.3 0.5 13 41 343 368 332 370 0.88 6 9 0.0016 5.1 8.9 1.4 14 38 379 404 374 408 0.78 7 9 1.7 5.5e+03 -0.8 1.1 13 28 406 421 399 432 0.71 8 9 0.00077 2.4 9.9 0.8 13 36 434 458 428 461 0.74 9 9 0.13 4.1e+02 2.8 0.0 19 41 466 485 462 486 0.81
Sequence Information
- Coding Sequence
- ATGGATAGGTCTGAAGGCGAGAGTTCGGAGGATAATGAGATGAAAACGCAGAAGTCTGAGGACAGAGACGAGTCGTCGCAGAGCTGTGACAACGATGAGGAGAAACACACGACGAGAACGCGAAGTGGAACTTATCGCAAAAATCTGCGTCTAgtgaggaagaaaagaaaacctCGAACCAAGGTCAAACCCCAAATAAAAGCCAAGAAGTCTGCGAAAGTCGTGAAGGAGCTCTCAGAAGAGACAGACAAGGAGGACAATGGTGATTTGGAGGAGATTTTAGTAGAACCTGACATAAAATCAGACATCGAAGAGGACGAATGCATACCAAATGGTTGCAAATCAATTGAATGCTTTATATGCGGCTGTAGATTAAGTAGAATCTACAATTTGCGTCTTCACATGGACACACACACGGAAGAGGAATCGTTTAACAtggaaacttttgaaaattcagAGATATTCAATGTCTTGAATCCGCACAAGAGGAACATCGATTCGAATATCATTAAGAATTTCGTGATTCAAGAAATCAAAGCGAAGCGATACTCCCAGTTCTATTGCATCCTCAACGAGGCGGCGGTGGAATTGCACATCAGTGATTCCGAAACTGACTCTGATGGTGCCGACGATCTTATACCCCACAACAACTACCGATGTGAGCTGTGCAAAAAGAATTTCGATCGCCGCTACAAGGCACTCTTCCATCAGAAGACCGCTCACGTGAAGACAGACTTTGCGGTTGAATGCgactactgcctgaagaagttCGTTTGCATGAATCTGCTGATCTACCATTTGAAAACCCAGTGCGAGAGCGATGAAAAGCCAGTGCCTTGTACCGAGCGCTTCATGAAGTTCCTTTTGAAGGCCAACCTGGACCACTATGCGAGTCTAGCTCAGGCAAGAGAGCAAAGAAAACTGCGCAAACTGACCGAAGCACCAAAATCGTACACCTGCAATACATGTAACAAAACGTTCACCCGCCAGGAGCATCTCAATCGCCATAGTGCCGTTCATCTACCCGACGAGATGAAGTTCGAGTGTCCAGTCTGCGATAGACGGTTCAATCGAAAGGACAACATGCGTTCGCATATGAAGACCCACACCGAGGAGGGAGCACGTAACGCAGAATCACGGAAAATCCTCTGCTCTTATTGCGGACGAAGTTTTAGTAGCAAATCCAACTACGTAGTGCACATGCGGCGGCATACTGGTGAGAAGCCATACAAATGTGATGTCTGCGGGAAGGGATTCCCCAAGTCGACAGATCTGAATTCCCACAAGATCACCCACACGGGGGAGAAAAACTTTGTGTGTACGATCTGTAATAAGGCGTTTGCCAGATCAGCTGTACTTTCGAAACACATGCGAGTGCATAGCGGCCCATATCCGTGTACATTTTGTcagaaaattttcacaaaaccaagtgCCTTGACTGTTCACTTGCGGACACACACCGGAGGTCGACTGTGCATGTGTGTTGTGTGCAATAGATCTTTTGACACGAAGAATGAATTGGACGGGCATTTTGCGACAACGGGGCATAATAATGAGCCCAAGCGGGTAATAGTGATAAAAGAACTTGCGATTTCAGTCAATACTTCCAAGAGTAGTGAGGAAGATCGTGCAGCATCACTTCAACCACCACTACCAACATCAACGCAGTCGCCTACaatggaaattaaaacaaatgacgATCCCTTGGAGATTAAAGAGGAAGAATGGCGAACGACAAAAGTTAAAGTGCCTGTAAATGAAGCAATTCAAAGTGTCCTGCAGAGGTCAACCAACACAGCCACCGCGGAGGCTGTTGTGAACTCCAACAGCGGTGCACAAGAGGTGTCTGCACAGGAGAATGATAGTGTAATGTCTGCGTATTCTCCACTGGATGCTGGGTATGGAGATGATATGCAGTACAGTGATTGGTAA
- Protein Sequence
- MDRSEGESSEDNEMKTQKSEDRDESSQSCDNDEEKHTTRTRSGTYRKNLRLVRKKRKPRTKVKPQIKAKKSAKVVKELSEETDKEDNGDLEEILVEPDIKSDIEEDECIPNGCKSIECFICGCRLSRIYNLRLHMDTHTEEESFNMETFENSEIFNVLNPHKRNIDSNIIKNFVIQEIKAKRYSQFYCILNEAAVELHISDSETDSDGADDLIPHNNYRCELCKKNFDRRYKALFHQKTAHVKTDFAVECDYCLKKFVCMNLLIYHLKTQCESDEKPVPCTERFMKFLLKANLDHYASLAQAREQRKLRKLTEAPKSYTCNTCNKTFTRQEHLNRHSAVHLPDEMKFECPVCDRRFNRKDNMRSHMKTHTEEGARNAESRKILCSYCGRSFSSKSNYVVHMRRHTGEKPYKCDVCGKGFPKSTDLNSHKITHTGEKNFVCTICNKAFARSAVLSKHMRVHSGPYPCTFCQKIFTKPSALTVHLRTHTGGRLCMCVVCNRSFDTKNELDGHFATTGHNNEPKRVIVIKELAISVNTSKSSEEDRAASLQPPLPTSTQSPTMEIKTNDDPLEIKEEEWRTTKVKVPVNEAIQSVLQRSTNTATAEAVVNSNSGAQEVSAQENDSVMSAYSPLDAGYGDDMQYSDW
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01542385;
- 90% Identity
- iTF_01223655;
- 80% Identity
- iTF_01223655;