Basic Information

Gene Symbol
ct
Assembly
GCA_963082735.1
Location
OY720430.1:131130713-131174551[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 1.3e-26 3.9e-22 79.7 0.0 3 71 794 863 792 869 0.94
2 3 5.3e-32 1.6e-27 97.0 0.0 3 77 1225 1300 1223 1302 0.96
3 3 7e-31 2.1e-26 93.4 0.0 3 77 1442 1517 1440 1519 0.96

Sequence Information

Coding Sequence
ATGGAAGAGGAATTTCCTAAGGAGCAACAGGACTCGTCGAAACAAATCAGGCAGATACAAATGGGTTGGTGTGGTTCCAGTTTGAGTGATGGGTTAGCGGAGAGAGAAAGTTCACCTTTGAGAGGAGGAAAATCACTGCGCAGGGCTACTTTGGCTGAAAAGGAAGTTAACACTTTGAAGGAGCAATTGTCAACCGTTTCTactgcagcaacaacaacatcaacgtCTTCTACAACAACCACAACTGCATCTTCGATACATTCGTCGCCACCATCTCCGTCATCGGGGGGCACAACGCCGACATCAACACCCATACCAAATATCAAGTTGTCACCAACGATAAACAACAACAGTAGtttcaataacaacaataataataaattaaatagtgTTGCCATATCACAGCATTTGCACCAGAACGGAAATCTGCTGGCGGCAACACCGTCACCGTCTCCACCATTATCCGAAAACGGTAGCACACTCAACGGTTGCCTAAATTCGGCGGCAAAGTTGCTCTTCAATCATAATCAAATAATGGACACAAATGCATCGAGCACTGCGACCGATGTATCTACTGTAGTGACGACGACAACCACTACGCACGGTTCAACGGATGCCAGTAAGCTCATTACGGCAATGACCGCCGAAATGAATCTCCACCAAGACTCCAGCGAATCGGCAACGCTGGCGAGTAATCAAATGTTAAATCAGTCGCATAGCCCCCACCTCTCGGTGGAGGGCAGTGGGAATGAGGCAACAcgaaacaataataacaataatagtacTAGTAACAATAATAAGAATACAAATAGTAATAGCAGTAGTAGTTGTAATAATAATTTAGCTGATGAATTGGCTGCCAAAGAGAAAGAGATTAAAGCACTTATCGACGAGGTAAACCGACTGCAAGCCCTCCAAGAAACCCACATTGTACAAATACAAAGACTTGAAGATAATCTAGAAGCGAAAAGTCAACACATTTCAAGACTAGAGGCTCGCCTGGACAAACAACAATTTAAAAGCGATGCCTCTGTGGCGCCCAAACCAAGTCCGGATCTGTACCACGAGGATGACGAGGATACAGCGGTCTCTGCGAACGTTCCTGAGCCGCCCGCGGTCCCCGAAGAGATTcacataaaaaaggaaaatcaaacaccaacaacaccaacaccGCTTGGACTCGACATCAGAAGTCAGCAGTCGGTGGCAGCAGCCGCTGCCGCTGCGGCTGCGGCCAACGATCCCAAGCAGTTCCAGGAACTTTTACTCGAAAGAACCAAAGCACTGGCGGCCGCCGCTCATGCCTCGAGTGAGGCACTGAAATCTGAAGGAATTTCCAGTGACACGGCCTCAGCAGACACCTCCAAGACTTCGGACATAGAGTCTGCAGCATGTGTGGTCCTTAACAGTGACCCAAACGATTCTCAGCAGCAGGAACTGCGACCTCCATCAGAGTCGGCTGCGTCTTCTACGTCCGTAGAACAGATTCCGTCGTCGAATTTCCAAAGTGTCGATCAGTTTGGTTCGCTGCTTGGCGGTGAGTTGGTAAATTCGTATTGGCGTCGTGGCTTTGATTTGTCTGCGGAGCTCAAGTTGCCGCCGCCACATCACCTGCCATTAGCCCCACCACCCCCGTTACCCACGCAACAGCCGTCACCAGCAACAGCTGCCGTTTCGATAGCACAcccaccaccaccgccaccatcaatagcagcaacaacaaatccAACCTCTAAAACGACAAcatcgatttttcaaaatttcccatCAATTCTTTCGTGCCGATCGCCTCCACCACTCTCAATGTCGGCCACGGGACCATCAACCACCACTCTCTTGAGTCAGCTAGTCAATTCAACCTTCTCATCCAATTCAACTCCTTCTCTTCGCACAGATACCCattcgtcgttgtcgtcgtcgtcgaccACAGCCACGGCCACCCACCTGCAACAGTCttcgcatcatcatcatcaccaccatcatcatcatcagcagcatCCTGCCCTacagcaacatcatcaacagCAGCAGGACTACGAGAAGGCCAACAGTCATCATGATTCCTCGTCAACGGCGAGTACGCCTAATCTCCAGGACCAGCGTTCCAATGACGAGCACCTGAACGGGGCAAAGTCCGTCAAAGCCCAAGAGGACAACAACAATTCGTTGGGATCGTTGGCACATCTACCACCAGCATTCCTGCCAGGCTTGCCATTCCAATTTCAAGATCGTGGTCACTTTCGTTTCGCCGAAGATATCCAACTACCGCCTGGCGCCTCTATGGCCGGCCGCCTCGGAGAGTCTCTCATACCCAAAGGCGATCCCATGGAGGCCAAGCTCCAGGAAATGCTACGCTACAACATGGACAAGTATGCCAATCAAAGTCTGGACACGCTTCACATATCACGCCGCGTACGCGAACTTCTCTCCGTGCACAACATCGGACAGAGGCTCTTCGCCAAGTATATCCTCGGATTGTCGCAAGGCACCGTCTCCGAACTGCTGTCCAAGCCAAAGCCGTGGGATAAATTGACTGAAAAGGGCCGTGACAGCTACCGCAAAATGCACGCCTGGGGATGTGATGATAACGCTGTGATGCTACTAAAGTCTCTAATACCCAAAAAAGATTCGGGCATGCCGCAATATGGTCGCAATGAGGACTCCATGTCAGACGATCGTATTGCACACATCTTGAATGAAGCTTCCAGCCTTATGAAGACCCCACAGGGACCAGGTTCACAGTTACAGCAACAAATGCAGCATGAAGCTCAACGTCAGCATCAGCAGCAGTCCTCTTCACTTGAGGATTCGCACAGCAACGACGATTCCAAGTCACCCCACGCTTCATGTACTTCACCATTCTACAAGGAGTCACCAGcccagcagcaacagcaacaacaacagcaacaacaacaacaacaacaacaacagcaacggCATGAGGCACAACGGCGAAGCGTAAAGCCCGAAGAGATGTCTCAGGATAAGATGGCACGAATATACCAAGAGGAGCTGGCAAAACTTATGACCCGCACACCGCGCGACACTTTTCCAAGTTTTCTGTTTCCACACTTTTTCAGTGCGGCTGGTGGCCTTCCGCCCGCCAACAGCGCAATGCCGCCAGACGACAACATTCGCATGACTTTCGAGGCATATCATCGGGAGATGGCCAAGTTGCAGCAAAACAGCAGTGGCAATATACCCAACTTCCCAAATTTTTCCAGCTTGATGGCCTTGCAGCAGCAAGTGCTGAACGGTGCGCAGGATCTATCCGTCCCGAAGGAAAACGAAATGAAGGTGAACGGCCAGCGCAATTCCATGGAAAGCTGCGATTCAAATCAAACCAAAGAAACCAACGACGAGGGGGCGGGGTTGCGTCACTCAAGTGCATTTAGCTTAGTTCGTAATAAACAAGAATCCACGCCTATACAGTGTTCCAACTCCAATACAAATACAAACTCAGCTGCTCCCAGTCCTCTCAGCAATTCCATTCTACCACCGGCTATGACGCCCACTGAAGACTTTTCAACAGCTGCCAGCCCTCTGCAACGGATGGCATCGATCACAAACTCACTCATTACGCAGCCGCCAGTAACACCACACCACACGCAGCCGCAGAGACCCACAAAGGCCGTGCTGCCGCCCATCACTCAGCAGCAGTTCGACATGTTTAACAATCTAAACACCGAAGATATTGTCCGCCGAGTAAAAGAAGCCCTTTCGCAGTACTCAATCAGCCAGAGGTTGTTTGGAGAGTCAGTTCTGGGCTTGTCGCAGGGATCTGTGTCAGATCTTCTCGCCAGACCCAAGCCCTGGCATATGTTGACGCAAAAGGGTCGCGAACCCTTCATTCGCATGAAGATGTTCCTGGAGGATGATAATGCAGTGCACAAGCTGGTGGCCAGCCAGTATAAGATTGCTCCGGAAAAGCTTATGCGTACTGGCAGTTACAGTGGCAGTCCGCAAATACCACAGGGCCTGGCAAATAAAATGAACAGCATTCCAATGCAAAAGATGATGAATGAGTTGAAGATGCAAGAACCGCAGGCGCAGCATATAATGCAGCAAATGCAGGCTGCCTCCGCAATGGCAGCCGCCGCCGCTGCTGGTCACATGCAAAACGCCCAGCACCAGGGGATGTTGCTGACCACCCCAGGACTTCCACCACAGCATGCAATAAGCCTACAACAAGCTGCCGCTGCCGCGGCCAATGAAAAAAAACCAATGATGATGCCAATTCACTCACCACATCAAGCCAATGCTATGCGAAGCAGCATGCACCAGCACATGTCTCCGACGGTGTACGAAATGGCTGCGCTCACTCAAGACTTAGACACGCAAGTAATCACCACCAAGATAAAGGAAGCTCTGCTGGCAAACAACATCGGCCAAAAGATCTTCGGCGAGGCGGTACTGGGCTTGTCACAAGGCTCCGTTTCGGAGTTACTTTCGAAACCGAAACCGTGGCATATGCTCAGTATAAAGGGGCGAGAACCCTTCATTCGTATGCAGTTGTGGCTTTCCGATGCAAACAATGTCGAACGCTTACAGGTACTTAAGAACGAACGTCGTGAGGCTAGCAAACGCCGTCGCTCAACTGGCCCCAATCAACAGGATAACAGCTCTGACACCAGCAGCAACGACACAGCTGATTTCTACACTAGCAGTCCCGGACCGGGATCCGTGGGTTCTGTAGGTGCTCCTCCAAATAAGAAGCAGCGTGTACTCTTCTCAGAGGAACAAAAGGAAGCGCTCCGTCTGGCCTTCGCCCTAGACCCATATCCCAATGTGGGAACCATCGAATTTCTTGCCAACGAATTGGGCCTGGCAACGCGCACCATCACCAACTGGTTCCACAATCACCGTATGCGCCTCAAGCAACAGGTGCCGCATGGTCAGCCGACGGAACCGGTTCCCAGTCGAGAAAACACCAACGCAACACCCTTCGATCCCGTCCAATTCCGTATACTCCTCAATCAAAGACTGATGGAATTGCAGAAGGAGCGCATGGGTCTCAGTGGCGCACCAATTCCCTACCCACCGTACTTTGCCGCCAATCCCAATCTGGCGGCGCTCATTGGCCGTGGTCTCCTTCCCGGTGGAGGGGAACCCGATCTACAAGCCCTCAACAACGCCTTCAAGGAACAAATGAGTGGCCTGGATCTTTCCCTAAAACGAGAACGTGACGACGATTTCGAAGACGACGGCGAGGGTGACAGTCACTTGTCCGATAATGAATCCATCAATGGAAGCGATGAAAAGTCCGAATTGAGTGAAACACCTCGGTCTTCCTTATCCGGAGCCGGAATGCAATCGAGGACATCTCGCCGCAAACCTGCAGCTCCGCAATGGGTAAACCCTGACTGGCAAGGAGACGGCAAATCAGGACTAATGCCGCCAATGCCCAGCGTTGCCACCGACAAGGAAGTCATCATCAACGGCGTATGTGTGATGCAGCAACAAGCGGCCGACTACAGTCGAAAGTCAACGGCGgcggacgacgacgacgacggtgCATCCGATGCCAATGACGAGGAATCATTAGCCCATCATCGTGCGCAATCCTCCGACTGCGAAGATACCCCCGCTGACATCGATCAAAGATTCATGGAACCCGAGGTTCGGATCAAACAAGAAGAAGACTGTGACAGCAACGATAGCCATCAAGACGATCACGATTCTGATCTAAGAAAGCCTACACACCACCGGGATGACGAGGACGACACTCCTGGAGCATGGAATTACTAA
Protein Sequence
MEEEFPKEQQDSSKQIRQIQMGWCGSSLSDGLAERESSPLRGGKSLRRATLAEKEVNTLKEQLSTVSTAATTTSTSSTTTTTASSIHSSPPSPSSGGTTPTSTPIPNIKLSPTINNNSSFNNNNNNKLNSVAISQHLHQNGNLLAATPSPSPPLSENGSTLNGCLNSAAKLLFNHNQIMDTNASSTATDVSTVVTTTTTTHGSTDASKLITAMTAEMNLHQDSSESATLASNQMLNQSHSPHLSVEGSGNEATRNNNNNNSTSNNNKNTNSNSSSSCNNNLADELAAKEKEIKALIDEVNRLQALQETHIVQIQRLEDNLEAKSQHISRLEARLDKQQFKSDASVAPKPSPDLYHEDDEDTAVSANVPEPPAVPEEIHIKKENQTPTTPTPLGLDIRSQQSVAAAAAAAAAANDPKQFQELLLERTKALAAAAHASSEALKSEGISSDTASADTSKTSDIESAACVVLNSDPNDSQQQELRPPSESAASSTSVEQIPSSNFQSVDQFGSLLGGELVNSYWRRGFDLSAELKLPPPHHLPLAPPPPLPTQQPSPATAAVSIAHPPPPPPSIAATTNPTSKTTTSIFQNFPSILSCRSPPPLSMSATGPSTTTLLSQLVNSTFSSNSTPSLRTDTHSSLSSSSTTATATHLQQSSHHHHHHHHHHQQHPALQQHHQQQQDYEKANSHHDSSSTASTPNLQDQRSNDEHLNGAKSVKAQEDNNNSLGSLAHLPPAFLPGLPFQFQDRGHFRFAEDIQLPPGASMAGRLGESLIPKGDPMEAKLQEMLRYNMDKYANQSLDTLHISRRVRELLSVHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWGCDDNAVMLLKSLIPKKDSGMPQYGRNEDSMSDDRIAHILNEASSLMKTPQGPGSQLQQQMQHEAQRQHQQQSSSLEDSHSNDDSKSPHASCTSPFYKESPAQQQQQQQQQQQQQQQQQQRHEAQRRSVKPEEMSQDKMARIYQEELAKLMTRTPRDTFPSFLFPHFFSAAGGLPPANSAMPPDDNIRMTFEAYHREMAKLQQNSSGNIPNFPNFSSLMALQQQVLNGAQDLSVPKENEMKVNGQRNSMESCDSNQTKETNDEGAGLRHSSAFSLVRNKQESTPIQCSNSNTNTNSAAPSPLSNSILPPAMTPTEDFSTAASPLQRMASITNSLITQPPVTPHHTQPQRPTKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGSYSGSPQIPQGLANKMNSIPMQKMMNELKMQEPQAQHIMQQMQAASAMAAAAAAGHMQNAQHQGMLLTTPGLPPQHAISLQQAAAAAANEKKPMMMPIHSPHQANAMRSSMHQHMSPTVYEMAALTQDLDTQVITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQVLKNERREASKRRRSTGPNQQDNSSDTSSNDTADFYTSSPGPGSVGSVGAPPNKKQRVLFSEEQKEALRLAFALDPYPNVGTIEFLANELGLATRTITNWFHNHRMRLKQQVPHGQPTEPVPSRENTNATPFDPVQFRILLNQRLMELQKERMGLSGAPIPYPPYFAANPNLAALIGRGLLPGGGEPDLQALNNAFKEQMSGLDLSLKRERDDDFEDDGEGDSHLSDNESINGSDEKSELSETPRSSLSGAGMQSRTSRRKPAAPQWVNPDWQGDGKSGLMPPMPSVATDKEVIINGVCVMQQQAADYSRKSTAADDDDDGASDANDEESLAHHRAQSSDCEDTPADIDQRFMEPEVRIKQEEDCDSNDSHQDDHDSDLRKPTHHRDDEDDTPGAWNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00976241;
90% Identity
iTF_01541948;
80% Identity
iTF_01223275;