Pper000823.1
Basic Information
- Insect
- Pocota personata
- Gene Symbol
- Rel
- Assembly
- GCA_963082735.1
- Location
- OY720429.1:2944601-2951489[-]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1e-47 6.6e-44 151.5 1.3 1 168 81 265 81 266 0.92 2 3 5.4 3.6e+04 -3.8 0.1 116 151 424 458 414 468 0.66 3 3 3.2 2.1e+04 -3.0 0.0 136 157 541 561 534 568 0.71
Sequence Information
- Coding Sequence
- ATGAATAGGAATCAAATATACGATTTGGATAAGAAAGTGTATTTTAGTGATTGCTCCACAAAGTCAGCACCGTCAACAATGTCAGCGACTAACAACCGGGCTAACATATTACCGATACTTAATTTCCCCAAATACGAGACAAGTTCAGATGACATCACGATGTCATATTCTAATTTACCGCCGCAAAGAGCCAGCGTGTCTAGTGGCAGCAGCGCAATGGAAATTGGTCACAGCAGTCAGCTGGTGATTCTCGAGCAACCTACTGAAAAGTTCCGCTTTCGTTATAAGTCGGAGATGCACGGCACACATGGTTCACTGAATGGTGATCGATCGGAAAGGAACAAGAAAACGTTCCCAGAGGTGGAATTGAAGAATTTCAACAGTGCGGGAGTCATACGTTGCAGTTTATATCAAACGAATATTGATAAGCCATCGCTACACTCACATCAACTAGTGGTACACAGGGATGACACAGACGTGTGTGATCCACATGATGTTAATGTTTCTCCAGAAAAGGGTTACATAGCCCGATTCGAAAATATGGGCATAATACATACTGCCAAAAAGGATATTTACAAGGAAttacttaagaaaaaaataaaaaaattaaaatttgaactaCAGTGCGAACAACTACCACAAAAGCAAGAGAAAGCCTTGCGAGATGAAGCAGAAAGGGAGGCTAAATCGATGAACTTGAATCAGGTacgactttgttttgaagcatttaaaatcgtcgatggaAATCGTTTGGTAAAAATCTGTGAGCCTGTATTCTCACGACCTATCAACAACCGCAAAAGTGCGTTGACAGGCGAATTGAAGATTTGTCGTTTAAGTATCATTGCCGGCACTGCTGCTGGTGGGGATGATTTGATTCTGTTGGTtgaaaaagtcaacaaaaacaacataaaAGTTCGTTTCTATGAAATAGTCAACGACGAAGAAGTCTGGGAAGCATTTGGTTATTTTACTGAAGCGGATGTTCACCACCAGTATGCTATTGTTGTGCGTACACCAGCATATAAAGACAAAGACATCGACTCTCATGTAAATGTCTTCATTGAACTAGTGCGAGAGAGCGACAACGAACGCAGTTCTGCAGTAACATTTCGGTACAAACCACGAGACATTGTTTTGTCACGCAAACGAAGGCGAACCTCGAATACATCGTCGTCTACAATAAGTCCACTAAATTCGTACGAGCTACCAGAATCTATTGCCAACGGTATACCACAGCAAGTACAGTTATTGAAACAAGAGCCACAAACCATTAGCCAAGAATTTAACAAAGAAGGCGAGTTGAAAGCACTTTATGGCACCGACTCGAATGAATACCAATGTCAGTTTAACAGTTTCATGCAGCAAGTAGACAATGACTCCGATGAATTGGTGAACATAATTGGTGGCCCGCCTTTACTTGATCCCGATTTTGGATTCTTGGATTTCACACTTGAGATCGACGGTGAGGCATCTCCAAATATGAGGCAAAAACGAAGTCGACCAAAGAAGCATGGTTCAAATACAGGACAACATATTAAGATTCAAACATATCATCCAACAATGAAGCTGTTAATATCTGCGTTCAATGATTACTCGAAATTAGGCCTAGAGAAGGTCATAAACAAAGTTCgaacaattttcgaagaatatgTTGCTGACAGTGATAACGAAGACACCATTTTGCATGATATCGTTAAACAAGGCAGTCAGTCGGATGCAATAatcgttttaaaaatattatcaaaactcAACTTAACGAATTTATTGTCTCAAACAAACAATCTCCGCCAGACACCGCTGCACGTGGCTTGTATATTTGATCAGCCTGTGTTCATACGACCCTTGTTGGGCCTGAAATGCGATCCCAACGTACAGGATAGTAAGGGCAATACAGCATTGCATATTGCTATTGCTGAAAATTTAAAGCAATGTACCGAGGGTTTTGTCTCACACATTTCCTCCAGCAAATTGAATGTGAATCTGACCAATGATATCGGATTAACTCCACTTCACTTGGCCATTCGTAAGAATAACATTGATTTTGTGAAGATTCTTTTGGTGAAATGTAATGCTTCAGCCAAAATTGCAAATTCAAGTGATGGAAACAATGCTTTGCATTTAGCTGTACAGCAACATAACAAGGAAATCGTTAAGCTTGTTTTAGAGAACAGTAATGTGAAATTGAATACGACAAATCGTGCTGGGCACACTGCTTTAGATCTGGCCAAGACGCTGGGAGGAGAAGAGAGAACAGAAATTCTTCAAATATTACATGCTTATATGCCATCATCAACTGATATGTCATCACCAACAATTGATTTCATTAAAGAAGAACCAGAGGATAGTAGCAGTTCAACTGGAGACGATGATGACAAATCATCGCAGCTGAGTATAGAAATTAAAGAGGAGAATGAAgagatttatttaaaacaaatgctgaaagATGAAAAGATCTGTAACCAACTTGCACAACTCCTCAATGTagataataaatggaaaaagcTTGGCAGTCAATTAAAATTGGATCATTTGATGTTTATGTTTGTGAATGCTGAGGCTATGCTGAGGTATGTGGTGGGAGTTGAAGACATAAAAGCATTGAACCTGTTAAATGCCCTTCAAGCAGTAGACAAAGATGCTGCCAATATGGTGACATCACTtttgaaataa
- Protein Sequence
- MNRNQIYDLDKKVYFSDCSTKSAPSTMSATNNRANILPILNFPKYETSSDDITMSYSNLPPQRASVSSGSSAMEIGHSSQLVILEQPTEKFRFRYKSEMHGTHGSLNGDRSERNKKTFPEVELKNFNSAGVIRCSLYQTNIDKPSLHSHQLVVHRDDTDVCDPHDVNVSPEKGYIARFENMGIIHTAKKDIYKELLKKKIKKLKFELQCEQLPQKQEKALRDEAEREAKSMNLNQVRLCFEAFKIVDGNRLVKICEPVFSRPINNRKSALTGELKICRLSIIAGTAAGGDDLILLVEKVNKNNIKVRFYEIVNDEEVWEAFGYFTEADVHHQYAIVVRTPAYKDKDIDSHVNVFIELVRESDNERSSAVTFRYKPRDIVLSRKRRRTSNTSSSTISPLNSYELPESIANGIPQQVQLLKQEPQTISQEFNKEGELKALYGTDSNEYQCQFNSFMQQVDNDSDELVNIIGGPPLLDPDFGFLDFTLEIDGEASPNMRQKRSRPKKHGSNTGQHIKIQTYHPTMKLLISAFNDYSKLGLEKVINKVRTIFEEYVADSDNEDTILHDIVKQGSQSDAIIVLKILSKLNLTNLLSQTNNLRQTPLHVACIFDQPVFIRPLLGLKCDPNVQDSKGNTALHIAIAENLKQCTEGFVSHISSSKLNVNLTNDIGLTPLHLAIRKNNIDFVKILLVKCNASAKIANSSDGNNALHLAVQQHNKEIVKLVLENSNVKLNTTNRAGHTALDLAKTLGGEERTEILQILHAYMPSSTDMSSPTIDFIKEEPEDSSSSTGDDDDKSSQLSIEIKEENEEIYLKQMLKDEKICNQLAQLLNVDNKWKKLGSQLKLDHLMFMFVNAEAMLRYVVGVEDIKALNLLNALQAVDKDAANMVTSLLK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -