Basic Information

Insect: Plusia festucae
Gene Symbol: -
Assembly: GCA_950381575.1
Location: OX494455.1:2763688-2766407[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 3.3e-05 0.0028 18.7 1.5 1 23 285 307 285 307 0.98

2 12 6.3 5.4e+02 2.1 0.2 5 14 356 365 354 369 0.84

3 12 0.0016 0.13 13.4 0.5 1 23 383 406 383 406 0.97

4 12 0.0038 0.32 12.2 2.9 1 23 410 432 410 432 0.98

5 12 0.011 0.91 10.8 0.5 2 23 454 476 453 476 0.92

6 12 0.0056 0.48 11.7 2.0 1 23 480 503 480 503 0.97

7 12 0.018 1.5 10.1 0.3 2 23 526 548 525 548 0.93

8 12 4.2e-06 0.00036 21.5 2.6 1 23 558 580 558 581 0.96

9 12 0.012 0.98 10.7 1.3 2 23 597 618 596 618 0.96

10 12 0.0063 0.53 11.5 0.6 1 23 624 646 624 646 0.96

11 12 0.41 35 5.8 2.6 1 22 652 673 652 676 0.90

12 12 0.083 7.1 8.0 0.1 3 23 735 755 733 755 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	3.3e-05	0.0028	18.7	1.5	1	23	285	307	285	307	0.98
2	12	6.3	5.4e+02	2.1	0.2	5	14	356	365	354	369	0.84
3	12	0.0016	0.13	13.4	0.5	1	23	383	406	383	406	0.97
4	12	0.0038	0.32	12.2	2.9	1	23	410	432	410	432	0.98
5	12	0.011	0.91	10.8	0.5	2	23	454	476	453	476	0.92
6	12	0.0056	0.48	11.7	2.0	1	23	480	503	480	503	0.97
7	12	0.018	1.5	10.1	0.3	2	23	526	548	525	548	0.93
8	12	4.2e-06	0.00036	21.5	2.6	1	23	558	580	558	581	0.96
9	12	0.012	0.98	10.7	1.3	2	23	597	618	596	618	0.96
10	12	0.0063	0.53	11.5	0.6	1	23	624	646	624	646	0.96
11	12	0.41	35	5.8	2.6	1	22	652	673	652	676	0.90
12	12	0.083	7.1	8.0	0.1	3	23	735	755	733	755	0.97

Sequence Information

Coding Sequence: ATGGCATCCACAGACTTCCCAACTCTCACAGACATGGCCGACCTTCAAACAGACACAATGATTAAAGAAGAGGAAATGGACACTGCTAATGAAGACTTACAACTAGAAAttaaatctgaaataaatatagGCGAGACTGTCATACAAGAACATGTTGGTAATCCATTCAAGAATGTCCAGTTACAGGTTAAAGATGAAACAATATCTATAAGTATTGAAACAGAGGATATAGATTCACAGGATGATACTATACCTAAAATGGAATATGTATTAGATCCAAAATCTGAAATGGATGCCATAGATGAAGTTAAAGAGGAAAGGGTGCCAGATGAATCAATAGTAACTTATGACTATCCCAATTTTGATGATGTTGCCAGTATAGATAGCAATGATGCGGCTGCATTGACGCATGTCGAAGCTTGCTTGCAGGATGACATGGAGTATAAATGTGAAGATGATGGCCTCTATGAGgatCATAAGGACGATTACGACAAAATGGATATAAAAGAAGAATCAGATCTAACAGTAACAGAGACAcatttaatatcaaataaactaataaacacTACTTCTACTATTACCAACCCTCACGACGGCCTCATAGAATCTAAAACCACAAAGACTTTAGTAATGGAAATTTTGCCTATACCACAAACAAACATGTCATTTTCCAAAATGGCTGGCAACCCTGAAGAAATTCTTCCAACCAGGTGTAATAATGACGACGATTATTTAGAATACCAAGATTCATTTCAACTTAACTCTATAACTGGGAATGTTCTATCTCTTGAACAAGAAGCTTATGGTCTTCTAAAAGCAACAGGAAAGAAAACGGAATTAGTTGAGGAGCGCTATACCTGCCCAAAATGTCCGAAAACTTATCGCCTAAAGAAATACATGAAGCGGCATTTGGCTGTTCATGATGGCATCGAGAAACGCGCTTTAGGCTTAATAAGAGGTAggataacaaaaaaagaaaatagagatAAGAAGTTGAAAGCAGAACAGGAAACAAAGATGACCATGAAGCAAGAAGAGAAAGTAAAGAAAGAAGGGTATGAATGTACTTGTGGCAAAGTCTTCCAAAGAAGAAGCAGAATGGAAACATGTCTAAGATCCCATAATCTGTTTTCTGACACCAACACCTACCCCTGTGTGTCCTGTTCAAGACAGTTTAAGGATAGAGAAGAATTAGCTTTACATCGAAAGAGGTTACACAGGAAAAAGTTCCCTTGTAAGTTCTGCCCCACCGACTACCACACGCGCAAGGAACTGTTCAAACATCTCCAAGTACATCAAAAAGTTCAGTTAATGGAGTATAAAGTTATTTCAGAAGTTGTTAAAGGGAAACAAAAGCTTAAATGTTTTATGTGTTCCAAAACTTATATGGAGTTGTCTGATCTTAAATCTCATGTTATGGACGACCATAAAGAGCCTTATAGCTGTCCGCGCTGCAAGCGAACGTTCTCGAAAATCATTGATTTCGGTAACCACACGAAAACCTTTCATCCCGAAGTCGAAGGTCAATCTGTTCTGGACGTATTAGAAGCGTTTTCGAAACTTGTGAAAGCTTGGAAATGTGATGAATGCGGCTTACAGTTCCATGAGGCAGATAAACTGGCGATGCATCAAATAGAGAAGCACAGTCCAGAGTTGAAATCGGAAACGCAATTCCAATGCACGGATTGCCGTAGAGTGTTCGCCAGTCAGAAAGCATTGACGTCACACAGACGGATCCACCACAGCACGGAAACCGTAGAAGAGACGGAACTAGTTGAGAAAGGAGTCATGTGCCTTGAATGTAGAAAGATCTGTAAGGATATGAATGCTTTAATATCTCACATGCGGTTCCATTCCCCTGATCGGAAGTATCCCTGCAAATTCTGCGATTTTCGCTTCGCTACGTCCGAGAAGCGGAAAGCACACGCAGAAATACACACAGGCGACATGAAATACGTCTGCTTCATCTGCGAATACCAATGTAGTTCGGAAAATCGACTAAAACAACACAAATTGTCGCCTAAACATATAAACATGAGAGAGTTCTTACTGACCGGTAGACCGTTGACAGAGGAAGCTCATTCATCTAAGCAGGAGAAGATTAAAGATACTTTGAAGAAGAAAGAGTGGGCTGTTAAGAAGAGTAAGAGAAAAGAGGTGAAATCTGAGAGTGACTCAAGTTCTGAGTGTAGTGAGGTTGCTTGTGATATCTGTGGTGATAAGTTTCCCAGTGAAAATGAAATGCTAGAACATAAACAAACTCACCCGTTTATAGAGTTTCCTAATGAGGATAAACCtagtagaatattttttaagtaa
Protein Sequence: MASTDFPTLTDMADLQTDTMIKEEEMDTANEDLQLEIKSEINIGETVIQEHVGNPFKNVQLQVKDETISISIETEDIDSQDDTIPKMEYVLDPKSEMDAIDEVKEERVPDESIVTYDYPNFDDVASIDSNDAAALTHVEACLQDDMEYKCEDDGLYEDHKDDYDKMDIKEESDLTVTETHLISNKLINTTSTITNPHDGLIESKTTKTLVMEILPIPQTNMSFSKMAGNPEEILPTRCNNDDDYLEYQDSFQLNSITGNVLSLEQEAYGLLKATGKKTELVEERYTCPKCPKTYRLKKYMKRHLAVHDGIEKRALGLIRGRITKKENRDKKLKAEQETKMTMKQEEKVKKEGYECTCGKVFQRRSRMETCLRSHNLFSDTNTYPCVSCSRQFKDREELALHRKRLHRKKFPCKFCPTDYHTRKELFKHLQVHQKVQLMEYKVISEVVKGKQKLKCFMCSKTYMELSDLKSHVMDDHKEPYSCPRCKRTFSKIIDFGNHTKTFHPEVEGQSVLDVLEAFSKLVKAWKCDECGLQFHEADKLAMHQIEKHSPELKSETQFQCTDCRRVFASQKALTSHRRIHHSTETVEETELVEKGVMCLECRKICKDMNALISHMRFHSPDRKYPCKFCDFRFATSEKRKAHAEIHTGDMKYVCFICEYQCSSENRLKQHKLSPKHINMREFLLTGRPLTEEAHSSKQEKIKDTLKKKEWAVKKSKRKEVKSESDSSSECSEVACDICGDKFPSENEMLEHKQTHPFIEFPNEDKPSRIFFK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00327353;
90% Identity: iTF_00186597; iTF_00185621;
80% Identity: -