Basic Information

Insect: Plusia festucae
Gene Symbol: -
Assembly: GCA_950381575.1
Location: OX494458.1:691171-694921[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.0031 0.26 12.5 1.3 1 23 252 274 252 275 0.95

2 12 0.16 14 7.1 3.3 1 20 291 310 291 312 0.95

3 12 0.00016 0.014 16.6 1.2 2 23 322 343 321 343 0.97

4 12 3.8e-05 0.0032 18.5 0.5 3 23 353 374 352 374 0.98

5 12 7.6e-05 0.0064 17.6 0.2 2 23 381 402 380 402 0.95

6 12 0.00058 0.049 14.8 4.8 1 23 408 430 408 430 0.98

7 12 3.3e-07 2.8e-05 25.0 1.2 1 23 436 458 436 458 0.96

8 12 2.6e-05 0.0022 19.0 0.8 1 23 464 486 464 486 0.98

9 12 1.1e-06 9e-05 23.4 0.2 1 23 492 514 492 514 0.98

10 12 0.00025 0.021 15.9 0.3 1 23 520 542 520 542 0.96

11 12 4.2e-05 0.0036 18.4 2.2 1 21 548 568 548 570 0.96

12 12 7.1e-07 6e-05 24.0 1.5 1 23 576 598 576 598 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.0031	0.26	12.5	1.3	1	23	252	274	252	275	0.95
2	12	0.16	14	7.1	3.3	1	20	291	310	291	312	0.95
3	12	0.00016	0.014	16.6	1.2	2	23	322	343	321	343	0.97
4	12	3.8e-05	0.0032	18.5	0.5	3	23	353	374	352	374	0.98
5	12	7.6e-05	0.0064	17.6	0.2	2	23	381	402	380	402	0.95
6	12	0.00058	0.049	14.8	4.8	1	23	408	430	408	430	0.98
7	12	3.3e-07	2.8e-05	25.0	1.2	1	23	436	458	436	458	0.96
8	12	2.6e-05	0.0022	19.0	0.8	1	23	464	486	464	486	0.98
9	12	1.1e-06	9e-05	23.4	0.2	1	23	492	514	492	514	0.98
10	12	0.00025	0.021	15.9	0.3	1	23	520	542	520	542	0.96
11	12	4.2e-05	0.0036	18.4	2.2	1	21	548	568	548	570	0.96
12	12	7.1e-07	6e-05	24.0	1.5	1	23	576	598	576	598	0.99

Sequence Information

Coding Sequence: ATGGAAATAGGtgttaaatcatttaaaaagatATGCCGCATTTGTTTAGTAGAATGTGCCGACATGAAATCATTGTTTTCAAAGACTGAAGGCGACGAACGAAACCTATTTCAAATACTAGAGTTTACTGCTAATATTAATGTACAAATTGAGGATAACTTACCGAAACAAGTTTGTTATGAATGTCAAGATGTGATGTGCAAGGCCGACGCGTTCAAACGCCGCTGTCTCGAATCTGAGAAGATTCTAAATAACCTCTGCGAGTTTGGAGGCAGTACAGAAGAAACACAAAgtattattgaaaatgaatgCAGTATTAAACATGAACATAGTGATTTAAGCCAGCAGTTAAGTAATCATGATATTTTCCCACCGAATGATGCCATGCAAGATAGTTTTGATGTGAAAAATGGTGGATTATTAAAAGATATAGCAGAATTTCCATCAAATGAGGCAAATTTCTGTAATATTGACACAAATGTATCAGAAAACTGCGATGTACAAGTGAAAGTAGAAACAATTAACAATTTTGAAGAAGATACCGACTTTTCAAGCCATTACAATGATTCTGAAGCTGTAAAAACAGACTATTTACAAGTGCATACAgccacaaaattaaaaataattttcaaatgcaACTGTGGCTTAATATTTAACTCTaaagatatatataaaactcataCTAAACTaggtaattgtaaaaaaaagaaaataaaacagaaattaagTAAAAAGGCCACTGCAAGAAGTCTGTTCCCTTGCGTTGACTGTAAGCAAGACTTAAAAACTTTATCAGCTTGGAAAACACATCAACAGACGCACCATAATGAGAAAATAGACAAAAATGAAACACAAACACTTGAAGATTCATATCAATGTTTATTTTGCTTATGTACTTTCAAAACTAAAGATTTACTGGACGCACACAAACATGAAAAAATGGAGGACAAGACGGAATTAATCCAATGCTCATTTTGCTTAcgtagatttaaaaataagaccGCACTCTCTGCTCACATACAAAGGCATAAAGAAACGGACAACATAAAACACGGCTGTAAGATATGTAAAAGAGAATTCAAATACAAAGCATATTTAGAAAACCATATTCTGACAATGCATTCAAAGAAAAACAGTCTGTCTTGTGAGGTTTGCGGTCAAAGTTTTACGAATGAACAAACTTTAGAAGCACATAAAGACAGTCactcaaataaaaagaaacaccaGTGCCTGATCTGCAACAAGTTGTTCGTAATGTCTTGCACTTTGAAGGAGCATATGCGGACGCATACCGGTGAGAAGCCGTTCCTGTGCTCACAGTGTGGCCGTGGGTTCAGTCAGAAGACTAATCTGGCGCAGCATATGCGGCGTCATCAGGGCTTGAAACCTTTTAAATGTGAAAACTGTGAGAAGAGGTTTGTTTCAAAAGGCGAGCTCGACGCCCACAACAGAAAACACAGCGGGGCCCACCCATTCGTATGTGACGACTGCGGAAACGGGTTCACTACCTCCAGTGCCCTCGTCAAACACAGACGCATACACACAGGAGAAAAACCATACCTTTGTGATCTATGCCCCATGAGGTTCGCAGCTTCAGGCACTTTGAAGAACCATAGACGTACCCACACGGGTGAAAGACCCTTCCAATGTTCGTATTGTGAGAAAGCTTTTGTGCAGCGCAATGACCTGATCTCCCACATCCGGTGCCACACTGGCGAGAAGCCTTATACATGTCCTCAATGCGGACATTCGTTTAGGAAGGCATCAGCGTTGAAATCTCATGTCAAAATGCATGCGAAGGAGTCAGTGGGCTTAATGCAAGGGGTGATGATTAATGGTATGCAGTGTTCGGAGCAGTGA
Protein Sequence: MEIGVKSFKKICRICLVECADMKSLFSKTEGDERNLFQILEFTANINVQIEDNLPKQVCYECQDVMCKADAFKRRCLESEKILNNLCEFGGSTEETQSIIENECSIKHEHSDLSQQLSNHDIFPPNDAMQDSFDVKNGGLLKDIAEFPSNEANFCNIDTNVSENCDVQVKVETINNFEEDTDFSSHYNDSEAVKTDYLQVHTATKLKIIFKCNCGLIFNSKDIYKTHTKLGNCKKKKIKQKLSKKATARSLFPCVDCKQDLKTLSAWKTHQQTHHNEKIDKNETQTLEDSYQCLFCLCTFKTKDLLDAHKHEKMEDKTELIQCSFCLRRFKNKTALSAHIQRHKETDNIKHGCKICKREFKYKAYLENHILTMHSKKNSLSCEVCGQSFTNEQTLEAHKDSHSNKKKHQCLICNKLFVMSCTLKEHMRTHTGEKPFLCSQCGRGFSQKTNLAQHMRRHQGLKPFKCENCEKRFVSKGELDAHNRKHSGAHPFVCDDCGNGFTTSSALVKHRRIHTGEKPYLCDLCPMRFAASGTLKNHRRTHTGERPFQCSYCEKAFVQRNDLISHIRCHTGEKPYTCPQCGHSFRKASALKSHVKMHAKESVGLMQGVMINGMQCSEQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00186489;
90% Identity: -
80% Identity: -