Pfes007832.1
Basic Information
- Insect
- Plusia festucae
- Gene Symbol
- PGBD3
- Assembly
- GCA_950381575.1
- Location
- OX494436.1:14402279-14420983[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 3.6e-17 5.3e-13 49.6 12.4 1 41 123 163 123 179 0.93 2 5 1.7e-60 2.6e-56 191.8 4.7 58 297 673 909 637 911 0.86 3 5 1.2 1.8e+04 -4.6 10.2 1 39 908 946 908 966 0.87 4 5 0.065 9.6e+02 -0.5 0.7 11 38 1046 1073 1014 1099 0.77 5 5 0.035 5.2e+02 0.4 4.0 128 166 1188 1226 1137 1242 0.57
Sequence Information
- Coding Sequence
- ATGGGGCAGCGATCCGAAGTGGCTACGCCTGATAATAGCGATGAGGAGAGCGGGGATGCCTTCACTGACGCTGACTTCGGGGATTCTGATGATGAAACTATTGTGGACCGACAAGACACAGCCAAAACTTCACACATACCTATCAATGAAACAGTTAACAAAGAAGTTCAGAAAGCCGCTTCTACGAATGGCCACACTAATGGTGATGTTGCAGAGGAACAGCCTAGATTGAATGGCCGCAAAATTAGTGGGAGCCAATCGAGTGATGCTGAAAACCAAAGCTTAGTTTTAACGGATTTGCGCAGAGATTCTCACGGCGATCAGAATCCTTCTATAGTTGGCATTCTCGGCGATCAGCAGAACCATgctgAACAGAGACTAGCGGCGCGGCGCGCTGCTCGTGCTGAGGCCAGGGAGATCCGCATGCGGGAGCTAGAGCGGCAGCAGCGGGAACAGGAGGACCATGCGGACAAAGCATACGACATaAAGCGACCTTTGAGAGCCCTCAATCTAAACGAAATAGTTGATGAGTTAGAGCGATGTGAAGATGATAATTTGATGCCAACTCAAATCACAATTTTCCCACCCGAGAACGCTAATGCTGACGTCACTGATGAAGATTCTGGGGACGAAGAATTCGTAGCATTGCAAAATCTACCAGgctcTCAACTTAGAGCTCCGGCTGAGGTCACATATCATTCGAGTTCCGACGAAGAAGATGACGTGCCTTTGTCAAGTTTGTCTAAAAAAAGGCGCACGATGGATATGACTGCAGACGGTAGTGACGCCATAGCTTCTAGTTCCACAGCTTCTCCCACTACGTCAGGTGTGGCAACAAGTTCTACATTTGTTCAGCCATCAGTTCCCCGAAACCAAACCTATAGATGGAGGAATCGTCACATTCCGAACCAGTTCAATCAATGGAATGACGAACAAGGTCCAAGATACTTACAACCACCCTTATATTATTTCGATTGCATGTTCAACGACAATGTTATTGAGTTACTAGTGCGATATACAAATTTGTATGCAGGACAGAGGAATAAAGTGGGTAATGTAACTGTCTCTGAAATGAAGTGTTTCTTGGGTATTCTCATGTACAGCGGGTATGTTATTGTACCTCGTCGATTTATGTATTGGGAGACATCTTCAGACGCTAATTTTAGTATTGTGCACAACGCTATGGCAAGAGAtcgttttacttttataatgtcCAATCTTCACTTCtgtgataatgcagttctcagaGATTCTCCTGATAAATTCGCTAAGTTGAGACCACTGtttgatgaattaaataaaaactttgctgAAATGGCACCCTTGGAAGAGAACTACAGCATAGATGAGGCCATGGTACCATATTATGGACGCCACAGTTGCAAACAGTTTATTCGTGGCAAACCAATTCGTTGGGGATATAAACTGTGGGTTGGTGCTACAAGATTAGGCTACGTTTTATGGTTTGATCCTTACCAGGGAAAATCTTCAACCATTGCAGAAGGCTACAAACAGTTTGGTCTAGGTGGTAGTGTGATTTTAGAATTTGCTGATGTTCTACAAGGTCGTCACCCAACATTGCCATTTCATTTGTTCTTCGACAACTATTTTTCCTCTATTCCTCTACTGCATGAGCTTGGTAATAGGGGCCTGAGAGCAACTGGCACTGTACGTGAAAATAGAACGTCCAAGTGTCCTCTCGAGGCCAATAAAGATTTCAAAAAGACTGAAAGAGGTTCATTTGTATACAAATCTAGTTCGCCTAATAGTATTTTGGTTTGCAAGTGGAACGACAACAGTGTTGTCACTGTtgcctcgaatactgaaactgtgGAGCCCTTGCATAAAGTAAAGAGATTTTCGCAAGAACTTAAAAGATTTGTACACATTGAACAACCGTCGGTCATTAGACAGTACAATGAAAATATGGGAGGAGTTGATAGGTCGGATCAGAATATAGGGTTGTATCGAACTTCTATACGTGACCCGGTGGGTCGCCGCGGTGGCAGCCGGCTGGCGGCGCTCAGTCCCGCCGGCGTGCACTCGCCGAGGCGCAGCTCTGAGGACTCCGCTGATGACACATTCAGCATCAAGGACCTCAGGCATGATTTGAAGGAGGTCGAGGAGAAGTTCCGGAAAGCGATGATATTGAATGCACAGCTGGACAATGATAAGGCGGCACTAGGCTACCAGCTGGAACTACTCAAGGACAGGATAGAGGAGCTACACGAAGAGTACGCGCAACTACAGCGCGAGCATAAAGAGAAGTGCTCATCATTCGAGCGTCTAAAGCGCGAGCACGAGTCTGTGACACGAGAACTAAACGCGGCGCGAGGCGCGGTGCGAGCGCGGGACGcggccgccgccaccgccggcTTCGCCTTCGTTGACGCCCCCGCCGAGACCCCCGCCACGCCCGGGACCCCCGCCACGCCGGGGACCCCTGCCGCCCCCGAGCCCGCTCTGGCGCTCGTCAGCCACGGAGCCGAGCAGCTGCTCAATGATGCCGGCGAGGGCACGCTCGACGTGCGGTTGCAAAAGCTTTTGAGCTCGAAACAGTCGCTAGAGTCGGAAGTACGTAAACTGAAGCTGCAGCTGAACGAGGAGCGCGCGGCGAGACAGAACGGAGTCTCCAACCACCACGAACACGAATACGAGAACGAACTGGAATCTGCGCGCAAAGCGGTGTCGGAAGCTAAAGCCCGAGCGGCGCGTGGCGAAGCGGAGGCGGCCCTGCAGGCGGCGCTAGTGGCGCGGCTGGAGGCGCAGCTGGCGCGCCTGCGGGCGAGGCAGGACCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGCCGCCGCCTGCAGCGAGAGGGCGCTGGTGGCGCGGCTGGAGGCGCAGCTGGCGCGCCTGCGGGCGAGGCAGGACCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGCCGCCGCCTGCAGCGAGAGGTACGCACACTACAACAATACTAGGGCGCTGGTGGCGCGGCTGGAGGCGCAGCTGGCGCGCCTGCGGGCGAGGCAGGACCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGCCGCCGCCTGCAGCGAGAGGTACGCACACTACAACAATACTAGGGCGCTGGTGGCGCGGCTGGAGGCGCAGCTGGCGCGCCTGCGGGCGAGGCAGGACCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGCCGCCGCCTGCAGCGAGAGGGCGCTGGTGGCGCGGCTGGAGGCGCAGCTGGCGCGCCTGCGGGCGAGGCAGGACCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGCCGCCGCCTGCAGCGAGAGGTACGCACACTACAACAATACTAGGGCGCTGGTGGCGCGGCTGGAGGCGCAGCTGGCGCGCCTGCGGGCGAGGCAGGACCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGCCGCCGCCTGCAGCGAGAGGTACGCACACTACAACAATACTAGGGCGCTGGTGGCGCGGCTGGAGGCGCAGCTGGCGCGCCTGCGGGCGAGGCAGGACCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGCCGCCGCCTGCAGCGAGAGGCTCGGGAAGCGCTCAATCGGGTAGAAGAATTGGAAACTGAGAACAGCCACCTCACTAAACGACTAGACAAGCTTAAGAACGCCAAGTCAGCTCTCCTGAAGGATCTGTGA
- Protein Sequence
- MGQRSEVATPDNSDEESGDAFTDADFGDSDDETIVDRQDTAKTSHIPINETVNKEVQKAASTNGHTNGDVAEEQPRLNGRKISGSQSSDAENQSLVLTDLRRDSHGDQNPSIVGILGDQQNHAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDIKRPLRALNLNEIVDELERCEDDNLMPTQITIFPPENANADVTDEDSGDEEFVALQNLPGSQLRAPAEVTYHSSSDEEDDVPLSSLSKKRRTMDMTADGSDAIASSSTASPTTSGVATSSTFVQPSVPRNQTYRWRNRHIPNQFNQWNDEQGPRYLQPPLYYFDCMFNDNVIELLVRYTNLYAGQRNKVGNVTVSEMKCFLGILMYSGYVIVPRRFMYWETSSDANFSIVHNAMARDRFTFIMSNLHFCDNAVLRDSPDKFAKLRPLFDELNKNFAEMAPLEENYSIDEAMVPYYGRHSCKQFIRGKPIRWGYKLWVGATRLGYVLWFDPYQGKSSTIAEGYKQFGLGGSVILEFADVLQGRHPTLPFHLFFDNYFSSIPLLHELGNRGLRATGTVRENRTSKCPLEANKDFKKTERGSFVYKSSSPNSILVCKWNDNSVVTVASNTETVEPLHKVKRFSQELKRFVHIEQPSVIRQYNENMGGVDRSDQNIGLYRTSIRDPVGRRGGSRLAALSPAGVHSPRRSSEDSADDTFSIKDLRHDLKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELHEEYAQLQREHKEKCSSFERLKREHESVTRELNAARGAVRARDAAAATAGFAFVDAPAETPATPGTPATPGTPAAPEPALALVSHGAEQLLNDAGEGTLDVRLQKLLSSKQSLESEVRKLKLQLNEERAARQNGVSNHHEHEYENELESARKAVSEAKARAARGEAEAALQAALVARLEAQLARLRARQDHQDEHEEQLKQERRRLQREGAGGAAGGAAGAPAGEAGPPGRARGAAQAGAPPPAARGTHTTTILGRWWRGWRRSWRACGRGRTTRTSTRSSSSRSAAACSERYAHYNNTRALVARLEAQLARLRARQDHQDEHEEQLKQERRRLQREGAGGAAGGAAGAPAGEAGPPGRARGAAQAGAPPPAARGTHTTTILGRWWRGWRRSWRACGRGRTTRTSTRSSSSRSAAACSERYAHYNNTRALVARLEAQLARLRARQDHQDEHEEQLKQERRRLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -