Pfes014293.1
Basic Information
- Insect
- Plusia festucae
- Gene Symbol
- -
- Assembly
- GCA_950381575.1
- Location
- OX494444.1:540117-546125[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 6.9e-12 2.2e-09 37.6 0.0 4 39 123 159 120 163 0.90 2 4 1e-10 3.1e-08 33.9 0.3 2 39 175 212 174 216 0.92 3 4 1.3e-15 4e-13 49.5 0.3 2 45 230 274 229 274 0.96 4 4 1.7e-17 5.3e-15 55.6 0.0 1 42 281 323 281 325 0.95
Sequence Information
- Coding Sequence
- ATGAACCTGTGTGGCCACCAGGGCAGTGGCTTGGAGGAGCTGGCACCGCTGGCGCCGGCGGGCCCGGCCGCCACGCCCGTCTGCGTCAAGCAGGAGCGCGCCGACTCCCCACCGGCCTCCACACTCGAGACCCTAGAATCAGCGCCTTATAATGCTAAGAGTGCAGTCCTGCTGGACAGACATATGGAGTTCATGCACGCGTGCGACATGCAGGACTCCACGGACTTCATGCCGTTGCTGGCAGTCAAGGATGAACCGTCGTCTGAAGGAGAACAACCGCAATTAAGTGGTGAGGACACCAGCGACTCGTGCGGCCGTCAGGCTTCGCCGGCACCACGGCACAGCCCCAAGAGCTGGACGCAGCATGACATGGAAAGAGCCCTGGATGCGCTACGGAATCACCAGATGAGCCTTACTAAGGCATCAGCGACGTACGGAATCCCGTCCACGACGCTATGGCAGCGAGCGCACCGGCTCGGCATCGACACTCCCAAGAAGGAGGGCGCCGCCAAGTCCTGGAGCGAGGCCGACCTTAGGGGGGCCTTACATGCGCTTAGAGCAGGAGCCATATCTGCTAATAAGGCCAGCAAGGCATATGGCATCCCGAGCAGCACGCTGTACAAGATAGCGCGGCGCGAGGGCATCCGGCTGTCGGCGCCGTTCAACGCGGCGCCGGTGTCGTGGCGGCGCGCGGacctggcggcggcgctggCCGCCATCCGCGCCGGCGCCGCCTCCGTGCAGCGCGCCGCCGCGCTCTACGGCATCCCCACCGGCACGCTGTACGGGAGGTGCAAGCGGGAAGGCATCGAGCTGTCTCGCTCCAACCCCACGCCCTGGTCCGAGGACGCTATGGGGGAAGCACTTGAGGCTGTCAGagTGGGCCAGATGTCTATAAACCAGGCAGCGATCCACTTCAATCTGCCTTACTCCTCACTGTACGGAAGATTCAAGCGATGCAAATATCAGATGCAGGGGTTACCTCAAAGCCAACAGCAGCCGCAGCCTGACCTCAAGATAGAGGAACATCCCTCCCTGGAGGTCCCTCAGTTCTTCCCGACGTCTGAGCCCGACCCCCACTCGTATTCCATCATGCACGAGTACCCACACGACCAGTACACGCAGTACTACCACACCTTTAATGGCATCGCCACGAGCTGA
- Protein Sequence
- MNLCGHQGSGLEELAPLAPAGPAATPVCVKQERADSPPASTLETLESAPYNAKSAVLLDRHMEFMHACDMQDSTDFMPLLAVKDEPSSEGEQPQLSGEDTSDSCGRQASPAPRHSPKSWTQHDMERALDALRNHQMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGAAKSWSEADLRGALHALRAGAISANKASKAYGIPSSTLYKIARREGIRLSAPFNAAPVSWRRADLAAALAAIRAGAASVQRAAALYGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRVGQMSINQAAIHFNLPYSSLYGRFKRCKYQMQGLPQSQQQPQPDLKIEEHPSLEVPQFFPTSEPDPHSYSIMHEYPHDQYTQYYHTFNGIATS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00041698;
- 90% Identity
- iTF_00185231; iTF_00186059;
- 80% Identity
- -