Pint015155.1
Basic Information
- Insect
- Plodia interpunctella
- Gene Symbol
- nfxl1
- Assembly
- GCA_027563975.2
- Location
- CM050484.1:6566318-6568816[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 1 2.2e+04 -7.8 5.6 15 19 134 138 133 138 0.81 2 19 0.033 7.1e+02 0.6 0.4 4 10 169 175 168 175 0.96 3 19 1.6e-07 0.0034 17.6 15.9 3 19 186 202 185 202 0.95 4 19 1.6e-08 0.00034 20.8 11.6 1 19 237 255 237 255 0.93 5 19 2.7e-09 5.9e-05 23.3 12.4 1 19 290 308 290 308 0.99 6 19 5.9e-07 0.013 15.8 18.3 3 19 345 361 344 361 0.93 7 19 0.53 1.2e+04 -3.2 1.1 15 19 376 380 375 380 0.83 8 19 1 2.2e+04 -5.3 2.2 5 10 384 389 384 389 0.88 9 19 2.7e-06 0.059 13.7 18.3 1 18 395 412 395 413 0.97 10 19 2.5e-10 5.5e-06 26.6 13.0 1 19 422 440 422 440 0.99 11 19 0.00043 9.4 6.6 7.6 10 19 489 498 486 498 0.93 12 19 0.001 23 5.4 8.6 1 12 508 518 508 518 0.96 13 19 0.16 3.4e+03 -1.5 3.5 14 18 547 551 547 552 0.87 14 19 0.064 1.4e+03 -0.3 0.4 7 12 567 572 567 572 0.86 15 19 0.00033 7.1 7.0 2.9 1 11 588 598 588 599 0.97 16 19 0.38 8.2e+03 -2.8 1.6 15 18 613 616 612 617 0.83 17 19 0.0099 2.1e+02 2.3 14.3 4 18 630 645 628 646 0.82 18 19 1.7e-05 0.36 11.2 12.1 1 16 687 701 687 707 0.86 19 19 1 2.2e+04 -4.5 1.0 6 10 737 741 737 742 0.84
Sequence Information
- Coding Sequence
- ATGGCTCGACGCTACCGAGATGCAGCAGCAAAATTGCAGCAAAACGTGCAAAAACATTTGGATGTGATGAAGGACCTATCTTCTTCAGAAGATGAGGAACCTTTCGAGTCTTCGGTTATTGAAGGAGTGTTCCAAAGCTACTGGAGAGGTGGCGGTGACACGCATTTACTAAATCGGACGAAAAATCTGCTGGAAGAGGCGATTAGTGGCCGACCAATAACATGTCTGATTTGCATAGGAAGTATTAAAAGATCGGATGCAATATGGACTTGTGACCATTGCCACTGTTATTTCCATCTGTCCTGTATCCAAAAATGGTCGAATGACAGCATAAGTTTAAGACTTGAGGACCCTCAATCGCCTATTTCGGTGTTTAAACCCAAGAAAATCGATTGGTGCTGCCCGAAATGCCGGCATTCGTATTCTAAGGAGGAAATACCTCGTAAGTACCGTTGCTTTTGTGGAAAAACTGATGATCCACCTGTGCATCCTTGGTTGATACCACATTCTTGTGGAGAAGTCTGTGAAAAGAGGTTGTCTGAAGGAGATAATTGTAAACATAAGTGTTTGCTCCTCTGCCACCCCGGGCCATGTCCCCCATGCCCTCAAACTGTTAATGGAGTGTGTTATTGTGAGAAAGAACGGAAAAAAGTTAGATGCAGTGCTGCTAAATGGTCTTGTGGACAACAATGTAAGAAGACATTGCTCTGTAACTCGCATAGATGTGAGATCATCTGTCATGAAGGAGATTGCCCCCCTTGTACGTACACAAGTGAGCAGTTGTGCCAATGTGGCTCTGAGAAGGTTAAGAGGCCATGCGATGACCCTGTTTGGCATTGCAGGAAACCATGCAACAAACCTTATTCTTGTGGCTTTCATAAGTGTGAAACAGTGTGTCACCTGGGGCCCTGTGGGTCATGTCCCAATACAGGGACTCGCTCCTGCCCATGTGGAGCTAACCAGCGCTTTGTGCAATGCCCGGATGTTATGGAAACCTGTTTAGgaacttgtaataaaaagcaTGAAGGTTGTGAACATAATTGTCCAGAAAAATGTCATAAGGGACCGTGCCCACCTTGCCAAGTTTTGATTCTAAAGAAATGTCTATGTTCAGCACATGTTCGCTGTCTACCATGTAGTAAagattataaatgtgaaaccAAATGCAGAGGCACCAGACCCTGTGGTAAGCATGCTTGTGGGAGGAAATGCTGTAATGGTAACTGCCCTCCTTGcgaaaaaatatgtgataagCCTCTGCAGTGTGGTCGTCATAAATGCACCATGGTCTGCCATCGTGGTCCATGCTACCCTTGCCCACTTGAATCCAAAGTTACTTGTAGGTGTAAAGAAACATACATAACAGTGCCATGTGGTAgagaaaaacatacaaaaccaCCAAAATGCAgtcttttatgtaaaattaaatacaagtgTGGACATATGGATGAGAATAAGCATGGTTGCCATTTCGGGGACTGTCCTCCGTGCAAGGCTGTATGTTTCAAAATGTATCCGAAATGTGGTCACGAATGCAAAGCAACTTGCCATGAATTCGTAGCTGTGGTCTTCAAGCAAGTTGCGAAGCCAGCAACACCATGGGAAATTGAGCCTccaaaaaccaaaataatgGCTTTGGACTGTCCTCCGTGTGAGACACCCGTTTCTCTCGTCTGCTTTGGAGAACATGAGACTGAGCAGCAGCCGTGCCATTCAGCCAAGCGCCGATGCTGTGGCCGGCAATGTGGACGTCCACTAGCTTGCAGCAATCATGTTTGCTCCTTACTCTGTCATCTATATTCACACAATCCTAATTATCCAAATGTGCCTTACAGTTGCAAGCCTTGTGATAAAGAATGCCTTGTACCCCGCCCAGCAAAATGCGCAcacaaatgttacaaaaagCAATGTCACCCAGCACCTTGCCCACCGTGTGAGATACTAGAAAGGATTGCATGTCATTGCGGAGTTACTGAATTATATTTACGTTGCAAAGAACTTAGTGATGCTACTGAAGAAATGTTGTCATGTAAGCAGCAGTGTcctaaaaatttgaaatgtggCCACAGATGCCGTAATAACTGTCATTCTGGTGAGTGTGGTGTTGGACAGACGTGCATGAAGAAGACAAAAGTTAACTGTGCTTGTGGAAATTTGAGGAAAGAATTCCCTTGCAATGTGGTCAAGAGTGGAAAGGCAAAGTTGGACTGTGATGAAACATGTGAAGCGAAAAAGGTTGCAATGAAACTAGAGAAAGAGAAGGAAATGTTGAGACAGAAAGAAATACAAGAAGAACAGAACCGTAGAGAATTGGCAGAGTATGAGTGGAAGTTGAGTGGGAAAAAGAAGAAGTATAAGGAGAAAAAAGTTGTTGCTAATGTGGACAAtcgaaattttgtacaaaagtatggtattttgattttgaccaTGGCAGTTGGTGTTTCAGggattgcatattttttattttgtatggagAAAGATTTGATCTTGTCCGATTGA
- Protein Sequence
- MARRYRDAAAKLQQNVQKHLDVMKDLSSSEDEEPFESSVIEGVFQSYWRGGGDTHLLNRTKNLLEEAISGRPITCLICIGSIKRSDAIWTCDHCHCYFHLSCIQKWSNDSISLRLEDPQSPISVFKPKKIDWCCPKCRHSYSKEEIPRKYRCFCGKTDDPPVHPWLIPHSCGEVCEKRLSEGDNCKHKCLLLCHPGPCPPCPQTVNGVCYCEKERKKVRCSAAKWSCGQQCKKTLLCNSHRCEIICHEGDCPPCTYTSEQLCQCGSEKVKRPCDDPVWHCRKPCNKPYSCGFHKCETVCHLGPCGSCPNTGTRSCPCGANQRFVQCPDVMETCLGTCNKKHEGCEHNCPEKCHKGPCPPCQVLILKKCLCSAHVRCLPCSKDYKCETKCRGTRPCGKHACGRKCCNGNCPPCEKICDKPLQCGRHKCTMVCHRGPCYPCPLESKVTCRCKETYITVPCGREKHTKPPKCSLLCKIKYKCGHMDENKHGCHFGDCPPCKAVCFKMYPKCGHECKATCHEFVAVVFKQVAKPATPWEIEPPKTKIMALDCPPCETPVSLVCFGEHETEQQPCHSAKRRCCGRQCGRPLACSNHVCSLLCHLYSHNPNYPNVPYSCKPCDKECLVPRPAKCAHKCYKKQCHPAPCPPCEILERIACHCGVTELYLRCKELSDATEEMLSCKQQCPKNLKCGHRCRNNCHSGECGVGQTCMKKTKVNCACGNLRKEFPCNVVKSGKAKLDCDETCEAKKVAMKLEKEKEMLRQKEIQEEQNRRELAEYEWKLSGKKKKYKEKKVVANVDNRNFVQKYGILILTMAVGVSGIAYFLFCMEKDLILSD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00737154;
- 90% Identity
- -
- 80% Identity
- -