Pint005784.1
Basic Information
- Insect
- Plodia interpunctella
- Gene Symbol
- kn
- Assembly
- GCA_027563975.2
- Location
- CM050470.1:4120414-4129513[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.2e-18 5.6e-14 51.6 4.6 182 209 6 33 3 34 0.96 2 2 5.3e-16 5.7e-12 45.0 0.2 387 444 33 88 32 134 0.77
Sequence Information
- Coding Sequence
- ATGCTTGGGTTTGTTCGGTTTTTCCTGAAATTTTTCTTGAAGTGCaatcaaaattgtttaaagAATGCCGGCAACCCTCGAGACATGCGGAGGTTTcaagaaataattttaaaaagagcTGCTGATCTGGCCGAAGCCCTGTACTCGATGCCTCGGAACAACCAGCTAGGGCTAGGAGCACCTCGCTCTCCTCCTGCAAGCATGCCTTTCAACTCCTACACCGGCCAGCTGGCCGTCAGTGTCCAGGACACTGCTGCTTCCCAGTGGACTGAAGTGTCCCTCGGACCGTACCACCCAGCGAACATGAATGGACACTTACCCTCTGACCATCACTATAACGCGTATAATACGAAAGATAGCGGGCATTACACTCAAAGAAATGGAAGTTCAAAAGAGGCTGACTGTCCAGCAAACAGTCATACAAAATGCAATGCCAGTGATGTGAAAGAGACAAAAGATGGCAAACTGAGAAGCGCCTTTGCCGCAGTGAGGCACAGCCAGCACCAGAATTGGCAGAATTTAGCTGTTCAGTGTTAG
- Protein Sequence
- MLGFVRFFLKFFLKCNQNCLKNAGNPRDMRRFQEIILKRAADLAEALYSMPRNNQLGLGAPRSPPASMPFNSYTGQLAVSVQDTAASQWTEVSLGPYHPANMNGHLPSDHHYNAYNTKDSGHYTQRNGSSKEADCPANSHTKCNASDVKETKDGKLRSAFAAVRHSQHQNWQNLAVQC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00818937; iTF_00409076;
- 90% Identity
- -
- 80% Identity
- -