Camp009480.1
Basic Information
- Insect
- Cydia amplana
- Gene Symbol
- kn
- Assembly
- GCA_948474715.1
- Location
- OX419664.1:9235207-9252169[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.1e-18 6.4e-14 51.6 4.7 182 209 8 35 6 37 0.96 2 2 6.1e-16 7.7e-12 44.8 1.6 387 474 35 121 34 188 0.66
Sequence Information
- Coding Sequence
- ATGCGGTTTTTCCGAAATTTCAGATTTTTCCTGAAGTTCTTTTTAAAGTGCAATCAAAATTGTTTGAAGAATGCCGGCAACCCTAGAGATATGAGAAGATTTCAAGAAATAATCCTAAAAAGAGCAGCAGACTTGGCAGAAGCGTTGTACTCCATGCCCAGAAATAACCAGCTCGGTCTCGGCGCTCCTCGGTCTCCACCATCGAGCATGCCTTTCAACTCCTACACGGGCCAGCTAGCTGTCAGTGTGCAGGATACAGCAGCATCGCAGTGGACTGAAGTGTCCCTGGGCCCGTATCATCCTGCGAACCTGAATGGACATTTATCATCTGACCATCACCACTATAACGCGTATAACACGAAAGATAGCGGGCATTACAGTGAAAGAAACGAGAATTCAAAAAGCTCGGCTGACTGTCCGGCAAACACTCATACAAAATGCACCGCGAGCGATATGAAAGGGGAGGAGAGTAAAGAGACTAAGCTAAGGAGCGCCTTTGCGGTCGTCAGGCAGAGTCCGCCGCGCGCCGCCAATTTTCAACATCATCAGAACTGGCAACACCTCGCCGTTCAGTGTTAG
- Protein Sequence
- MRFFRNFRFFLKFFLKCNQNCLKNAGNPRDMRRFQEIILKRAADLAEALYSMPRNNQLGLGAPRSPPSSMPFNSYTGQLAVSVQDTAASQWTEVSLGPYHPANLNGHLSSDHHHYNAYNTKDSGHYSERNENSKSSADCPANTHTKCTASDMKGEESKETKLRSAFAVVRQSPPRAANFQHHQNWQHLAVQC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01220442;
- 90% Identity
- -
- 80% Identity
- -