Pint005321.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Plodia interpunctella
Gene Symbol
Rel
Assembly
GCA_027563975.2
Location
CM050469.1:7428361-7449309[+]

Transcription Factor Domain

TF Family
RHD
Domain
RHD domain
PFAM
PF00554
TF Group
Beta-Scaffold Factors
Description
Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.5e-35 1.5e-31 109.9 0.2 1 168 51 218 51 219 0.84

Sequence Information

Coding Sequence
ATGTCTTCTAGTGGTCAGGATATTGAAACATCCAGCGTAGACTCTCCTCAGTCCCACTGCGAGTCTCCTTATAGTTCTCCATCTCAACAAGTGCCGCATTTGGCGTTTACTTTAACCACACTTAACATGAGTACAGCATGCCAGCCATTTCTGCGAATAGTCGAGCAGCCGCAGGACCACTTCCGGTTCCGCTACAAGAGCGAAATGGTGGGCACGCACGGCTGTTTGCTTGGCAAATCCCAAAATTCGTCAAGGAACAAAACTCACCCCACAGTAGAGCTAGTGAACTATCCCGGGCGGGCTGTCATCAGGTGTCGACTGGCCCAGGACAAGAATTCAGGCGAGCACCCCCACAAACTCCTGGAGGAGGAGCAGGATCGAGATGTGAGCTATGAGGTGCCTGAACAAGGCAGCTACAAAGTCGGGTTTGGCGGCATGGGTATTATACACACGGCCAAGAAAGACGTCCCCGGGTTGTTGTATACTAAATATGCTCAAATGAACACCCAGATGTCTCTAAAAGAGcTCCGTGCGCACTGTGAAAGTGAAGCGAAGaagataaacttaaatattgttCGTCTAAGATTCAGCGCGCATGATATCAATACTGATGCGGAAATTTGCCCGCCAGTGTTTTCAGATCCCATCCACAACATgaAAAGCGCGTCAACCaatgacttgaaaatttgccgCATCAGTAAGACCATTGGCCGGCCCATGGGTGGTGATGATGTCTTTATATTCGTGGAAAAAGTCAATAAAAAAAACATAAAGATACGGTTCTTTGAATTAGCTCCGACCGGAGAAGAAGTGTGGCACGCCTATGCACACTTTTTGGAAAGCGATGTCCATCACCAATATGCGATAGCATtcagCACGCCGCAATACAGAGACCCCTACACAAGCTCCGATGTGACTGTGTACTTCGAACTGCAACGGCCACAGGATGGCCGAACCAGCGACCCGAAGGAATTCAAGTATAAAGCTGAAGTAGCGTGCAAACTGCAGAACAAAAAACGGAAAGCAAATTCGTCGTATTCGTCGATTAATTCAAACAGCAGTTCCATGAAGAGCGATGTTCCAGCCACTGTCATGctaCAGGCCTGTAACGGAGCGTTCGATGGTTCACATGATGTGGACATGGCCGCTACCACAATACAATCGATACCGCAATTGCCCATCGGCAACAACTCGCCCCACAGCGACCTCGGCGACGCTTTGTTGTTAAACTTATCCGCCAACACGAGTCCGGCCGAGCGCCACTTTTACAACGACAATCCGGTGCTAGCGCAGTGTAACGTGCCTATGCACTCTCTACCCGATTTTAACTCTACGGAGCTGAAACAGATATTAGAACACAATTCTGATATGACGGCTGAGGAAAAGATGAGATTCTCCGAAGCTGATTGGTCCaAGTACCTAGAATCGTTTGGGAGCTTGCCGGAAGAgacaAACAGCATGTCTTTCATAAGagatagtttgattcctgacTCTGGCGTCAATAAGgGTGGTGCTACTCAAAGTACAAATAAAGCATCGAATTCTTCCCAAATGGCTGTCGAGACCCAAGCAGACGTcgacaaattcaaattgaatatattCGACAAAATAAAGGGCCAGGAGAAACCGTTCTATAAAGCGGAAGATGGACAGGAAGTCAAAAAGttggTAGTCGAATTAGTAGAATTGATGAGGAAAACGCCGCTGAAGAAGAATGTCATTCGAATCAAGCTCGAACGACTGGTGGAGAAGCGGCTGTCGAACGGAGACACGTTTTTGCACATGTCACTCAACAGCAACCGCCCAAGTTTCGAATATATCGTCAAGATGGCTCACCACCTGGGGATGACACACCTCCTAAACTTGCAAAATAATAGTCtacaaacaatattacatCTGGCTATAGTCGCCGAGGAGCCAACGCTTGTTGCGTTCCTTATTAGTAaagGCTGCGATCCGATGTTGGAGGACGAGCACGGCAACAAGGCGATACACTACGCGGTGATGTGTCGCGAAGATGCCTCGTGCCTCGACTCGCTGCTGCAGGCCATACGGAGACATGGGGTGCCTCACGACATCAACACTAGTATCGGTGATAAGCACATTACGGCCCTCCACCTTGCAGTGACATACAAATCGGTTGCGAAGACACAATGCCTTTTGAAGCACGGCGCTAGCTGCAGTGTGACAGATAGCGACGGCCGCACTCCGCTACATGTCGCCGCCAAGATGAACTACCGGCTCGTGATGGCTAAGCTTCTGGACTACGTGCCAAACCATGTGATTGAAGCAGTTGACGGGCGAGGTTACACCGCTCTGCAGATCTTGTGTGACTGCAGCGTGCAAGAGGATACGGTCGAAATGGTCAAGATGCTACTCGATAAGAAGGCGGACCCTCGTGCCCATAGGCCCCAGTCCGCGTGGCATCTGGCCCGGAACAAACCTCGACTGCGTGAAGTGATGCAGCCTTTTATTGGTGATGACGTCATGGACGAGGACGATATCAAGTCCGAACCGGATGACGATATCAAGTCTGAGCCTGAAGTCGATTCCGGTGACgagTACGTAGAAGCAGAGATGTGTCTACCGGAGCTGTCGTCGTATATATCGGAGTTGTCGACAGCCATGGACGCGTCCGGTGCGTGGAGAGCGCTCGCCGCCAAACTCTCCTTGGACTCCATGTCCTCCTGGTTCCAGAACACGGCCAACCCCTCAAGAACCCTGCTGAATTTCCTCAAGCAAAGTGACAGCGACATCACATCCAGATCTCTCGCCACAACGCTCGAAGAATTAGGAGAAAGGGAAGCGGCAAATATCATAAGGAAATacattgattaa
Protein Sequence
MSSSGQDIETSSVDSPQSHCESPYSSPSQQVPHLAFTLTTLNMSTACQPFLRIVEQPQDHFRFRYKSEMVGTHGCLLGKSQNSSRNKTHPTVELVNYPGRAVIRCRLAQDKNSGEHPHKLLEEEQDRDVSYEVPEQGSYKVGFGGMGIIHTAKKDVPGLLYTKYAQMNTQMSLKELRAHCESEAKKINLNIVRLRFSAHDINTDAEICPPVFSDPIHNMKSASTNDLKICRISKTIGRPMGGDDVFIFVEKVNKKNIKIRFFELAPTGEEVWHAYAHFLESDVHHQYAIAFSTPQYRDPYTSSDVTVYFELQRPQDGRTSDPKEFKYKAEVACKLQNKKRKANSSYSSINSNSSSMKSDVPATVMLQACNGAFDGSHDVDMAATTIQSIPQLPIGNNSPHSDLGDALLLNLSANTSPAERHFYNDNPVLAQCNVPMHSLPDFNSTELKQILEHNSDMTAEEKMRFSEADWSKYLESFGSLPEETNSMSFIRDSLIPDSGVNKGGATQSTNKASNSSQMAVETQADVDKFKLNIFDKIKGQEKPFYKAEDGQEVKKLVVELVELMRKTPLKKNVIRIKLERLVEKRLSNGDTFLHMSLNSNRPSFEYIVKMAHHLGMTHLLNLQNNSLQTILHLAIVAEEPTLVAFLISKGCDPMLEDEHGNKAIHYAVMCREDASCLDSLLQAIRRHGVPHDINTSIGDKHITALHLAVTYKSVAKTQCLLKHGASCSVTDSDGRTPLHVAAKMNYRLVMAKLLDYVPNHVIEAVDGRGYTALQILCDCSVQEDTVEMVKMLLDKKADPRAHRPQSAWHLARNKPRLREVMQPFIGDDVMDEDDIKSEPDDDIKSEPEVDSGDEYVEAEMCLPELSSYISELSTAMDASGAWRALAAKLSLDSMSSWFQNTANPSRTLLNFLKQSDSDITSRSLATTLEELGEREAANIIRKYID

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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