Pnir059646.1
Basic Information
- Insect
- Pleistodontes nigriventris
- Gene Symbol
- Bgb
- Assembly
- GCA_903653215.1
- Location
- CAHLDJ010000557.1:65626-66160[-]
Transcription Factor Domain
- TF Family
- CBF
- Domain
- CBF_beta domain
- PFAM
- PF02312
- TF Group
- Beta-Scaffold Factors
- Description
- Core binding factor (CBF) is a heterodimeric transcription factor essential for genetic regulation of hematopoiesis and osteogenesis. The beta subunit enhances DNA-binding ability of the alpha subunit in vitro, and has been show to have a structure related to the OB fold [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.9e-33 6.4e-29 102.6 0.2 93 162 3 72 1 76 0.96
Sequence Information
- Coding Sequence
- atggATATGgtTCATCTGAAATCACATTTGATAATGAATGGCGTATGTGTGACGTGGCGTGGTTGGATTGACCTGGAACGCCTTGATGGCGTTGGTTGTCTGGAGTACGACGAAGAACGTGCCGCTGAAGAAGACGCACTCTTGCGCGACCAGATAGAGCGGTACAACCGACGCGTCCAGGAAATTGAAGATAAGCATCGAGCCTATCGTACCGGTGGCGTTCAGGCGCCTCATCTGAATCATCACTATCACGGACACCACGGACACTTGGGTGTCCCAGGGACCGGCGGGGGCGTTGATCCTCATCTTAACCATCGCCAAGATCCGGAGATGGAAGTTCGATTACGCGCTTATTAA
- Protein Sequence
- MDMVHLKSHLIMNGVCVTWRGWIDLERLDGVGCLEYDEERAAEEDALLRDQIERYNRRVQEIEDKHRAYRTGGVQAPHLNHHYHGHHGHLGVPGTGGGVDPHLNHRQDPEMEVRLRAY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00707604; iTF_01381091; iTF_00286954; iTF_00690853; iTF_00691692; iTF_01466863; iTF_01469418; iTF_01467710;
- 90% Identity
- iTF_00707604;
- 80% Identity
- -