Pcon016514.1
Basic Information
- Insect
- Plectrocnemia conspersa
- Gene Symbol
- -
- Assembly
- GCA_009617715.1
- Location
- VTFK01000080.1:490324-497663[+]
Transcription Factor Domain
- TF Family
- AF-4
- Domain
- AF-4 domain
- PFAM
- PF05110
- TF Group
- Unclassified Structure
- Description
- This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.1e-11 5.1e-07 29.7 0.4 7 110 57 164 54 192 0.75 2 2 0.00046 11 5.5 2.0 325 386 183 245 150 267 0.71
Sequence Information
- Coding Sequence
- ATGTCATATTTTCCTTTTAAAGTTTCTCTTAGTGAACAACGATTTTTGGTCAGATATTTGTGGTCCGAAGGAGTCACTCCCTACAATATTCACAAAAAGTTGATTGGTATCGCCGGAGACGAGTGTATTACTGAAAGTGATGTGTGCGATTGGATCGACAGcaTTGAGAATCTGCGCGAGAGGGACCGGCAAGCCCGCGCGCAGATGTCCTCGCAGGGGCAGAGTAGTATACAAGAAGCTGTGCCAATGTTTGAACCGCCGGTCAAGGTGAATCCGGGTGCAACGGATCGCGTCACCCAGGAGATTCGGAATAAACTCGGTGACTTTTACTCCGTGAAACATCTTCTCGATGATCCTAAATCATCGATCGGTGTGTATGGCGAGCCGCCGAGTCCCGCACCGGgTGGTGGACCGTCCCGTGGCTCCGAATTTAAGAAACCCCATTATGCATCATCACAGAATAACCGACCATATCAACGAACGCAATACTATAGTAACAATAAGTATCCAGATGGAATGTCTCTTGTCATGCCTAATAGGCTCCCgtctaataaaatctataatggGAAAACTCCACCGaaTATTAACGATCCTGGAGGAAATTACAGCGAAAAGACatcaattaattacattttaaagGAAATGAAATCACTTCCATGCCCTCCATTATCCGATATTGCAGCAACTCCTCGGAAAGAAGTTGAAACGTTCAGCTTCACCGCACTACCTCCCCAAAGGccGCCTTTGGAGCCATTGACGCCGATCGAGTCGAAACCGTGTCCGCAACAAAACAATCGTGAGTATATCGATTTGAGGCATTTTTCTCTAACGCAACAGGACCATGCGGAAGGCGCGCGCGATCGCATCCCCTTTCCGGAATTGTTGCACTGCATGGCGTACGTCACGTAG
- Protein Sequence
- MSYFPFKVSLSEQRFLVRYLWSEGVTPYNIHKKLIGIAGDECITESDVCDWIDSIENLRERDRQARAQMSSQGQSSIQEAVPMFEPPVKVNPGATDRVTQEIRNKLGDFYSVKHLLDDPKSSIGVYGEPPSPAPGGGPSRGSEFKKPHYASSQNNRPYQRTQYYSNNKYPDGMSLVMPNRLPSNKIYNGKTPPNINDPGGNYSEKTSINYILKEMKSLPCPPLSDIAATPRKEVETFSFTALPPQRPPLEPLTPIESKPCPQQNNREYIDLRHFSLTQQDHAEGARDRIPFPELLHCMAYVT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -