Pcon022002.1
Basic Information
- Insect
- Plectrocnemia conspersa
- Gene Symbol
- Rel
- Assembly
- GCA_009617715.1
- Location
- VTFK01000188.1:1027639-1031132[+]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.3 7.9e+03 -2.9 0.1 22 39 8 25 6 26 0.85 2 3 6.1e-33 2.1e-29 103.1 1.2 1 168 54 222 54 223 0.91 3 3 2.5 8.6e+03 -3.0 0.8 114 129 405 421 364 439 0.49
Sequence Information
- Coding Sequence
- ATGTCGACCCAATTTCACATTTCGGAAGGTTCTATCATGAACAACTACTCAACATCCGGTGAAATCACCTCGCCTTCGCCAATTAGCAACAGCTCGTCGTTAGGTTATATGATGTCTCCGGAACAGACAGTACCTCATTCTGacaataaaaaaatacatttaaaaatcttgGAACAGCCCATAGATAAATTTCGCTTTAGGTTTAAGAGCGAAATAATAAGATCACATGGATGTTTGATTGGTAGAACGAGCAAGAAGTCATTTCCAACGGTGGagttgaaaaattATCCGAGTGAAGCCATCGTAGCATGCACTTTGGTGCAAGTTGATGAAACCCACAGTGCACATCCGCACAGATTGGTCATTTACAAACAAAACGAAGAAACGGGCGATCCTCACATCAATATTAACCGAAAAAATGGACATACTGCaacGTTTGAAGATATGTTCATACTTTACACGAGTAAGAAGATGATCGTCAAAGAGTTATTAAGAagacataaaatcaattttccgCATATTGATTATAAAGAAAATGACCTGAAATTGGAGTACGAAAAGCAAGCgaatattataaacatgaattCGGTTTGTCTCAAATTCAGTGTCttcgacataaataaaaaagaaatttgCGAACCAATTTATTCAGAAGCGATTGACGATACAAaaattgttataaattcgAAGTTAGAAATAGTTTACGCGAGTAAAACGTCAGGATCGAGTCTTGGtggtgatttaatattattatttgtcgaAAAAGTCGACAAAAaaaatattaaagttaggTTTTTTGAAATGCAAAAGGGCGTTAGAGTTTGGGAGGAGTTTGCTTCGTTCTCAGAGTTGCACGTCCATTATCAATATGGAATTGCTTTCAAgaCACCGCCTTATAAAGATAATTATCCGACGCAGGATGTAAATGTGTTCATTGAATTGTTTCGTCCAAAAGATAACGCAGTATCTGAAAAAGTGCCGTATTGTTATAAAGTAAGTTATTTCAtagatttattcattataatattagttttgaaaaatcattttatttttaaaatgtatggaGCTGATGGTGATAAGGTTGAAGTAAATAAAACGGATATCGAAAACATTGAAGCCGATATAGAGAAGGAACTGAGGATTTTGATAAGACTAAGAACTGACGGATGGCGAGATAGGAGAAAGAACAAGAACTGCAACGAACGAAATAAGGTTCAGGTAAATAAAACGGATATCGAAAACATTGAAGCCGATATAGAAAAGGAACTGAAAGATCATGACAAATTGAATGACAGATTGAATGAAGAAACAAAAAGACTAAGATCACCGATAGTGACGGATGGCGAGATAGAAGATATCAACAGTCAAAAGAGATTATTATTGAACTTAGAACAAGAACTGCAACAAGAGATCGACGACAAACGTAATACGATTTTGACCAAAGAAACCAGCATTGAAAGAGAACTGTGCAGTTATCAGAAAACCCCTGTTAATTTAGAAAAGAAAGTTGCGGAATTGCAACAAATGAACGAGCAACTGTCCGAggagataaagaaaataaaaaaatcttttgagaaTGAACTAGCAAAATTGTGtaaagtatga
- Protein Sequence
- MSTQFHISEGSIMNNYSTSGEITSPSPISNSSSLGYMMSPEQTVPHSDNKKIHLKILEQPIDKFRFRFKSEIIRSHGCLIGRTSKKSFPTVELKNYPSEAIVACTLVQVDETHSAHPHRLVIYKQNEETGDPHININRKNGHTATFEDMFILYTSKKMIVKELLRRHKINFPHIDYKENDLKLEYEKQANIINMNSVCLKFSVFDINKKEICEPIYSEAIDDTKIVINSKLEIVYASKTSGSSLGGDLILLFVEKVDKKNIKVRFFEMQKGVRVWEEFASFSELHVHYQYGIAFKTPPYKDNYPTQDVNVFIELFRPKDNAVSEKVPYCYKVSYFIDLFIIILVLKNHFIFKMYGADGDKVEVNKTDIENIEADIEKELRILIRLRTDGWRDRRKNKNCNERNKVQVNKTDIENIEADIEKELKDHDKLNDRLNEETKRLRSPIVTDGEIEDINSQKRLLLNLEQELQQEIDDKRNTILTKETSIERELCSYQKTPVNLEKKVAELQQMNEQLSEEIKKIKKSFENELAKLCKV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -