Pcon020736.1
Basic Information
- Insect
- Plectrocnemia conspersa
- Gene Symbol
- Rel
- Assembly
- GCA_009617715.1
- Location
- VTFK01000367.1:200764-209984[+]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 4.1 1.4e+04 -3.8 0.1 22 39 9 26 7 27 0.85 2 3 1.6e-35 5.6e-32 111.4 0.6 1 168 66 235 66 236 0.90 3 3 3.4 1.2e+04 -3.5 0.1 82 112 708 739 701 756 0.61
Sequence Information
- Coding Sequence
- ATGTGGTCACAGCAACTTCACATTTCGGAAGGTTCTATCATGAACAACTACTCAACATCCGGTGAAATCACCTCGCCTTCGCCAATTAGCAACAGCACGTCGTTTGGTTATATGATGTCTCCGGAACAGACAGTACCTCAATTTGAAAACAATACCTTCTTTGGTGGACTGAATAATAacaataaacaaacacatttaaaaatcttGGAACAGCCTATAGATCAGTTTCGCTTTAGGTATAAGAGCGAAATGTCAGGAACACATGGATGTTTGATTGGTAGAACGAGCAAGAAGTCATTTCCAACGGTGGAGttgaaaaattATCCCGGAGAAGCCATCGTAGCATGCACTTTGGTGCAAATTGATCAAACCCACAGTGCACATCCGCACAGATTGGTAATTTGGAAACACAACGAAGAAATGGACGATccacacatatttaatattaaccgaAAAAATGGACATACTGCaacGTTTAAAGGTATGTCCATACTTTACACGAGTAAGAAAATGATCGTCGAAGAATtaataagaaaacataaaattaatttttcgcatattaattataaagaaaatgacctaaaattGGAGTATGAAAATGTGGCGAAGAATATAAACATGAATTCAGTCTGTCTGAAATTCAGTGTTTTCGATATGAATAATAGAGAGTTATGCGAGCCTATTTATTCAGAACCGATTGACAATACAAAATGTGCTGAAACGTGTCAGCTAAAAATAGTACACGCAAGTAGAATATCAGGATCGAGTCTCGGTGATGActccatattattatttgttgaaaaagtcAATAAAAaaaatattaaagttaggttttttgaaattcaaaaggGCGTTAGAGTTTGGGAGGAGTTTGCTTCGTTCTCAGAGTTGGACGTCCATCATCAATATGGAATTGCTTTCAAaacACCGCCTTATAAAGATAAGTATCCGACACAGGATGTAAATGTGTTCTTCGAATTGTTTCGCCCAAAAGATCATGCAGTATCCCAAAAAGTGCCATATTGTTATAAAgcTTCGATGAGACATTATAAAAGGCGTCGAACTGACGATGATTATGTTGAAGCAAACACCAGTAATGTAGTGATCCCAAGCATACCAGTTACTGTAGAAGATATGAATCAAGTagaaagcAATCAAATGGGGAGTGTTGTTACACCAGCTCAACCTCTGGAAACCTTTGATTATATTccaaatacacaaataaatttggAAAGCGCTCTTCCTGTGATTGATGACAACttattcaatttcaatttttgcaaCATGGAGGAGTTTTCCTGTatagatCCACATGAGATCAAccaaattataaatgatttatccAGTCCGGTAGAGAATAGTTCTTATCGACAGTGTTTGCAAATGGGCAACTGCTTGCAGGTAGATagcgtgaaaataaataaagagaagAAATTGAAGGAAAATGAATTAAAACCATTCACCGAGCTCTACAAGCGTTATTGCAAGAAAAGCATATCAGTTTTTAATCAAtttttagaTGAAATAAGACAGTGGCCAAAATTTTCACCggataacataaatatgttatgcAAACTCAACGAAGAAAAATTATCAGGAAATGATAATTTAATCCATTTATTGGTTTGGATGAATTATGAGAAGTTCTTGGTAAAAATGCtcgacattttaaataaaaattttccagATAAAAGAACTTTAATTTTGGATAAAGTAAATGATCGTGGATTATCTCCTTTGCTAATGGCAGTGGATTGTTCTCAATctaaatttgtcaaaattttattaaatggaggtTGTAATCCAAATGTGCGAGACATTGAAAATGGTAACACTTCATGCCACTTTGCTGTTCAGAATGATGATGAAAATTGTCTGATGCATTTGCTTCGTTACAATTCTCTAAATCTTCACTATGGATATTATGcagattataatacatataacgatgGGGGTTATACGCCTTTACATTTAGCTGTGAAGAAAGGATCGCTCCCTCTTTTGGTTTGTTTGATAAATGCGGGTGCTCCTTTGGATACAAGAACCAcagatggtaaaaatattttgcatttggCTGTAGAATATGGCCATCTGAATATAACAAAACATCTGGTGAAGCATTTAAAGatGGACCCTAATGAAGAGACATTCATAGGAAGCACGGCACTTCATATAGCTTGCGTTTCCAATGAAAATCAAATGAAGGAAATCGTCACTGTTTTGCTGgaaaacaatgcgGATcctctaaaaaatatgaaaaataattctagTCCTTGGGCCTATATTGTGAACAATGACAAATATGAGttaataaatataatgaaggaCTATATGCCTGAAGATATGATTAAATGCGTAGATGATGATTTGTCTTCTTTAGAGGATTCACTTTCGCAATCCTCCATTGAAGATGAAAACAAGCAATTTAGTGACGACTGCGTTAATGAGTTTATGGATTTTCGAACATCAGAATTGGTTGCAAAATCGTTAGACAAAACCGGTAAAtggaagaaaataattaatgtaatgaaAATCAGTGCCATTATGCCAATCTGTGAAATGGCATCGAGCCCTTCGATGATTGTGCTGAACGACATAGAGatggaAGAAAGATATTCCTTACAAGAGTTTCACGACATATTAGTGAATATCGACGCCGCTGAAGCagctttaataataagaaaaaaataccgccaccttaaatttattcaatga
- Protein Sequence
- MWSQQLHISEGSIMNNYSTSGEITSPSPISNSTSFGYMMSPEQTVPQFENNTFFGGLNNNNKQTHLKILEQPIDQFRFRYKSEMSGTHGCLIGRTSKKSFPTVELKNYPGEAIVACTLVQIDQTHSAHPHRLVIWKHNEEMDDPHIFNINRKNGHTATFKGMSILYTSKKMIVEELIRKHKINFSHINYKENDLKLEYENVAKNINMNSVCLKFSVFDMNNRELCEPIYSEPIDNTKCAETCQLKIVHASRISGSSLGDDSILLFVEKVNKKNIKVRFFEIQKGVRVWEEFASFSELDVHHQYGIAFKTPPYKDKYPTQDVNVFFELFRPKDHAVSQKVPYCYKASMRHYKRRRTDDDYVEANTSNVVIPSIPVTVEDMNQVESNQMGSVVTPAQPLETFDYIPNTQINLESALPVIDDNLFNFNFCNMEEFSCIDPHEINQIINDLSSPVENSSYRQCLQMGNCLQVDSVKINKEKKLKENELKPFTELYKRYCKKSISVFNQFLDEIRQWPKFSPDNINMLCKLNEEKLSGNDNLIHLLVWMNYEKFLVKMLDILNKNFPDKRTLILDKVNDRGLSPLLMAVDCSQSKFVKILLNGGCNPNVRDIENGNTSCHFAVQNDDENCLMHLLRYNSLNLHYGYYADYNTYNDGGYTPLHLAVKKGSLPLLVCLINAGAPLDTRTTDGKNILHLAVEYGHLNITKHLVKHLKMDPNEETFIGSTALHIACVSNENQMKEIVTVLLENNADPLKNMKNNSSPWAYIVNNDKYELINIMKDYMPEDMIKCVDDDLSSLEDSLSQSSIEDENKQFSDDCVNEFMDFRTSELVAKSLDKTGKWKKIINVMKISAIMPICEMASSPSMIVLNDIEMEERYSLQEFHDILVNIDAAEAALIIRKKYRHLKFIQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -