Parg022052.1
Basic Information
- Insect
- Plebejus argus
- Gene Symbol
- -
- Assembly
- GCA_905404155.1
- Location
- FR989938.1:14733745-14739152[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 22 0.012 0.89 10.6 0.6 3 23 67 88 66 88 0.90 2 22 0.32 24 6.1 0.2 1 21 456 476 456 477 0.96 3 22 4.4 3.3e+02 2.5 0.3 1 22 519 540 519 542 0.82 4 22 0.037 2.8 9.0 0.8 3 21 553 571 551 572 0.94 5 22 0.36 27 5.9 0.0 3 23 581 602 579 602 0.89 6 22 0.027 2 9.4 0.1 3 23 622 643 620 643 0.96 7 22 0.0049 0.37 11.7 2.1 1 23 649 672 649 672 0.92 8 22 0.058 4.3 8.4 0.0 1 23 696 719 696 719 0.90 9 22 0.012 0.92 10.5 3.4 1 23 724 746 724 746 0.97 10 22 0.0069 0.52 11.3 0.0 1 23 752 775 752 775 0.96 11 22 0.00057 0.043 14.7 2.0 1 23 789 811 789 811 0.98 12 22 0.00012 0.0087 16.9 1.8 1 23 855 878 855 878 0.97 13 22 0.00021 0.016 16.1 1.2 1 23 945 968 945 968 0.95 14 22 0.0029 0.22 12.5 1.4 2 23 995 1017 994 1017 0.95 15 22 0.3 23 6.1 0.1 2 23 1023 1045 1022 1045 0.93 16 22 0.0031 0.23 12.4 0.4 1 21 1084 1104 1084 1105 0.94 17 22 0.0034 0.26 12.2 0.1 1 23 1116 1138 1116 1138 0.93 18 22 7.3e-05 0.0055 17.5 0.3 2 23 1226 1248 1226 1248 0.93 19 22 1.2e-07 8.7e-06 26.3 1.0 3 23 1255 1275 1254 1275 0.98 20 22 0.18 13 6.8 0.0 1 23 1323 1345 1323 1345 0.97 21 22 0.016 1.2 10.1 0.6 1 23 1351 1374 1351 1374 0.95 22 22 0.00012 0.0092 16.8 0.8 1 23 1382 1405 1382 1405 0.97
Sequence Information
- Coding Sequence
- ATGGGTGTGGACAGCGATAAGGACGATTACGAGGACTGCGAGGAGCAGGACGAGCCCGCTGATGATGAGGAGGAGGAGAAGGGGCGGAAACCGCACTCCGATATACCCAACATGCCCGAAGTCTCCATCACTGTCATGCGACCCACGGGGGAGACGCTGCACGCGAGGCAGGGGATCCAGCAGCTCGCCTCCAAGGACTGCCTCGTCTGCGGCCGCAGCTACAGGTACTCCCACAACGCCCGTCGGCACGAGCTTGGAGCGCACAATTTCGACCGATACACCAACAACCACCTCGCCAGGAAGTCCACCATGCAGCCCAAACTCCGACCCAACCCCTTCAACCCGAAGGCGCGACTCATGCCCAACCCCATCAGCCACAAGATTCAGTACATGAATATGAGCATGGGCAAACCCCTGCAGAGAAAGATTGTGCCCCAGAAAATGGTCGCCTACCCGAAAGCGATCCCGATAAAGAATGCCAAATCGAACCAAACCAATCTGCCGTACCCGCTCCGCATCAAGGCGCTGAAGGACCTCCAGATCAAGAAGAAGGAGCCCCAGATCCTGAAGACGCTTCTGACGTCGAAACCGGAGGTTCTGGTGTCGGAACCGGAAATAATGAATTCCGGCCCCGAGAGTCCGGAGACGCTGATATCCGAGCCGGAGATAGCGTCGTTCGCGGTCGAGACGATCCTGTCCGAGCCGGACGGGGACGCCCAGCGGGACGACGACTATGACGGCGACGAACAAAGCAAGCGCGGCCACAACTACGACACCGTGGACATGGACTCCGAGAACGAGATAGAAATAGCGCGGCAGCGCGATGTCACCCACGACGGGGAGCGGGAACAGGAGGACGGCGAGAAGGAGTACAATGATAACGACGATTCCGACAAAAACAGCGCGGGCGACAACGCGGCCGAGACGGGTGAGACTAAGCACGACCAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACCGTCGACCCCACCGAGGCCGCCGACCTCGACACCACGCCCAAAGTGCTCGACCCCGACAAGGTCTACGTCACCAAGACTCAGAGAGATTTTATAGTCAAGTATCGCGATATAATTCAGCAGATCAACACCATGACCTGCCTCTGCTGCAACAGGGAGCACCCCCGGCGGAAGGCGGTCATCCAGCACCTCCAGAAGAACGGCCACAAGGTCCCCAAGCACACCTGCTACAACTGCGTCGTCACCTTCGGCCACATCGGCGCCCTCCTGAGCCACATGCGGGCCAACCGCTGCACCGACTTATGGAAGATCATCTACGACGAGAACGGCATAACCGACGACCGGGTGATCGAGGACGAGCCGAAGGACACCAAGGTCGCGTACAAGGACATCTTCAACGCGCGGTCGTACGCCTGCAAGCTCTGCCCGGCCAAGTTCCAGCTGAAGCAGTTCATCATGAAGCACGTGCTGGACGTGCACGAGGACGGGCAGTCGCTCGTGCAGCTGGCGTGCGTGCACTGCCGTTCGCGGTTTAAGGACAAGGCGCTGTGGAAGAAGCACATCCGCAACGGCGAGTGCACCGTGTACATCGCGTGCGACCTGTGCACCGAGACCTTCATCACCGTGCAGGAGTTCAACGACCACGCGCTCGCTGTGCACGCCGGCCATTTCGACCCCGACAGCCAGAACAAGTGCGTCGACGGCCGCCCCACCGACTGCCCCATCTGCGGGAAGAAGAACAGCGGCTACCCCAACCTCGTGAAGCACCTCAAGATCATCCACGACGAGGAGCGGCCGCACTACTGCCAGCACTGCGACTCCAAGTTCAAGGAGGCGAGCGACCTCAACGAGCATATCTACGCGGAGCACTCGGACCGCGCCGTCCGCGGCGCCGAGCCCGACACGGCCGTCGTCAAGGAGGAGGCGGAGGAGTACCACTACTCGTGCACCGAGTGCGACGCGATATTCGAGACCGTCGATGCCTGGACCGACCACCAGGTCGCTGAGCACGACCAGATCGCGCACCACTGCGACCAGTGCGAGAAGAAGTTCCTCCGGCCGTCCGAGCTCGCCGAGCACAAGAACACGCACCTGCGCGTCAAATTCTACCCGTGTTCGATCTGCGCCAACTCCTACAGTACGGCCTCCAAGTTGGCCGAGCACGCGCAGCGGGCGCACCCCGGCGCCGCCCCCGCCTCCGCCCCCGGCGAGAACGTGTTCCACTGCGACATCTGCGTGCGGGGTTTCAAGAGCCGCCAGGCCTACTCCAACCACATGCGCATCCACTCGAAGCTCCCCCAGACGAACAGGCGCGCGGACCGGCCCAGCTTCGCGCCGCAGATCGTCGGGAAGCCGATCCTCCAGTACCCGCTGATGCAGGGGTTCCGGTCGAGCCTGCCCGTCCCTAACGCGCCCTATTCGTGCGACATCTGCGGAAAGGGCTTTATGCACAAGAAGAACATCTGGAAGCACAAGAAGGTGCTGCACGCTGACATCGTCGACCGCAACGACAGCGAGGAGAACACCATGCACGCGTCCACGGAGGAGGACGAGCGCAATGGGGATGAGAACGGCGCGCTCTCGACGCCGCAATTCGACAGCTTCGACTTCGGCAGCCCGCCCGCCGCCGCCCCGCCCCGCCCCGCCGCGCCCCGCGCCGCCCCGCCGCCGCCCGACGCCATGCAGTTCGCATGCGATCTCTGCTCCAAGCGGTTCCCCCAGCGGACGAGCCTTTGGAAGCACAAGCGCGCGAAGCACGGCATCATCAACGCCGCCGCCATCGGCACCGCCGACGTCCAGCCCGCCGGCGGCGAGGGCGGCGCCGGCGGCCGCTCCAGCTGCACCATCTGCCGGATCACTTTCGCCGACAAGAAGTCCTACTACCGGCACAGGAAGAACGTGCACAAGTCCACCGTGCAGATGTGCAAGCTGTGCGGGCGGGCGCTCAACTCGACGCTCGAGCTGTACGAGCACCTGAAGGCGGCGCACTCTCGCGAGCTGCTCGGCCACACCGCGCCGCCGTCCGCCGCCGAGCGCGACTACGACGAGCCGGAGGACGAGGGGGAGCCGCCGCGTGCCGACCCCGCCGAGTACCAGGCGCACTACACCTGCGAAACCTGCGGCAAGCGCTTCGTCGGCCTGCTCGCGCTACAGAACCACCGGTGCGTCTCGGCCGCGCTGCTGCAGCAGCCGCAGACGTTCGACTGCGAGATCTGCCAGAAGAGCTACGTCTCCATCGCGGCGCTCAAGAGCCACCGCGGCTGGCACCTGCGCTCGCCGGACGGCAAGGCGGCCGCCACCAACTCCGGCCTATGGATGCCGCACAACAAGGTCACCAGCAAGGTGAGCAAGTTCGAGGTGGTGGATGGGGGCGCGCGGGCGGCGGGCTCGCCGCCTGGCCCCGCCGCGCTCGCCAAGCGCCGCCTGCCGCCCGAGGTTGAGGTCACCGTCGTCAACCCCAACAAGCGCATGCGGCCGGACGACGCCGCCGAGCCGCCTGCGCCCGCCGCGTCCACCGGCGACGACCGCTACTGCACCATCTGCGACAAGGAGTTCACGAAGCGCGCCGCGTACCAGCGGCACATGGACGAGGTGCACCAGCCCAACTCGGTGTTCTGCCCCGTGTGCGACCGCAGCTTCACGCGCAAGTCGACGCTCATCGTGCACATGAGGAAGCACTACGAGACGGAGGAGGGCGGCGTGGCGGGCGGCGGGGGGGAGGAGGAGGACGACGAGGCGGAGCTGGAGGCGCACCGCGAGCACGACGACGACTCCGCCGACTCAGGGGAGGAGGGGGGACGCGCGCCGCCGCCGGGCGAGTTCACGTGCGCGCAGTGCGGCGACGGCGTGGCCAGCCCGCGCGACCTGATCGCGCACCGCGCCATGCACGCGACGCCCACCAAGTTCTTCTGCAACATCTGCAAGGTATACTTCGCGCGCGCGCTCGACCTGTCCACGCACACGCGCGCGCGCCACGCCGACAACGACAAGGTGTTTTTCCCCTGCGCGATGTGCGACCGCTTCTACATGAACAAGAAGAGCCTGCAGCGGCACATCGAGACGTCGCACTGA
- Protein Sequence
- MGVDSDKDDYEDCEEQDEPADDEEEEKGRKPHSDIPNMPEVSITVMRPTGETLHARQGIQQLASKDCLVCGRSYRYSHNARRHELGAHNFDRYTNNHLARKSTMQPKLRPNPFNPKARLMPNPISHKIQYMNMSMGKPLQRKIVPQKMVAYPKAIPIKNAKSNQTNLPYPLRIKALKDLQIKKKEPQILKTLLTSKPEVLVSEPEIMNSGPESPETLISEPEIASFAVETILSEPDGDAQRDDDYDGDEQSKRGHNYDTVDMDSENEIEIARQRDVTHDGEREQEDGEKEYNDNDDSDKNSAGDNAAETGETKHDQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVDPTEAADLDTTPKVLDPDKVYVTKTQRDFIVKYRDIIQQINTMTCLCCNREHPRRKAVIQHLQKNGHKVPKHTCYNCVVTFGHIGALLSHMRANRCTDLWKIIYDENGITDDRVIEDEPKDTKVAYKDIFNARSYACKLCPAKFQLKQFIMKHVLDVHEDGQSLVQLACVHCRSRFKDKALWKKHIRNGECTVYIACDLCTETFITVQEFNDHALAVHAGHFDPDSQNKCVDGRPTDCPICGKKNSGYPNLVKHLKIIHDEERPHYCQHCDSKFKEASDLNEHIYAEHSDRAVRGAEPDTAVVKEEAEEYHYSCTECDAIFETVDAWTDHQVAEHDQIAHHCDQCEKKFLRPSELAEHKNTHLRVKFYPCSICANSYSTASKLAEHAQRAHPGAAPASAPGENVFHCDICVRGFKSRQAYSNHMRIHSKLPQTNRRADRPSFAPQIVGKPILQYPLMQGFRSSLPVPNAPYSCDICGKGFMHKKNIWKHKKVLHADIVDRNDSEENTMHASTEEDERNGDENGALSTPQFDSFDFGSPPAAAPPRPAAPRAAPPPPDAMQFACDLCSKRFPQRTSLWKHKRAKHGIINAAAIGTADVQPAGGEGGAGGRSSCTICRITFADKKSYYRHRKNVHKSTVQMCKLCGRALNSTLELYEHLKAAHSRELLGHTAPPSAAERDYDEPEDEGEPPRADPAEYQAHYTCETCGKRFVGLLALQNHRCVSAALLQQPQTFDCEICQKSYVSIAALKSHRGWHLRSPDGKAAATNSGLWMPHNKVTSKVSKFEVVDGGARAAGSPPGPAALAKRRLPPEVEVTVVNPNKRMRPDDAAEPPAPAASTGDDRYCTICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDRSFTRKSTLIVHMRKHYETEEGGVAGGGGEEEDDEAELEAHREHDDDSADSGEEGGRAPPPGEFTCAQCGDGVASPRDLIAHRAMHATPTKFFCNICKVYFARALDLSTHTRARHADNDKVFFPCAMCDRFYMNKKSLQRHIETSH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00164581;
- 90% Identity
- iTF_00164581;
- 80% Identity
- -