Aage019434.1
Basic Information
- Insect
- Aricia agestis
- Gene Symbol
- -
- Assembly
- GCA_905147365.1
- Location
- LR990267.1:16034747-16039298[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 22 0.013 0.91 10.5 0.6 3 23 87 108 86 108 0.90 2 22 0.35 25 6.0 0.2 1 21 474 494 474 495 0.96 3 22 4.8 3.4e+02 2.4 0.3 1 22 537 558 537 560 0.82 4 22 0.04 2.8 9.0 0.8 3 21 571 589 569 590 0.94 5 22 0.31 22 6.2 0.0 3 23 599 620 597 620 0.89 6 22 0.085 6 8.0 0.1 3 23 640 661 638 661 0.96 7 22 0.0032 0.22 12.5 3.0 1 23 667 690 667 690 0.95 8 22 0.063 4.4 8.4 0.0 1 23 714 737 714 737 0.90 9 22 0.013 0.94 10.5 3.4 1 23 742 764 742 764 0.97 10 22 0.064 4.5 8.3 0.0 1 23 770 793 770 793 0.94 11 22 0.0011 0.078 13.9 1.9 1 23 807 829 807 829 0.98 12 22 0.00013 0.0089 16.9 1.8 1 23 874 897 874 897 0.97 13 22 0.00023 0.016 16.0 1.2 1 23 964 987 964 987 0.95 14 22 0.0031 0.22 12.5 1.4 2 23 1014 1036 1013 1036 0.95 15 22 0.33 23 6.1 0.1 2 23 1042 1064 1041 1064 0.93 16 22 0.0035 0.24 12.3 0.5 1 21 1103 1123 1103 1124 0.94 17 22 0.0038 0.26 12.2 0.1 1 23 1134 1156 1134 1156 0.93 18 22 6.3e-05 0.0044 17.8 0.3 2 23 1244 1266 1244 1266 0.93 19 22 1.3e-07 8.9e-06 26.3 1.0 3 23 1273 1293 1272 1293 0.98 20 22 0.19 14 6.8 0.0 1 23 1339 1361 1339 1361 0.97 21 22 0.018 1.2 10.1 0.6 1 23 1367 1390 1367 1390 0.95 22 22 0.00013 0.0094 16.8 0.8 1 23 1398 1421 1398 1421 0.97
Sequence Information
- Coding Sequence
- ATGTGGTCGGTATTCGGTATCACACAAGTGGTTGAGACAACGACTGCAAATGTGGGTGTGGACAGCGATAAGGACGATTACGAGGACGGCGAGGACCAAGACGAGCCCGCTGATGATGATCATGACGAGGAGGAGGCGAAGGAGCGGAAACCGTACTCCGAAATACCCAACATGCCCGAAGTCTCCATCACCGTCATGCGACCCACGGGGGAGACGCTGCACGCGAGGCAGGGAATCCAGCAGCTCGCCTCCAAGGACTGCCTCGTCTGTGGCCGCAGCTACAGGTACTCCCACAACGCCCGCCGGCACGAGCTCGGAGCCCACAACTTCGACCGATACACCAACAACCACCTCGCCAGGAAGTCCACCATGCAGCCCAAGCTCCGACCCAACCCCTTCAACCCCAAGGCGCGACTCATGCCCAACCCTATCAGCCACAAAATCCAGTACATGAACATGAGCATGGGCAAGCCCCTGCAGAAGAAGTTCATGCCCCAAAAAATGGTCGCCTGCCCGAAACCGATCCCGATAAAGAACGCCAAATCGAACCAAACTAATCTGCCGTACCCTCTCCGCATCAAGGCGCTGAAGGACCTCCAGATTAAGAAGAAGGAACCTCAAATCCTGAAGACGCTTCTGACGTCGAAACCGGAGGTTTTGGTGTCGGAACCGGAAATAATGAATTCCGGCCCCGAGAGTCCGGAGACGCTGATATCCGAGCCAGAGATAGCGTCTTTTGCGGTCGAGACGATCCTGTCCGAGCCGGACGGGGACGCCCAGCAGAACGACGACTACGACGGCGAGGAACAGAACAAGCGCGGCCATAACTACGACACCGTGGACATGGACTCCGAGAACGAGATAGAAATAGCGCGGCAGCGGGCCGACGTCGACTACGACGAGGAGCACAAGGAGGAGGGCGACAAGGAGTTCAATGAAAATGACGATTCCGACAAAAACAGCGCGGGTGACAACGCGGCCGATACGACCGACACTAAACACGAGGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACCGCCGCCCCCAAAGTGCTCGACCCTGATAAGGTTTACGTGACGAAAACCCAGAGAGATTTTATAGTCAAATATCGCGATATAATTCAGCAGATCAACACGATGACCTGCCTGTGCTGCAACAGGCAGCACCCCCGGCGGAAGGCGGTCATCCAGCACCTCCAGAAGAACGGCCACAAGGTCCCCAAGCACACCTGCTACAACTGCGTCGTCACGTTCGGCCACATCGGCGCCCTGCTGAGCCACATGCGGGCCAACTGCTGCACCGACCTGTGGAAGATCATCTACGACGAGAACGGCATAACCGACGACCGGGTGATCGAGGACGAGCCGAAGGACAACAAGGTCGCGTACAAGGACATCTTCAACGCGAGGTCGTACGCCTGCAAGCTCTGCCCGGCCAAGTTCCAGCTGAAGCAGTTCATCATGAAGCACGTCCTGGACGTCCACGAGGATGGCCAGTCGCGCGTGCAGCTGGCGTGCGTGCACTGTCGTTCGAGGTTCAAGGACAAGGCGCTGTGGAAGAAGCACATCCGGAACGGCGAGTGCACGGTGTACATCGCGTGCGACTTGTGCACCGAGACCTTCATCACCATGCAGGAGTTCAACGACCACGCGCTCGCCGTACACGCCGGCCAATTCGACCCCGACAGCCAGAACAAGTGCGTCGACGGCCGCCCCACCGACTGCCCCCTATGCGGGAAGAAGAACAGCGGCTACCCCAACCTCGTGAAGCACCTGAAGATCATCCACGACGAGGAGCGGCCGCACTACTGCCAGCACTGCGACTCCAAGTTCAAGGAAGCCGGCGACCTCAACAAGCACATCTACATGGAGCACTCCGACCGCTCTATCAGGAGCGCCGAGCCCGACATGTCCGTTGTCAAGGAGGAGGCGGAGGAGTACCACTACTCGTGCACCGAGTGCGACGCGATATTCGAGACCGTGGACGCTTGGACCGACCACCAGGTTGCCGAGCACGACCAGATCGCGCACCACTGCGACCAGTGCGAGAAGAAGTTCCTCCGGCCGTCCGAACTCGCCGAGCACAAGAACACGCACCTGCGCGTCAAGTTTTACCCGTGCTCGATCTGCGCCAACTCGTACAGCACGGCTGCCAAGCTGGCCGAGCATGCGCAGCAGGCGCACCCCGGCGCCGCCCCCGCCACTGCCCCCGGCGAGAACGTCTTCCACTGCGACGTCTGCGTGCGTGGCTTCAAGAGCCGCCAGGCCTACTCCAACCACATGCGCATCCACTCAAAGCTCCCCCAGACGAATAGGCGCGCGGACCGGCGGAGCTTCGCCCCGCACATCGTCGGCAAGCCGATCCTCCAGTACCCGCTGATGCAGCAGGGGTTCAGGTCGAACCTCTCCGTCCCCAATGCGCCCTACTCGTGCGACATCTGCGGCAAGGGCTTCATGCATAAGAAAAACATCTGGAAGCACAAGAAGGTGCTGCACGCCGACGTCGTCGCCGACCGCAACGACAGCGAGGAGAACACCATGCACGCGTCCACCGAGGAGGACGAGTACAACGGGGACGAGAACGGCGCGCTCTCGACGCCGCAGTTCGACAGCTTCGACTTCGGCAGCCCGCCCGCCGCCGCTCCGCCCCGCCCCGCCGCGCCCCGCGCCGCCCCGCCGCCCGACGCCATGCAGTTCGCCTGCGACCTGTGCTCCAAGCGGTTCCCCCAGCGCACGAGCCTGTGGAAGCACAAGCGCGCGAAGCATGGCATCATCAACGCCTCCGCCATCGGCACCGCCGATGTCCAGCCCGTCGGCGGCGAGGGCGGCGCCGGCGGCCGCTCCAGCTGCACCATCTGCCGGATCACCTTCGCCGATAAGAAGTCCTACTACCGGCACAGGAAGAACGTGCACAAGTCCACCGTGCAGATGTGCAAGCTGTGCGGGCGGGCGCTCAACTCGACGCTCGAGCTGTACGAGCACCTCAAGGCGGCGCACTCTCGGGAGCTGCTGGGCGACACCGCCCCGCCGCCGGCCGCCGAGCGCGAGGACGAGGAGGCGGAGGACGAGCGGGAGCCCGTGCGCGCCGGCCCCGCCGACTACCAGGCCCACTACACCTGCGACACCTGCGGCAAGCGCTTCGTCGGCCTGCTCGCGCTGCAGAACCACCGGTGCGTCTCGGCCGTGCAGCAGCAGCCGCAGACGTTCGACTGCGAGATCTGCCAGAAGAGCTACGTCTCCATCGCGGCGCTCAAGAGCCACCGCGGCTGGCACCTGCGCTCGCCGGATGGCAAGGCGGCCGCCACAAACTCCGGCCTATGGATGCCGCACAACAAGGTCACCAGCAAGGTGAGCAAGTTCGAGGTGGTGGACCCGGGGGTGCGGGCGGCGGGCTCGCCGGCCGGCCCCGCCGCGTTCGCCAAGCGTCGCCTGCCGCCCGAGGTCGAGGTCACCGTCGTCAACCCTAACAAGCGCATGCGGCCCGACGACGCCGCCGAGGCCCCCGCGCCCGGCGCTCCCGGCGGCGACGACCGCTACTGCAACATCTGCGACAAGGAATTCACCAAGCGCGCCGCGTACCAGCGGCACATGGACGAGGTGCACCAGCCCAACTCGGTGTTCTGTCCCGTGTGCGACCGCAGCTTCACACGCAAGTCGACGCTCATCGTGCACATGAGGAAGCACTACGAGACGGAGGAGGGCGGCGCGGCGGGCGGCGGGGAGGACGACGACGAGGCGGAGCCGGAGGCGCATCGCGAGCACGACGACGAGTCCGGGGACTCGGGGGAGGAGGGCGGGCGCGCGATGCCGCCGGGCGAGTTCACGTGCGCGCAGTGCGGCGACGGCGTGGCCAGCCCGCGCGACCTCATCGCGCACCGCGCCATGCACGCGACGCCCACCAAGTTCTTCTGCAACATCTGCAAGGTGTACTTCGCGCGGGCGTTGGACCTGTCCACGCACACGCGCGCGCGCCACGCCGACAACGACAAGGTGTTCTTCCCGTGCGCGATGTGCGACCGCTTCTACATGAACAAGAAGAGCCTGCAGCGGCACATCGAGACCTCGCACTGA
- Protein Sequence
- MWSVFGITQVVETTTANVGVDSDKDDYEDGEDQDEPADDDHDEEEAKERKPYSEIPNMPEVSITVMRPTGETLHARQGIQQLASKDCLVCGRSYRYSHNARRHELGAHNFDRYTNNHLARKSTMQPKLRPNPFNPKARLMPNPISHKIQYMNMSMGKPLQKKFMPQKMVACPKPIPIKNAKSNQTNLPYPLRIKALKDLQIKKKEPQILKTLLTSKPEVLVSEPEIMNSGPESPETLISEPEIASFAVETILSEPDGDAQQNDDYDGEEQNKRGHNYDTVDMDSENEIEIARQRADVDYDEEHKEEGDKEFNENDDSDKNSAGDNAADTTDTKHEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAAPKVLDPDKVYVTKTQRDFIVKYRDIIQQINTMTCLCCNRQHPRRKAVIQHLQKNGHKVPKHTCYNCVVTFGHIGALLSHMRANCCTDLWKIIYDENGITDDRVIEDEPKDNKVAYKDIFNARSYACKLCPAKFQLKQFIMKHVLDVHEDGQSRVQLACVHCRSRFKDKALWKKHIRNGECTVYIACDLCTETFITMQEFNDHALAVHAGQFDPDSQNKCVDGRPTDCPLCGKKNSGYPNLVKHLKIIHDEERPHYCQHCDSKFKEAGDLNKHIYMEHSDRSIRSAEPDMSVVKEEAEEYHYSCTECDAIFETVDAWTDHQVAEHDQIAHHCDQCEKKFLRPSELAEHKNTHLRVKFYPCSICANSYSTAAKLAEHAQQAHPGAAPATAPGENVFHCDVCVRGFKSRQAYSNHMRIHSKLPQTNRRADRRSFAPHIVGKPILQYPLMQQGFRSNLSVPNAPYSCDICGKGFMHKKNIWKHKKVLHADVVADRNDSEENTMHASTEEDEYNGDENGALSTPQFDSFDFGSPPAAAPPRPAAPRAAPPPDAMQFACDLCSKRFPQRTSLWKHKRAKHGIINASAIGTADVQPVGGEGGAGGRSSCTICRITFADKKSYYRHRKNVHKSTVQMCKLCGRALNSTLELYEHLKAAHSRELLGDTAPPPAAEREDEEAEDEREPVRAGPADYQAHYTCDTCGKRFVGLLALQNHRCVSAVQQQPQTFDCEICQKSYVSIAALKSHRGWHLRSPDGKAAATNSGLWMPHNKVTSKVSKFEVVDPGVRAAGSPAGPAAFAKRRLPPEVEVTVVNPNKRMRPDDAAEAPAPGAPGGDDRYCNICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDRSFTRKSTLIVHMRKHYETEEGGAAGGGEDDDEAEPEAHREHDDESGDSGEEGGRAMPPGEFTCAQCGDGVASPRDLIAHRAMHATPTKFFCNICKVYFARALDLSTHTRARHADNDKVFFPCAMCDRFYMNKKSLQRHIETSH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01217681;
- 90% Identity
- iTF_01217681;
- 80% Identity
- -