Basic Information

Transcription Factor Domain

TF Family: DM
Domain: DM domain
PFAM: PF00751
TF Group: Zinc-Coordinating Group
Description: The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 7.1e-25 4.1e-21 74.5 10.5 1 47 10 56 10 56 0.98

2 3 0.98 5.6e+03 -2.7 0.3 28 35 217 224 216 228 0.77

3 3 0.059 3.4e+02 1.2 1.8 28 35 317 324 316 327 0.85

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	7.1e-25	4.1e-21	74.5	10.5	1	47	10	56	10	56	0.98
2	3	0.98	5.6e+03	-2.7	0.3	28	35	217	224	216	228	0.77
3	3	0.059	3.4e+02	1.2	1.8	28	35	317	324	316	327	0.85

Coding Sequence: ATGCTAACCACCAAGAATCGTTCAGCCCGTATTCCAAAATGTGCCAGATGCCGAAATCATGGAATGATATCGACATTACGTGGACACAAGAAGCAGTGCATTTACAAGAATTGCAGTTGTGCCAAATGCGGCCTAATTAAGGAAAGACAACGTATCATGGCAGCCCAAGTTGCATTAAAACGACAACAAGCCGCCGAAGATGCAATCGCTCTTCATTTGGCCGCAGCTGAAAATGGTACAACATACGAATACCTGCCACCAGGACGAATTTATGGAATGCAAGTTACATCACCGGAAACTGAAGATATTTCTATGACTTCAGCACCTGTTATTGCCGCTGTTAAATCGCCATCAACATTATCAGCAGGAACAATAACGCAACATCGGCTTGAAAGTGATACTTCAGGAAATGGTTCTGCGACTAAAGAAGATGTTGTTATTAGTCCTGGTTCGATTGATATGTTAAGTAAATTATTTCCGAATAAGAAACGAGCTGTATTGGAATTGGTACTTAGAAGATGCAATCACGATCTTCTTAAAGCCATTGAACATTTCaacattcataataaatcGACACCACCACCATCTTCATCTACCACCAATGAAAACGACACAGATTCAAATGGCAGCGGCAGTATCAAAGATGTCACCTGTTCATCTTCTTCTTGTCATGCTTCAACATCAGCTTTTAAACCTGTCGTAGCTGGTtctaaaacaattaatttcgGATCAACAACCAAACTTGgactatcatcatcatcatcatcatcaacaacaacaacaacaacatcagCATATTCGGGAATACATGCTGCTGCCGcagccgccgccgccgccgccgctgCTGCAGCTGCCGTTCCAATGATTTCGAGTGAAGTGTTTAGTTTCTATCcattttttccaatatttccGAAACCGGTGATTCGTAATCCAGTTTATGTACCTGGATATTGTGATTGTGAACAATGCAAACATAGTGTttatggtggtggtggtggtgtagGAGATAATAGACAGTAA
Protein Sequence: MLTTKNRSARIPKCARCRNHGMISTLRGHKKQCIYKNCSCAKCGLIKERQRIMAAQVALKRQQAAEDAIALHLAAAENGTTYEYLPPGRIYGMQVTSPETEDISMTSAPVIAAVKSPSTLSAGTITQHRLESDTSGNGSATKEDVVISPGSIDMLSKLFPNKKRAVLELVLRRCNHDLLKAIEHFNIHNKSTPPPSSSTTNENDTDSNGSGSIKDVTCSSSSCHASTSAFKPVVAGSKTINFGSTTKLGLSSSSSSSTTTTTTSAYSGIHAAAAAAAAAAAAAAAVPMISSEVFSFYPFFPIFPKPVIRNPVYVPGYCDCEQCKHSVYGGGGGVGDNRQ

Sequence clustering based on sequence similarity using MMseqs2