Pcyl007540.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Platypus cylindrus
Gene Symbol
TSC22D1
Assembly
GCA_949748235.1
Location
OX456489.1:10149692-10153319[-]

Transcription Factor Domain

TF Family
TSC22
Domain
TSC22 domain
PFAM
PF01166
TF Group
Basic Domians group
Description
These proteins are highly similar in a region of about 50 residues that include a conserved leucine-zipper domain most probably involved in homo- or hetero-dimerisation. Drosophila protein bunched [1] (gene bun) (also known as shortsighted), a probable transcription factor required for peripheral nervous system morphogenesis, eye development and oogenesis.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1 1.7e+04 -7.3 5.6 45 52 456 463 442 470 0.56
2 2 3.8e-28 6.5e-24 83.8 1.8 1 50 591 640 591 646 0.95

Sequence Information

Coding Sequence
atgGATCCAAAAAGGGAGGAAAAGATTCACCGCTACATTCCTAAAGAAAGTATTAATTATGATGATCAAACTCCAGACTACATGAATATTATTGGTCAAGCCCCGACCACGGCGGCAAATGCAGTTGCTGCTGAACAAGTTGACAAACATCAAGACAGTGTCGTCAATGTTGAACCAAATCCACATCCAGTTCGTATATCAGAAGATGTTCAGcagcaaacaaaaaataatgatgaacttgctactgctgctgttgctggtGCTGCTACCACTAgtaatgctgctgctgctaatGTGATACCCACAAGTCCTCAATATGGTGTAGCTATAATTCCAAATAATGCAAATCTTACAACCGCACCGGTTAATGTGAATGGTGGTGAATCGACAACAAATTTAACAACGGAATCATTATTATATGCAGCATCATCGAAGCCAGGCGAAGATATTAAAGATATACATACGACGCCAAGTCGAAATGATAGATTTAAAGTGGTTAAAATAGCTAGTCTGGAGCCATTTCGGCGTGGTCGTTGGAAATGTATGGATTATGTTGATGAGGCGCCACCCCCAAATGCCGCCAATTTAAATAAAGCCGTTCAATCAATTGGAACGAGTACAGTTGCGGGCGGTGTTTTCCTACAAACACAAAGTTTGCCACAGCAACAGATCCAACAAATGCTTCTGCAAGGTGGCTTCACTAATGGAACACAGTTCTTTCCTAGTGTACCGGCCCAATTAATATCTCAAGGTCAATATTTTTATCCTCAATTTACCAATATGCAAAATCAGACTGTTCCTCAACCATCTGCCTCCAGTATGCCTGCacagtttttaaataatcaaCCGTATATTTCGGCTGCTGGTGTTATTACAAATCCTGGGGGTGGCGGAGGCGGTAATGGAGCTCCTGCTGCTGCAGCTACTGTTGGTGGTTTTACAATACCACAAGGCTatcaaaatattcaatatGTTCCAATACAGGCACCAAATAGCGCTTTTGTACCGACAAGTCAAGGCGTTCATTTAGCAGCGAATTTCCAACAAAGTCAAACTTACGCCGGCCAGCCGACCAGTGTCTCTCAAGCCAATGTTAATCAAAATGCAACAGTTAATGGGCATGTTTATCCACCAGAATCTCAAACACAAATATCAAacaatagcaataataataacaataataacaatatgcCGAATCAGCAAGCGAAAAATATCATTATAAATACACAGCCCATTGTTAATAATGCACAACAGCCCATTGTGCAATCAAATCAATTGCCACCACAAATAACAGGATTTGTACAATTCCAATCACCACAGAATTGCACATATCCACAACAGCAGCCATCTTCGCAGCAACAACAGTcccagcaacagcagcagcagcaacaacaacagcaacaacatcAAATCCAACAACAGAATATATCCCAATTGAATCCGTCGGCAATGCAACCAGCTGCCGCTGTAATAACGGCCGCACCAATAATTGCCGTTCAACAGCCGCAAGCGGGCACGAATTTCGATGCGAGCAATGTATATACGAATCCACAATTTGCTGTCAATTGTGTGAGCAGTATAGCTGTATTGGAACCGACTGATAACaatatgaatataaataatCATGAAGGGAATAAAGAAATTGACAATTCAACAGAATTAgctagtagtagtagtggtgCTGGTGGTGAAAACGTTGCCGTTGGTGAAGACATATCGAAATCCAATATGCCTGTGGCAAATgcaattgataataaaattgaacaaGCAATGGATTTAGTTAAAAGTCATTTAATGTATACTgtacgtgaagaagtagaagttttaaaagaaaaaatatccgaattaatggaaaaaatccAGCAATTAGaaactgaaaataattatCTTCGTTCACAAATTCCAAAAAATCAAAGTCAAAATACTGGTTCCAccgcaacagcagcagcagcaccacAACAACAGCAATCACAAtcaacagcagcaacaacaacacaaCCAAATGTTGCTCCAACATCTATTAACGGTGGTAACATAGCAGTACAGACAGCTCCATCAGTTGCCGCTCCACCTCACGGTCAATcttctaataataatgttacACCTCTATTGAATATAATTCCACTAAATCCAAATTCAATTGGTAATagtaatgtaaatatttctgTTGGAACAAATCCTACTGCATCAAATGAGAATCAAACCATTCCAACTAATACGACTGGTGGTAATATCCATCAGCATCaccagcaacaacaacaacaacaaccgcAACAgcaacaaatgaaaaaaacgaatatttaa
Protein Sequence
MDPKREEKIHRYIPKESINYDDQTPDYMNIIGQAPTTAANAVAAEQVDKHQDSVVNVEPNPHPVRISEDVQQQTKNNDELATAAVAGAATTSNAAAANVIPTSPQYGVAIIPNNANLTTAPVNVNGGESTTNLTTESLLYAASSKPGEDIKDIHTTPSRNDRFKVVKIASLEPFRRGRWKCMDYVDEAPPPNAANLNKAVQSIGTSTVAGGVFLQTQSLPQQQIQQMLLQGGFTNGTQFFPSVPAQLISQGQYFYPQFTNMQNQTVPQPSASSMPAQFLNNQPYISAAGVITNPGGGGGGNGAPAAAATVGGFTIPQGYQNIQYVPIQAPNSAFVPTSQGVHLAANFQQSQTYAGQPTSVSQANVNQNATVNGHVYPPESQTQISNNSNNNNNNNNMPNQQAKNIIINTQPIVNNAQQPIVQSNQLPPQITGFVQFQSPQNCTYPQQQPSSQQQQSQQQQQQQQQQQQHQIQQQNISQLNPSAMQPAAAVITAAPIIAVQQPQAGTNFDASNVYTNPQFAVNCVSSIAVLEPTDNNMNINNHEGNKEIDNSTELASSSSGAGGENVAVGEDISKSNMPVANAIDNKIEQAMDLVKSHLMYTVREEVEVLKEKISELMEKIQQLETENNYLRSQIPKNQSQNTGSTATAAAAPQQQQSQSTAATTTQPNVAPTSINGGNIAVQTAPSVAAPPHGQSSNNNVTPLLNIIPLNPNSIGNSNVNISVGTNPTASNENQTIPTNTTGGNIHQHHQQQQQQQPQQQQMKKTNI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-