Basic Information

Insect: Platygaster robiniae
Gene Symbol: Sub1
Assembly: GCA_028476575.1
Location: CM052026.1:24564489-24577160[-]

Transcription Factor Domain

TF Family: PC4
Domain: PC4 domain
PFAM: PF02229
TF Group: Unclassified Structure
Description: This domain is found at the C-terminal end of Activated RNA polymerase II transcriptional coactivator p15 from humans, YdbC from Lactococcus lactis, and other PC4 family members. p15 has a bipartite structure composed of an N-terminal regulatory domain and a carboxy-terminal cryptic DNA-binding domain [1-4]. Activity is controlled by protein kinases that target the regulatory domain.
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 1.2e-18 8.3e-14 52.7 0.2 1 38 52 90 52 90 0.98

2 3 0.23 1.5e+04 -2.6 0.0 6 24 332 350 331 352 0.81

3 3 0.51 3.4e+04 -3.7 0.0 18 28 402 412 399 415 0.75

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	1.2e-18	8.3e-14	52.7	0.2	1	38	52	90	52	90	0.98
2	3	0.23	1.5e+04	-2.6	0.0	6	24	332	350	331	352	0.81
3	3	0.51	3.4e+04	-3.7	0.0	18	28	402	412	399	415	0.75

Sequence Information

Coding Sequence: ATGCCGAAATCCAAGGAACACATTTCGACCTCCGAAAGCGATGGCAGCGATAGCGAGAGCGATAAAAAGTCCAAGAAGAGGACTGAAAAACAAGCTTCCAAAAAGGAAGCCCCTGCCAAAAAAGCAAAGAAGGATTCCGAAAGTGATGATACCTGGGATTTAGGCAACAATCGCCAGATTACTGTTCGCGAATTTAAGGGAAAATTACTGATCGATATAAGAGAAATGTACTCAGACAGCAACGGAGATATGAAACCTGGCAAAAGGGGAAGCAATAATGGTACAAGAATATTTTCTAATTCGAATGTATTCAACAATTCATCGCCGATTTTCCGTTCGTTGCCTAAAACGACGAATCAAAATGCGAGGAGTTACTCAAACGACATCGCGACAGGAAAAGTTTTCGGTTTTTGGAAGATGATTTCGGAAAGTGCGGTGGTTGAATTTACGCAAAATTTTTTGGTTTCCATCCATGCGAGTACAGGATTGCCGTGGTGGAGTATTTTTGTTCTTGCTGCGGCGTCGATGAAACTGTTCATTGGTTTTCCAGTGCATATTTACATTAAACACTTGTCCAGCAGATTAGAAAAAGTTGGCGAGGAAATGAGGAAAGTGTCTGATAAATATGTGTTGGATACAAGGCATGAAGGATCAGAAAAAGGCTGGACTCCTCAGTATATGAAACGAGTTTACAATCATAAGATGTCGCAACATTACAAAGCATTAGTCGTGAAGTACAATTGTCATCCAGTGAAAGTGAGTCTTCTGGCTACGCTTCAAATTCCACCTTGGCTCTTTCTTTCCGTGTCTTCGAGAAATTTGTGCCTCATGATACCCCAACATAGTGAAGTCGCACAAGCCATTTTTGTAGAGTTGAACACTGGCGGATTTGGATGGATTACGAATTTGACAGCTGCGGATCCTTATTACATTTTGCCGCTCATTTTTATGTGTCAAAATATCGCCATTTGCGAGCTGCCGTACTACTTTAGAAACAGGGAAAGTCCGCTAAGGACGTGGCAAAAAATGGTTCATTATTCGTTGAGGACGTTAGCTTTTGCATCTGGAGGTATCGCGATGTTTGTGCCATCGGGCGTCACTTTGTTATGGTGTACCATGAGTTCAATGTCTCTGGGTCAGATGTTTTTGACGTCATCGCCAAAATTTTGCAAAATCTTGGGAATACCGAAAACGAAATCCGAACCGCACATCAATCTCAAGCAATTTTTTGAAAAAAAGACCGATATAACTTACGAGGACGAGCGTGGCGTATTATTCGTGATTGATGTCCCGATCAACGTCATTCGTAACGTTTATCAAAATGAAAGGACGCAGAGCAACGACCTTAATGTCGGAAGCTGCGAGCGTGGGCGGGCGGGCGCCGTACCAAAGTGGGCAACGTCCAGAATTTCGACCTTCTTCGGAACCCTGAGCAAAGTCGTGTTAAAATTAACAATTTTTGATCCTTCTCATAAACAGGAGGGGAAAGGGCAACCCAGCTTTTCCCTTCAATTCACCGTTACACGAGAATCACGGTCACCACAAGAACCTAGCATGATTCTGCAAGGAGGCATTACATACCTTTCTCAGAGCTATGAGAGTATTCTTGCTGACTCCCCTGGCGGAAAAGGGAGGACGAAAGATAGTCCTCCCTATAGTCCTCTGAAATAG
Protein Sequence: MPKSKEHISTSESDGSDSESDKKSKKRTEKQASKKEAPAKKAKKDSESDDTWDLGNNRQITVREFKGKLLIDIREMYSDSNGDMKPGKRGSNNGTRIFSNSNVFNNSSPIFRSLPKTTNQNARSYSNDIATGKVFGFWKMISESAVVEFTQNFLVSIHASTGLPWWSIFVLAAASMKLFIGFPVHIYIKHLSSRLEKVGEEMRKVSDKYVLDTRHEGSEKGWTPQYMKRVYNHKMSQHYKALVVKYNCHPVKVSLLATLQIPPWLFLSVSSRNLCLMIPQHSEVAQAIFVELNTGGFGWITNLTAADPYYILPLIFMCQNIAICELPYYFRNRESPLRTWQKMVHYSLRTLAFASGGIAMFVPSGVTLLWCTMSSMSLGQMFLTSSPKFCKILGIPKTKSEPHINLKQFFEKKTDITYEDERGVLFVIDVPINVIRNVYQNERTQSNDLNVGSCERGRAGAVPKWATSRISTFFGTLSKVVLKLTIFDPSHKQEGKGQPSFSLQFTVTRESRSPQEPSMILQGGITYLSQSYESILADSPGGKGRTKDSPPYSPLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -