Prob027448.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Platygaster robiniae
Gene Symbol
TFIP11
Assembly
GCA_028476575.1
Location
CM052018.1:17647331-17650405[+]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.9e-85 6.3e-81 273.8 11.4 1 275 299 566 299 566 0.98
2 2 0.42 1.4e+04 -2.8 0.0 161 188 582 608 573 661 0.63

Sequence Information

Coding Sequence
ATGGAAGCCAAAGAGGAAGAAGAGGAAGATTCAGAAGATAGTTCGAGCGATTCTGAAAAGGAACTATCTCAAAGTTTTCGAGGAAAATCATCGAAAAAATTCCCACAACACACCGACGCAGACATCGCTGGATTTAGAAAAAAAAATCGTAGATTCAATCCTGCCTTGGCCGAAAAAGGCATGGGGAACTGGGAGGTTCACACGAAAGGAATTGGTGCCAAACTCCTGTTGCAAATGGGATTTGAACCAGGAAAAGGGTTGGGGAAAACCCTGCAAGGCATCAACACTCCTGTGGAAGCCCACGTACGCCGAGGTCGCGGCGCCATTGGTGCCTATGGCCCTGAAAAACTAGCAAAACCTACTAAAACTCGCTCCCCTCCTCCCGATGAAAAAAAAACCTTGGTATCCAGTCAAAAAACGTCCCAATGGAGGAAAACCGACGCAAAGAAAAAAACAGTCTACACGTACAAGAGCGTGGACCAGCTCCTCGACGAGTCCAAGTCTAGGTCTCTGAAAACACATATATCTGGCAATGACCTCTCCAAGGTCAAGGTCATCGATTGCAGGGGCCCGGAGCAAAAAGTATTGAGTGGATATCATGCTATTGCCAACACCCAACAACGTCCAGATGAAAGCATTATCAATATTGGAAAGAAAACTACTTCAAATTTTTCGATGCCAGAGCTCCAACATAACTTGGCCATCATAGTAGATTTATGCGAAAAAGAAATTGTGGAGAAAAACAGAAAAATGAGGTATTTCAGTGATCGGTTAGTAGCGCTAAAAGAAGAAAAGGTAAAAGTTGAGAAGGTCAGAAAAGAACAAGACGAATTAATACGTAGAATAGAGCATGTTCTGAAAGTTTCGGAGAAGATGACGGTTGGCGATGTTGGACTGGATGAGATGGCGATGGAGTTTATGAAACTTAGGAATGATTATTTGAAGGAATACTTGGAATTCGAACTTGGCGAACTGGCGAGTAGTTTGGCAGGGGGGAAGATTAAGGAGATTTTTCAAAGTTGGAGCCCCCTACAGTTTCCTAGGTACCCGGTGGAGGTTTTCAGGAAATGGAAGGGGATTTTGGAGGAGGGGAACAAGACTTTACCACCTGGGGGTATGCCACCTTGGGATGGGTTGGTTTGGACCGCGTGGATGCCGTTTTTGAGAGGGGCTGTGCAGGAGTGGAATTGCAGGCAACCAGAGCCTTTGATTGTTCTCATCGAAGAATGGATGCCCCTGCTACCTGGCTGGATACTGGACAACGTATTGGAAATGGTCATACTCCCAAAACTCACCCTTGAGGTTGAGGAGTGGAACTCGACAGAAGACACCGTCCCGATCCACACCTGGATTCATCCATGGCTGTCCCTCATGGGTAGTCGCCTTAACACACATGTGTACCCTATAATTCGCAGAAAACTCGGCTCTGCGCTCATCAGGTGGAACCCAGCAGACAGAACAGCCAGACGTATGATCGAATGTTGGGCAAAGGTGTTCACGGATGCCGAAATGGAGGCGTTTTTGTTGAAAAACATTGTTCCAAAGCTCAGGGCTTCACTTAATGAGCTGGAGATCAACCCGAGCCAACAGGATATGGAACACTGGAACAGGGTTTACGAATGGAGGAACCTTCTCTCGACACACATCATGGCTGACATGTTGGATAAAAACTTTTTCAACAAGTGGATGCACGTGCTTCTCCATTGGCTCAACCACTCGCCAAATTTTGATGAAGTTACAAGCTGGTATTCAGGATGGAAATCCACATTGGATGCCAAATTACTAGCCGAGCCAGTTGTGAAAGAGCATTTTAAAAACGCCCTGGACATCATGAATCGAGCTGTCATGAATGCTGGTCCGCAATCTCTTCAGCCTGGCGCCATGGAGCAGGTTTCTTATCTTACCAATATAGAAAGAAACCATACTCCTTCGCCCCAAGCCACAGCTGCTGCTCAATCTCGCCTGGAGAGGCTTGAGGAAGTTGTAGGACTCGCGCCCCAAATTTCTCATGGACTTCGTGACCTTGTGCAACAAGCATGTGAAACTCGGGGAATTCTATTCATGCCGATTCCAAATAGAGTCATGGAAAATAACAGGCAGATGTACAAAATTGGCAAAAAACAAGCGTATTTCGACAGGGATGTCATCATTATTTCCGATGGACGAAATTGGTTCCCAAAAAGTTTTAATGATCTCGGTGCTGTTCTTGATTTTGTTCAAATTTGA
Protein Sequence
MEAKEEEEEDSEDSSSDSEKELSQSFRGKSSKKFPQHTDADIAGFRKKNRRFNPALAEKGMGNWEVHTKGIGAKLLLQMGFEPGKGLGKTLQGINTPVEAHVRRGRGAIGAYGPEKLAKPTKTRSPPPDEKKTLVSSQKTSQWRKTDAKKKTVYTYKSVDQLLDESKSRSLKTHISGNDLSKVKVIDCRGPEQKVLSGYHAIANTQQRPDESIINIGKKTTSNFSMPELQHNLAIIVDLCEKEIVEKNRKMRYFSDRLVALKEEKVKVEKVRKEQDELIRRIEHVLKVSEKMTVGDVGLDEMAMEFMKLRNDYLKEYLEFELGELASSLAGGKIKEIFQSWSPLQFPRYPVEVFRKWKGILEEGNKTLPPGGMPPWDGLVWTAWMPFLRGAVQEWNCRQPEPLIVLIEEWMPLLPGWILDNVLEMVILPKLTLEVEEWNSTEDTVPIHTWIHPWLSLMGSRLNTHVYPIIRRKLGSALIRWNPADRTARRMIECWAKVFTDAEMEAFLLKNIVPKLRASLNELEINPSQQDMEHWNRVYEWRNLLSTHIMADMLDKNFFNKWMHVLLHWLNHSPNFDEVTSWYSGWKSTLDAKLLAEPVVKEHFKNALDIMNRAVMNAGPQSLQPGAMEQVSYLTNIERNHTPSPQATAAAQSRLERLEEVVGLAPQISHGLRDLVQQACETRGILFMPIPNRVMENNRQMYKIGKKQAYFDRDVIIISDGRNWFPKSFNDLGAVLDFVQI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-