Basic Information

Insect: Platygaster orseoliae
Gene Symbol: salm
Assembly: GCA_030522825.1
Location: JAPYZL010200569.1:6364-15525[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 5e-06 0.0012 20.8 0.9 1 23 344 366 344 366 0.98

2 10 1e-05 0.0023 19.9 2.1 1 23 372 394 372 394 0.98

3 10 0.063 14 7.9 3.8 2 23 741 762 740 762 0.98

4 10 4.3e-08 9.9e-06 27.3 0.6 1 23 768 790 768 790 0.97

5 10 0.00026 0.059 15.4 2.4 1 23 800 822 800 822 0.98

6 10 0.0026 0.59 12.3 2.1 2 23 1130 1151 1129 1151 0.97

7 10 0.036 8.3 8.7 0.9 1 13 1157 1169 1157 1171 0.92

8 10 8.4 1.9e+03 1.2 0.0 13 23 1258 1268 1256 1268 0.89

9 10 1.4e-06 0.00032 22.6 4.0 3 23 1379 1399 1377 1399 0.96

10 10 2e-07 4.6e-05 25.2 0.9 1 23 1405 1427 1405 1427 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	5e-06	0.0012	20.8	0.9	1	23	344	366	344	366	0.98
2	10	1e-05	0.0023	19.9	2.1	1	23	372	394	372	394	0.98
3	10	0.063	14	7.9	3.8	2	23	741	762	740	762	0.98
4	10	4.3e-08	9.9e-06	27.3	0.6	1	23	768	790	768	790	0.97
5	10	0.00026	0.059	15.4	2.4	1	23	800	822	800	822	0.98
6	10	0.0026	0.59	12.3	2.1	2	23	1130	1151	1129	1151	0.97
7	10	0.036	8.3	8.7	0.9	1	13	1157	1169	1157	1171	0.92
8	10	8.4	1.9e+03	1.2	0.0	13	23	1258	1268	1256	1268	0.89
9	10	1.4e-06	0.00032	22.6	4.0	3	23	1379	1399	1377	1399	0.96
10	10	2e-07	4.6e-05	25.2	0.9	1	23	1405	1427	1405	1427	0.98

Sequence Information

Coding Sequence: GAGGAAAATGAGTCGGCCTCCGAGGGGGAGGAGAGCGCTCCGGAAGGGGCCGTGGACCTGCGAGCGGTGGCTCGTTCCCAGCAACCGGCGGACGAGGACGAAGAGGAGGTGCCCATGGAGGACGAGGAAGAGGACGTCACGACCGGAGGCGCAGCTGGCGCTGGCACCGTGGAAAAGCAACCAGAGAAACAGAAACCACAGCTGGACGACGACGAAGAGGACTCGCGCAAGCGTATGCACCACCGGCAGGATGCGGAGAACAACAACAGCAGCTTCGTCGGCGAAAACGCGGCCCTTTTTCCACCGGCTGGCACTAGTCACGTCACTCTCGAAGCCCTGCAGAACACGAACGTCGCTGTAGCTCAGTTTGCCCCGCCCGCGCCTCTCTCCGGCAATCCTGAAAGCGACGCCGTGCTCCAGGAGCTGGCTCTGCTCTACACGATCCAGCAGCAACATCAGGTTTTCCAGCTGCAGCTCATTAACCAAATCCAGCAGAAGCTGTCGATAAATCAGAGCAGTAGCGGAGGCCAAGCGAGCCAGTCCGAGGCTAACGATGAGAAAGACTCGCCTACACTGGCATCGCCTCTGATGACCTCCACCTCCCCGAGCCACCGTCAACGTCAGGAGGCCACTTCTACCTCCCCATTGCCTCTGACGACATCAGGCCAGCAGGTTCCGGTAAAGCAGGAGCTGGCCGTTGCGTCCTCGTCACCACCCATGTCGACCGTTATCGCGTCTCAACTTCATGGGAATGTCGGGTCGATGTCACACCAGATTCCGGCGCTTTGCAGTATCAGCTCGTCTCTAGCCTCCTCCATTATCACTAACAATGACCCACCCCCACTGAACGAGCCCAACACCCTGGAGATGCTGCAGAAGCGCGCTCAAGAGGTGCTGGACAACGCGAGCCAAGGACTTTTGGCTAATAACCTTGCAGATGAGTTGGCCTTCCGTCAGCAAAACAAGGGCTCGCGCCTATCGCCCTATGACTCGAAATCAGGAGGTGCGCGTGGAGAGCCTTTCTTCAAGCATCGCTGTCGCTATTGTGGCAAGGTTTTTGGCAGCGACTCGGCCCTCCAGATTCACATTCGGTCCCACACAGGTGAGCGACCCTTTAAATGCAACGTCTGCGGCAGTCGCTTCACCACCAAAGGCAATCTCAAGGTCCACTTCCAGAGGCACACGGCCAAATTCCCCCATGTCCAAATGAACCCTAACCCCATCCCCGAGCATCTTGACAAGTTTCACCCACCTCTTCTTCAACAGCTCGCAGCCTCGGGCCAGAGACCCATTCACTCCCCACCACCTCCACCTTTGCCTGCGTTACCATCCCAACAACAGCAACAACAGCCCCCGCCCCAATTTCACGCAACCACGTCATCAACACCGACTACCACGGCTACGACGACGGTTCACCCGTTCCTGCACCAGTCTTCGTCGCCTGTAATGCCACCCCTCAGTCTTGCCATTCCCGGCATGCCAGCCCTCTACCACCGACCACCCCACCTCCTCCCTAATCACCACCGAGACCACCACCGAGACGATCAGCAAGTCCCGGAAAACCTAAGCAAGCCCTCAAACAATAACAACAGCAGCGCCCCCTCGCCAAAATCGCCCTCTCAAAACCAACACGACAAAGTCGACATTAAGCTTGAGCGACAGTCACCCCCTCCCCAAAATGAGCGAGTCACGCCCAAAAATGAACCCGAAGACGTTGAAGACGACGTCAAGGATGATGATGGCAGAGACGAGGTTACAGCGAAAGGCGTCGCCTCCTTCGAGGACTGCAGCATGGATAGTAAAGCCAGTGATGGCGCTGGAGACGTGATGGCCATGATGATGGAGGCCGAAGATGACGACGGCGAAGAGCAGCCCGAAAACCTCTCAAATCGGCCCAACCGTATAGTTCCGCAGCAGCAATTCCATAGGGGTGGAGTGTCGCCAGCCAGTAGCAATGCCAGCAATAGCAGCCTTCAGACAAGCTTTGCCGGTATCCTCTTCCCCCAGCAACAAACTAGCGTTGCCTCTTTCCATGAGCGTGCCGATCATGTAGGCAGCGTCGATCCGGCCCGTGATCCTGCCATCTACTCAAACCTGTTGCCACGTCCTGGCAGCAACGACAATTCCTGGGAGAGCCTCATCGAAATCACCAAGACCTCCGAGACTTACAAGCTCCAGCAGCTCGTCGACAATATCGAACACAAGCTCACCGACCCGAACCAGTGCGTCATCTGCCACAGGGTTCTCTCGTGCAAGAGCGCCCTCCAGATGCACTACCGCACGCACACAGGCGAGAGGCCATTCAAATGTAAGATTTGCGGTCGTGCATTCACCACCAAAGGCAACCTCAAGACGCACATGGGCGTGCATCGCGCGAAACCACCGCTGCGCGTCCTCCACCAATGCCCCGTCTGTCACAAAAAGTTCACCAACGGCATCGTTCTCCAGCAACACATACGCCTCCACACAGGTGAACCCACTGACCTCAGTCCCGAACAAATTCAGGCAGCAGAGGTCAACGACTTCCCCTCCGCGGCCGCAGCAGGATCCTACTCCCACCACCTAGCTCCTTTTCTACCTCAGGGCTTCCTCGGACCTGCCGGCCACCCTGGCTTTCCTCTGGCGTTTCCTCCAAGAGCACACTCTCTCAGTGAAAGTGACCTCGCATTGCGCCAACATCACCATCAGCTCCAGCACCACCACCAACAACAGCAACAACAGCTGGACTGTGGGAACGAAGACGACGACGAGGACATTCGGTTCGACGACGAGGACGACGAAAGGCGCGACGCCGGCAGCCTAGCTGATGAGGATGAAGACTGCAAAGACCCGGAAGAGGCAGTAGCAGAATGCAAGGACGTGATGCCTTCTTTTTCGACTTCACTAGCTGCCCTCGAGAACCAAGTGCGAACCATCACGACTATGGCCTCGCgctcctcggcttcgcctccgACCTCCTTGACCAGTCATCGTCATCTTCACCACCATCACCACCATCAACGCTACAACGGTGGTAGCGATAAAAGCACCAGTCCACCTAGCAACGGCACGCCCCTTGACCTCACGCCTCGGGCCTCCTCCACCCCGACCTCAGCACCCTCCACCCCAACGCCACCCCCACCACCGACACATGTCCCAAGTACTCCTGGACCGCCACCCCCACCCCATCCGTTTGGTGTGTTCGCTGGTTTACTTCAGGCCGCCTCGTCTTCGTCCCCTTCGAGTCATGGACTGGCCAGTAGCGTCGTCAATAGTATCGCCCCCATCGGCGCAAGTAACCCTGTAGGACCGTTGGCCTCTCTCACAACCTCGGCCGTCCTCGCCGCGACCTCAACCTACAACCCCCTTGGCCTGGCCGTCGGTGGGCCAGCAGTACGTGGCAACACAACGTGCAATATTTGCTTCAAGACTTTCGCGTGCAATTCAGCCCTCGAAATCCATTATCGCAGTCACACCAAGGAAAGGCCGTTCAAGTGCACCATTTGCGATCGGGGCTTCTCGACGAagAACGGTTGCGATTgcgtaaaaaaagaaagaaacgGATTCGATGACGAGCCTATTAAAGTGCAACATTACCGAGAATTCCGGGCGCTACTGACGATACCGAAGACAAGGCCCGAGAATCGCAAGAACCGGGGGCGGCGAAGGTCCGAGGGGGGGCGCGGACTTACCTCTTCGAATGCCCCAGCTATTCGCGAGGACGACGTCCGCCTGCCCCCGCTGATGCCGCCATCCGCCCTCGGACTTGTCTTTACCTCGGAACCCGTTTTTCCGGGCAACATGAAGCAACACATGCTGACACACAAAATCAGAGACATGCCATCGCACCTGTTTAGCGATATGAAAGCTGCGGCGACGGCTGTGACAGGGGCTCAGCAACCTCAACAGCAACCATTGCAACTGCAGCAGCAACCTAGCCAAGAACACGAGTCGTCTACGAGTCCTCTACGCTCGGAGGATAACTCGATGACAGCGCCTCCGCCTCCTCCACCACCCCCACCGCCTCCACCACCCCCGCCACCACCTCCAATGCCGCCCATGCCGCCCTCTACCGTCGAGCCCACGAAAAGATCGGCTCCAGAAAGCGAGTTGCCCGCGCCGAAAAGGCCACCTAGCATGTCCAGCAAGCACTTGTGCCATGTTTGCAATAAGAATTTCTCCTCGTCCTCGGCCTTGCAGATACACATGAGAACTCATACCGGTGACAAGCCTTTCAAGTGTCAAGTCTGCCAAAAAGCCTTCACCACCAAAGGCAATCTCAAGGTGCACATGGGCACGCACATGTGGACAAACGGAGCGTCGCGACGCGGCAGGCGAATGTCCCTGGATCTGCCACCCCTGCCCATCACCCCCAAGGACTCGGAATTCCTGCAACGACGTCCGGATCTCTTCTATCCGTACCTTCCCGCGCCGTTCCTTAATGGTGTTCAACAAAAGCTGAACGAAGTCTCGGTGATTCAGAGCGGCAACGGCCTGATGAACGCGATGAGCAACAAGTATGCCGGAATTTTCGGATCCGTTTACGGCGGCGCCGGAGGGGGATTCCCTATGGAAAAGGCACCTCCAGGAAGCGAGAGCAAATCGCGAGTTGCCGCGGGCTCCATGCTGTTCCAGGGTGAAGCTTCGCCGACGCACTCGCCCGGAGCAGCCTCGCCTTCGCCATCGTGGCACTCGCCGGGCCCGGATCAGTCCCTACATCGGCATCATCATCACCACGTCCACGAGGTGGCTGAAGGTCAAAGGGCCGAAACTGCAAGCCCTCCTCCGTCGGTCACGGCGCACCTGCCCCCGAGGGAAGGTCTGGCCGCGTAA
Protein Sequence: EENESASEGEESAPEGAVDLRAVARSQQPADEDEEEVPMEDEEEDVTTGGAAGAGTVEKQPEKQKPQLDDDEEDSRKRMHHRQDAENNNSSFVGENAALFPPAGTSHVTLEALQNTNVAVAQFAPPAPLSGNPESDAVLQELALLYTIQQQHQVFQLQLINQIQQKLSINQSSSGGQASQSEANDEKDSPTLASPLMTSTSPSHRQRQEATSTSPLPLTTSGQQVPVKQELAVASSSPPMSTVIASQLHGNVGSMSHQIPALCSISSSLASSIITNNDPPPLNEPNTLEMLQKRAQEVLDNASQGLLANNLADELAFRQQNKGSRLSPYDSKSGGARGEPFFKHRCRYCGKVFGSDSALQIHIRSHTGERPFKCNVCGSRFTTKGNLKVHFQRHTAKFPHVQMNPNPIPEHLDKFHPPLLQQLAASGQRPIHSPPPPPLPALPSQQQQQQPPPQFHATTSSTPTTTATTTVHPFLHQSSSPVMPPLSLAIPGMPALYHRPPHLLPNHHRDHHRDDQQVPENLSKPSNNNNSSAPSPKSPSQNQHDKVDIKLERQSPPPQNERVTPKNEPEDVEDDVKDDDGRDEVTAKGVASFEDCSMDSKASDGAGDVMAMMMEAEDDDGEEQPENLSNRPNRIVPQQQFHRGGVSPASSNASNSSLQTSFAGILFPQQQTSVASFHERADHVGSVDPARDPAIYSNLLPRPGSNDNSWESLIEITKTSETYKLQQLVDNIEHKLTDPNQCVICHRVLSCKSALQMHYRTHTGERPFKCKICGRAFTTKGNLKTHMGVHRAKPPLRVLHQCPVCHKKFTNGIVLQQHIRLHTGEPTDLSPEQIQAAEVNDFPSAAAAGSYSHHLAPFLPQGFLGPAGHPGFPLAFPPRAHSLSESDLALRQHHHQLQHHHQQQQQQLDCGNEDDDEDIRFDDEDDERRDAGSLADEDEDCKDPEEAVAECKDVMPSFSTSLAALENQVRTITTMASRSSASPPTSLTSHRHLHHHHHHQRYNGGSDKSTSPPSNGTPLDLTPRASSTPTSAPSTPTPPPPPTHVPSTPGPPPPPHPFGVFAGLLQAASSSSPSSHGLASSVVNSIAPIGASNPVGPLASLTTSAVLAATSTYNPLGLAVGGPAVRGNTTCNICFKTFACNSALEIHYRSHTKERPFKCTICDRGFSTKNGCDCVKKERNGFDDEPIKVQHYREFRALLTIPKTRPENRKNRGRRRSEGGRGLTSSNAPAIREDDVRLPPLMPPSALGLVFTSEPVFPGNMKQHMLTHKIRDMPSHLFSDMKAAATAVTGAQQPQQQPLQLQQQPSQEHESSTSPLRSEDNSMTAPPPPPPPPPPPPPPPPPPMPPMPPSTVEPTKRSAPESELPAPKRPPSMSSKHLCHVCNKNFSSSSALQIHMRTHTGDKPFKCQVCQKAFTTKGNLKVHMGTHMWTNGASRRGRRMSLDLPPLPITPKDSEFLQRRPDLFYPYLPAPFLNGVQQKLNEVSVIQSGNGLMNAMSNKYAGIFGSVYGGAGGGFPMEKAPPGSESKSRVAAGSMLFQGEASPTHSPGAASPSPSWHSPGPDQSLHRHHHHHVHEVAEGQRAETASPPPSVTAHLPPREGLAA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01215484;
90% Identity: iTF_01215484;
80% Identity: -