Pequ007032.1
Basic Information
- Insect
- Platygaster equestris
- Gene Symbol
- Hr39
- Assembly
- GCA_030522785.1
- Location
- JAPYZK010001929.1:1851-8031[+]
Transcription Factor Domain
- TF Family
- SF-like
- Domain
- zf-C4|SF-like
- PFAM
- AnimalTFDB
- TF Group
- Zinc-Coordinating Group
- Description
- The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.48 9.2e+03 -3.3 10.6 46 167 182 302 167 345 0.68 2 4 2 3.8e+04 -8.3 9.8 86 160 328 397 289 413 0.38 3 4 2.1e-08 0.0004 21.0 0.0 1 23 501 523 501 529 0.91 4 4 2.9e-72 5.5e-68 231.3 0.0 76 408 540 854 523 854 0.83
Sequence Information
- Coding Sequence
- ATGTCTGACCAAAATGGGCCCACCGAGGGCCCGGGCTGGTGGACCCCAACGCAATCCTGGAAGTCTCAGTCCGGAATCTCGACTCGCAACACTGAGACGGGAAAAAACGTCTCGGTCACCACCATCAACGTTCCGCCAGCTTACGAAATGCACGATGGCAAAAGCGTCTGTAAATATCTCAGTGGACAAAACGGCGTGACGGTATCGGTAGTATCAAACTGCGGTACCGGCACAAACGACTCCGGCGCCAGTATCGAGTCCACGGAGTCGACGAGCATCGACGACGCGGAGGACAGCGACGGAGAAGTCAGCAAAATCGACTTCCGCGGCGTTAACCTCCGCTCGAAGAAAAAACGCGACTCCTCGAATCGGCAAGATGACAGCGGCTCCATCGACGATTGCGTTCTCCAGCAACCAGAACGCCCCATGTCCTGGGAGGGCGAATTGTCCGACCAGGAAATGTCTTCCAACACGATCACGAACCAGGAACTGGAAGACACTTCCATGGAAGGTGTCCAAGTGTGCAGCCCAAGTCCCGGGCCGCAAGAACAAAAGTTCCCAGTCAAACCCGAACCGGATTTTCGATCCAGTCCGAATCAAACGGCCGGATGCATTAATGACACGATCAACTTGTCCCACGCTCAACAAATGCACCAGCAGCAACAAAGGGgactcgaaaatcttgaacaaACGCAGCAGAGTGATCTGCCTTTGCTGGTAGGCAAACTTCTTGGGGGCTACAACAACCCTACGCCAAGTCACAGTCCGGTACTCAACCCGAGACACCATTTCAGTAAACACAGCCACACCAGATCTCAGGTACCCTCGCCAGACTCCGCCATCCACTCGGCCTACAGCGTCTTCAGCTCCCCCACCCAAAGCCCTCACGCCGCGCGTCACTCAGCTCTGAGTTCCGGAAGTCCCGTTCCCTCATCCTCCCTCTCCCTCTCCCGTCACAGCTTCAACAACTCAACCTCATCCCTCTCCCTCTCGCTCTCCCATTCTCTGTCCCGAAACAATTCCGATGCCTCGAGTAGCTGCTACAGCTACGGCTCCCTCAGCCCGCCGACTCACTCACCAGTCCAACAACCGCGTCACCCTCAACACCATCATCATCACCATCATCAAGGCAGTTCGTTGCACCAACCAAGTTCGTCTGCCTCAGGATCCCAGCACTTCTCTGGCACCCCGGAACTGCCCTCCGAGGTCCATCCGGACGACCAAGACGACTGCAACCGGATCCCCTCGGCCCCTTCCGGAATCTCCACCCGACAACAACTTATCAACAGTCCCTGTCCCATTTGCGGCGACAAAATCAGCGGTTTTCATTACGGCATTTTTTCCTGCGAGTCCTGCAAGGGATTCTTCAAGAGGACCGTTCAGAATCGGAAGAATTACGTTTGTTTGAGGGGCGCCGGGTGCCCGGTGACCGTGGCCACCAGGAAGAAGTGCCCGGCTTGTAGGTTCGACAAGTGCCTGAACATGGGCATGAAGTTGGAGGCCATCAGGGAGGACAGGACGAGGGGTGGGAGGAGCACGTACCAGTGCACGTACACTTTACCGTCGAGTCTCATTGTCCCAGGCAACGTTTCCTCGACCGACAAACTACCCACCGGAACCTGCCGCAGTCCAGCTCCGCCTGGCATGGAGCACCACCACTCCACCCGACACCACTCCCACAAAATGCAAGTCGTGCCGCAACTTCTCCAGGACATAATGGACGTCGAGCACCTCTGGCACTACAACGACAACGAACGGATATCCGCTCACCAGGGCGTCACGACGTCGAACGACGCCAGCGGCGCCGCGTCCCACAACGCGGACACCGCCCTGAGCAATTCCACCGACTCGAACGGGCCGAATACGTCGAACGGTAACCAGGAGTCGAGTTTCTTCATCCCCAACGACCTTGAGCACGCGGATTCCGGGACCTCCAACAGTTCGAGCAACAACCCCAACGGGAACCCGACCCAACACCCGGACTTTCTGTCCAACTTGTGCAATATCGCCGATCACAGACTTtacaaaatcgtgaaatggTGCAAGAGCTTGCCCCTGTTCAAGAACATATCGATCGATGACCAGATATGTCTGCTCATCAACTCCTGGTGCGAGCTTTTGCTGTTCTCGTGCTGCTTCCGGAGCATGAGCAGCCCCGGAGAAATCAGGGTGTCGCTTGGCAAGTCCATTACTTTGGAACAGGCCAGGCAGCTGGGGCTGGAGAGCTGCATTGAGAGGATGCTTGCGTTTACGAATAATTTGAGGAGGCTGAGGGTGGACCGGTACGAGTATGTGGCGATGAAGGTGATAGTGTTACTCACGTCGGACGCCAGCGAGCTCAAAGAGCCGGAAAAAGTGCGGGCCTCGCAAGAAAAAGCCCTCCAGGCCCTCCAGCAGTACACGATCGCGAGGTATCCGGAGATGCCCGCCAAATTCGGCGAGCTGCTCCTGAGGATCCCGGACCTCCAGAGGACGTGCCAAGCCGGGAAGGAGTTGCTGAGCGCGAAAAGGGCCGAGGGCGAGGGCAGCTCCTTCCTCATGGAGCTTTTACGGGGGGACCACTGA
- Protein Sequence
- MSDQNGPTEGPGWWTPTQSWKSQSGISTRNTETGKNVSVTTINVPPAYEMHDGKSVCKYLSGQNGVTVSVVSNCGTGTNDSGASIESTESTSIDDAEDSDGEVSKIDFRGVNLRSKKKRDSSNRQDDSGSIDDCVLQQPERPMSWEGELSDQEMSSNTITNQELEDTSMEGVQVCSPSPGPQEQKFPVKPEPDFRSSPNQTAGCINDTINLSHAQQMHQQQQRGLENLEQTQQSDLPLLVGKLLGGYNNPTPSHSPVLNPRHHFSKHSHTRSQVPSPDSAIHSAYSVFSSPTQSPHAARHSALSSGSPVPSSSLSLSRHSFNNSTSSLSLSLSHSLSRNNSDASSSCYSYGSLSPPTHSPVQQPRHPQHHHHHHHQGSSLHQPSSSASGSQHFSGTPELPSEVHPDDQDDCNRIPSAPSGISTRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAGCPVTVATRKKCPACRFDKCLNMGMKLEAIREDRTRGGRSTYQCTYTLPSSLIVPGNVSSTDKLPTGTCRSPAPPGMEHHHSTRHHSHKMQVVPQLLQDIMDVEHLWHYNDNERISAHQGVTTSNDASGAASHNADTALSNSTDSNGPNTSNGNQESSFFIPNDLEHADSGTSNSSSNNPNGNPTQHPDFLSNLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSMSSPGEIRVSLGKSITLEQARQLGLESCIERMLAFTNNLRRLRVDRYEYVAMKVIVLLTSDASELKEPEKVRASQEKALQALQQYTIARYPEMPAKFGELLLRIPDLQRTCQAGKELLSAKRAEGEGSSFLMELLRGDH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01214121;
- 90% Identity
- iTF_01214121;
- 80% Identity
- iTF_01213355;