Basic Information

Insect: Platycnemis pennipes
Gene Symbol: -
Assembly: GCA_933228905.1
Location: CAKOGJ010004469.1:68651-70507[+]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.54 6.2e+03 0.3 1.8 16 42 27 54 22 54 0.85

2 17 3.3e-07 0.0038 20.2 0.4 17 43 95 118 84 119 0.88

3 17 0.0071 82 6.3 0.5 12 43 149 177 142 178 0.83

4 17 0.065 7.5e+02 3.2 0.4 19 43 185 206 180 211 0.88

5 17 1.3 1.5e+04 -1.0 4.8 4 39 199 235 197 238 0.75

6 17 0.0043 50 7.0 0.5 4 33 256 285 254 290 0.81

7 17 0.66 7.6e+03 0.0 0.5 13 29 291 307 284 318 0.74

8 17 0.0015 18 8.4 1.5 15 38 321 345 310 345 0.81

9 17 0.0052 61 6.7 0.4 18 41 352 372 349 373 0.89

10 17 0.0048 56 6.8 0.4 18 40 380 399 375 401 0.75

11 17 0.0027 31 7.6 0.1 18 33 408 425 404 429 0.83

12 17 7.9e-05 0.92 12.5 2.5 18 38 436 457 432 457 0.86

13 17 0.033 3.8e+02 4.2 0.2 18 40 464 483 462 485 0.74

14 17 0.0028 32 7.6 1.1 18 41 492 512 487 513 0.78

15 17 0.0025 29 7.8 1.3 18 40 520 539 516 541 0.92

16 17 0.00092 11 9.1 0.6 18 41 548 568 547 572 0.88

17 17 0.0083 96 6.1 1.6 2 27 561 584 560 596 0.86

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.54	6.2e+03	0.3	1.8	16	42	27	54	22	54	0.85
2	17	3.3e-07	0.0038	20.2	0.4	17	43	95	118	84	119	0.88
3	17	0.0071	82	6.3	0.5	12	43	149	177	142	178	0.83
4	17	0.065	7.5e+02	3.2	0.4	19	43	185	206	180	211	0.88
5	17	1.3	1.5e+04	-1.0	4.8	4	39	199	235	197	238	0.75
6	17	0.0043	50	7.0	0.5	4	33	256	285	254	290	0.81
7	17	0.66	7.6e+03	0.0	0.5	13	29	291	307	284	318	0.74
8	17	0.0015	18	8.4	1.5	15	38	321	345	310	345	0.81
9	17	0.0052	61	6.7	0.4	18	41	352	372	349	373	0.89
10	17	0.0048	56	6.8	0.4	18	40	380	399	375	401	0.75
11	17	0.0027	31	7.6	0.1	18	33	408	425	404	429	0.83
12	17	7.9e-05	0.92	12.5	2.5	18	38	436	457	432	457	0.86
13	17	0.033	3.8e+02	4.2	0.2	18	40	464	483	462	485	0.74
14	17	0.0028	32	7.6	1.1	18	41	492	512	487	513	0.78
15	17	0.0025	29	7.8	1.3	18	40	520	539	516	541	0.92
16	17	0.00092	11	9.1	0.6	18	41	548	568	547	572	0.88
17	17	0.0083	96	6.1	1.6	2	27	561	584	560	596	0.86

Sequence Information

Coding Sequence: ATGAGAGGATCGGTTCGAGGCAGGAGTAGCGGTCGGGGTGGTAGTCGTTCGTGTTTAGGTCGGCGAAAAGTGAGGGAGAAATTCATTTGTGTTGAATGTGGAGCTTCGTCTGTCTGCAAGCTTACTCTGTCGACCCACATAAGGGCTCACCTGAGAAGGAAGGAGGACACGTGTGCCGCTAAGGGAGGAGGACAGGGTCAGGAGAATGAACATGGAACCAACATTTCCCTTCCCAATTATGAAGAGGTGTTTGGCACGTGTAGAGACTTGGACCGTGAGGGGTTCATCTGTGATCATTGCGGTAAGGATTACTCTCGGAAGACCGAACTGATAAGCCACTTACGTTCCGTCCACCTTAAGGTGTGTGTCGTGGAAAGCACGGCCCCCAAGAAGATATTCAGCAGCCAAAAGAGCTCCCGTGTGTTCACCCAAAAACCTAAGAAGAGGGAGAAGACGTTGTGGGTTTGTGATTGCTGTGGCAAGGGTTTCCTCAAAAAGGCCCAGCTCGTGAGACACATCACCTCGGTCCACCTCGGACGGAAGCCTTTATTTTGCGACATTTGTTCCAAGAGCTTCTCAGGAAATCTCTGCCTAAAGGCCCACGTAATTGCGGTACATATTGGAGAGAGGCGTTTCAAATGTGAGAAATGCATTAAGGCTTTCAAGACAAACAATCACCTGAAGGTTCACATGCTGACGCACTTGGAGAAGCGCCCTTTCCCCTGCACCCTCTGCCCGAGATCATTCCTGCTCGAGTACCTACTCAAGTCCCACATGGAGTCACACAGCAGACCAAAGCACACATGTGAGATATGTGGGAAGGATTTCGAAAGCAAACGTCTACTTCAGACGCACAGACAGAGGCACTCAGAGGAGAGATTGTTCAAATGTGAGCAGTGTCCGAAAGCTTACAAGACAAAAAGTGATCTCAATctgcattcacttgttcattcgcgcctgcgcaagtattcttgtggagtgtgcgggaagaagttcacccagagtgggagcctgagcagtcacatgaggacccacgacggaaagaggccttttgagtgtgaggtgtgcagcaaaaagttcgctcggaagaataccttgaaggtgcacatgaggacccatgacggcaagaagccgtttgagtgtgagctgtgccacaagaagttcgctttgaaaggtaacttaagcggtcatatgaggacccatgacggacagaagccgtttgagtgtgagctgtgtcacaagaagttctcccagggtggggctctgggaactcacatgagggtccatgacggaaagaggccgtttgaatgtaagctgtgccacaagaaattctcccggagttcccatgtgagcacacacatgaggacccatgacggaaagagaccgtttgagtgtgaacagtgccacaagaagttcgcttggaaaggtaacttaagcggtcatatgaggacccatgacggaaggaagccgtttgagtgtgaggtttgccacaagaagttctcccagagtgggcacctaaagaatcacatgaggacacatgatggaaagagaccatttgagtgtgaagtatgccatcacaagttctcctttagtagcaacctgaggacgcacatgaggatccatgacggaataaggccgtttgagtgtgaggtttgccacaagaagttctcccagagtgggaacctaaaggatcacATTGAACGGCATAAAGAGAGAAGTCTCGAATGTAAGCTATGCCACAAACTGTTCAAAACGATATTGGATCTGAGGGTTCACGTGAAGAGGCACAGTTCCAAAAAAATGGCGTCCACAAGTGTGAGGAGTGCTGTAAGACGTTCCAATCTAAGGACGCACTGA
Protein Sequence: MRGSVRGRSSGRGGSRSCLGRRKVREKFICVECGASSVCKLTLSTHIRAHLRRKEDTCAAKGGGQGQENEHGTNISLPNYEEVFGTCRDLDREGFICDHCGKDYSRKTELISHLRSVHLKVCVVESTAPKKIFSSQKSSRVFTQKPKKREKTLWVCDCCGKGFLKKAQLVRHITSVHLGRKPLFCDICSKSFSGNLCLKAHVIAVHIGERRFKCEKCIKAFKTNNHLKVHMLTHLEKRPFPCTLCPRSFLLEYLLKSHMESHSRPKHTCEICGKDFESKRLLQTHRQRHSEERLFKCEQCPKAYKTKSDLNLHSLVHSRLRKYSCGVCGKKFTQSGSLSSHMRTHDGKRPFECEVCSKKFARKNTLKVHMRTHDGKKPFECELCHKKFALKGNLSGHMRTHDGQKPFECELCHKKFSQGGALGTHMRVHDGKRPFECKLCHKKFSRSSHVSTHMRTHDGKRPFECEQCHKKFAWKGNLSGHMRTHDGRKPFECEVCHKKFSQSGHLKNHMRTHDGKRPFECEVCHHKFSFSSNLRTHMRIHDGIRPFECEVCHKKFSQSGNLKDHIERHKERSLECKLCHKLFKTILDLRVHVKRHSSKKMASTSVRSAVRRSNLRTH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01212799;
90% Identity: iTF_01212799;
80% Identity: iTF_01212799;