Pros027601.1
Basic Information
- Insect
- Platycheirus rosarum
- Gene Symbol
- DMRT2
- Assembly
- GCA_963971375.1
- Location
- OZ020508.1:47937054-47938198[+]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.1e-24 9.9e-20 71.7 13.1 1 46 21 66 21 67 0.97 2 2 0.24 3.4e+03 -0.4 0.0 32 45 183 196 182 198 0.84
Sequence Information
- Coding Sequence
- ATGTCTATTATTCCAATTAAATCAATTGAACATGATAAGGAATCGTTAAAAAAAGGATTACGAACTCCGAAATGTGCCCGATGCCGTAATCATGGAGTGATCTCCTGTATCAAAGGTCACAAGAAACTATGTCGCTGGAGGGATTGCTCTTGTCCCAACTGCCAATTGGTAGTTAATCGGCAAAAAGTTTTGGCAGCTCATATCGCCCTGCGTCGTCAACAGACTCTAGAATCCTTAAACTCCGATTCATCCAGTAGGAGTTCCCAATCTAAGGAAGCGTTATTGGCCCAGAAGTCAATCTACAAACAAAAACGTCGTTCTCTACAAAAATCATCACAACACTTGGCCGCAGCTATTGAAGaATCCCGTCAACAATATGCATTCATACAGTCACCATTACTGGACAGAATTCGGAAACGAAGAGCGTTTGCTGATCCAGAATTGGACTTGGTCATAGAAGCGACCCTGGTTGCTGCAACACAGATAGCAATTCAACAAAATTTCTATTTCCCTCAAGATTTGAGTTTAGTTCAGCCAAGTTTGAGCAGTCAATGTGACGTTTTTATGGAAAGATCTAACAGGATGCATACATCAACACTGCCTGGGTTAAAGGAAGCAAATACAAATCTTAGCTGTGAAGCGCGTTTATATTCAAGTCGACCTAAACTTTCTTTTTCAATTGATTCGATAATGGACAAATGA
- Protein Sequence
- MSIIPIKSIEHDKESLKKGLRTPKCARCRNHGVISCIKGHKKLCRWRDCSCPNCQLVVNRQKVLAAHIALRRQQTLESLNSDSSSRSSQSKEALLAQKSIYKQKRRSLQKSSQHLAAAIEESRQQYAFIQSPLLDRIRKRRAFADPELDLVIEATLVAATQIAIQQNFYFPQDLSLVQPSLSSQCDVFMERSNRMHTSTLPGLKEANTNLSCEARLYSSRPKLSFSIDSIMDK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -