Pign034720.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Platerodrilus igneus
Gene Symbol
Hr39
Assembly
GCA_036346225.1
Location
JARFIW010000439.1:480988-521429[+]

Transcription Factor Domain

TF Family
SF-like
Domain
zf-C4|SF-like
PFAM
AnimalTFDB
TF Group
Zinc-Coordinating Group
Description
The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 0.75 1.5e+05 -4.9 10.0 42 188 109 247 92 277 0.50
2 4 1.7e-08 0.0034 20.3 0.1 1 21 382 402 382 429 0.87
3 4 0.0011 2.3e+02 4.4 0.0 76 117 433 480 403 517 0.68
4 4 3.8e-73 7.7e-68 233.2 0.0 167 408 454 713 447 713 0.89

Sequence Information

Coding Sequence
ATGGCTGCTGAAATGAGGTCCCCTAATGTTTCTGTAACACCAATAAATGTAGAATCCTATCCATCTGCTTCTCTCACCAATGGGATTCTACAGAGTCATGATAGCATATTATCATCTAATATTACAAATGGTGATACTTTAGATAGCAGCTCAGATGCAGAAGTAGCTCAAATAGATTTTCATTCAACAACTGTTAACTTAAGACACAAAAAACGAGATGAAAATGATATTCCTAGACCTATGTCGTGGGAAGGTGAACTGTCTGATGGTGAGCAAGATATGTGTGTTGAATCAAATGAAAACTCCCAGGTTCCCGAAAACCTTTCTGTATCACAAAATAAACAAACTATTATTTTACCTTCTGAACTCAAGGAAAGTCCAATACTAAGGATAAAACAGGGTTCTGGGAGTGTAAATAATTACTCACTACATAGTACTCCAAGTAATTCACCATTGTTAAACCAACGGCATCCTGGTAGTGTTCCTCTTTTAACGCACAAAGATATTATGCATAAGACTCTTAATGTTCCACCAACACCAAGCCCGGACTCTGCAATTCATTCTGCATATAGCGTTTTTAGTTCTCCGAATCAGAGTCCTTTGACTCAGAGACATTTAACACCAAGTTTGAGTCGGAATAATAGTGATGCTTCTCATTCTAGTTGTTGTAGTTATTCAAGTGTGTCCGTTTCTGTTTCCCCTACACAACAGTTTTCTCCAACACATAGTCCAATACAGGGTCGACATTTATCCACAAGTTTACACAGTAGTCCATTACACCATAATGTTTTATATAGAAATATACAAGATGAAACAAGCCTTCAATATACCCATGACTTTGAAGGCTTAGAGGAGACTGAAGATAAGACTGGTTTATTACATACTTCTCTTCCTGCGCAACCAGGAATATCACGGCAGCAATTAATTAATAGTCCTTGTCCAATTTGTGGTGATAAAATATCGGGATTTCACTATGGGATTTTTAGTTGTGAATCTTGCAAAGGTTTTTTTAAACGCACTGTACAAAATCGTAAAAATTATGTTTGTTTAAGAGGAGCTGTATGTCCTGTTACAGTAGCTACTCGAAAAAAATGTCCTGCTTGTCGATTTGATAAATGTTTACAATGTGGCATGAAGCTTGAAGCAATAAGAGAAGACCGTACAAGAGGTGGCCGTTCAACATATCAATGTTCATATTCTCTACCGCCTACGTTAACAGGTCATTCGGAATTACGAGCTAGTGCAACAGATCTTAGACAGGGTTATGGAGACCAAGCTCAGCATTTGCTAAGAGTAAAATTGGAGCCAACCGAGTCTGGAGCATTACATTTTAAAAGATCTGGTTCATCAAGTGCTAGATTAGGAGTCCCTCCATTATTGCAGGAAATAATGGAAGTGGAGCACCTATGGCACTACAGTGAAATGGAATTGAACAGGTTTAGTGATAATACATTAGAAAGTCAAGCAAGTTCTAGCGGTTCTGTACACAATCTATCATCACATCCCTTACTTGCTGGTACAGCGCTTGTTGGTTCATCAGAAACGAATCCTGATTTCATAGCAAATTTGTGCAATATTGCTGATAAtcgtttatataaaatagtaaaaTGGTGTAAAAGCCttcctttatttaaaaatatttctATTGATGATCAGATATGTTTGTTAATTAATTCTTGGTGTGAATTACTCTTATTTTCCTGTTGTTTTCGATCCATGCCTACACCAGGAGAAATTCGAATATCATTAGGTAAAAGTATCAATTTGGAACAAGCAAAGGATATGGGTATAGGAGCATGTATTGAGCGTATGTTAAATTTCACCGATCACCTTAGGAGACTGAGAGTAGATAAATACGAATATGTTGCCATGAAAGTTATAGTTTTATTAACATCGGATACATCAGAATTGCGTGAAACTGAAAAAGTCCGAGCATCTCAGGAAAAAGCCCTTCAAGCTCTGCAACATTATACACTAGCACATTATCCAGATTCTCCAgcaaaatttggtgaacttttACTTCGAATACCAGAATTACAACGAACATGTCAggtTGGTAAGGAAATGTTAACTATTAAATCAAAAGATGGAGAAGGGCCCAGTTTCAACCTGCTTCTGGAGCTGCTACGTGGGGACCACTAA
Protein Sequence
MAAEMRSPNVSVTPINVESYPSASLTNGILQSHDSILSSNITNGDTLDSSSDAEVAQIDFHSTTVNLRHKKRDENDIPRPMSWEGELSDGEQDMCVESNENSQVPENLSVSQNKQTIILPSELKESPILRIKQGSGSVNNYSLHSTPSNSPLLNQRHPGSVPLLTHKDIMHKTLNVPPTPSPDSAIHSAYSVFSSPNQSPLTQRHLTPSLSRNNSDASHSSCCSYSSVSVSVSPTQQFSPTHSPIQGRHLSTSLHSSPLHHNVLYRNIQDETSLQYTHDFEGLEETEDKTGLLHTSLPAQPGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAVCPVTVATRKKCPACRFDKCLQCGMKLEAIREDRTRGGRSTYQCSYSLPPTLTGHSELRASATDLRQGYGDQAQHLLRVKLEPTESGALHFKRSGSSSARLGVPPLLQEIMEVEHLWHYSEMELNRFSDNTLESQASSSGSVHNLSSHPLLAGTALVGSSETNPDFIANLCNIADNRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSMPTPGEIRISLGKSINLEQAKDMGIGACIERMLNFTDHLRRLRVDKYEYVAMKVIVLLTSDTSELRETEKVRASQEKALQALQHYTLAHYPDSPAKFGELLLRIPELQRTCQVGKEMLTIKSKDGEGPSFNLLLELLRGDH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00951009;
90% Identity
iTF_01210639;
80% Identity
iTF_01210639;