Pign050484.1
Basic Information
- Insect
- Platerodrilus igneus
- Gene Symbol
- LRRFIP2
- Assembly
- GCA_036346225.1
- Location
- JARFIW010000634.1:5004251-5004872[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.16 1.1e+04 -1.2 0.6 135 135 57 57 10 93 0.56 2 2 7.3e-27 4.9e-22 82.0 14.8 1 89 106 181 106 183 0.90
Sequence Information
- Coding Sequence
- ATGGAAAATATACAGAAAAACAACTCACATTCATCTGAAAGTCTTGATTCTCTTGAAGAcattttaaatgatttaaattacgAAGATGAAAGTGTGAAAGAAATTGAAACTGACAATGATCTTGACCTGAGTTTACAACATGCCAGACTTTCTGCATTAAATAGTTTAGTGCAGACCAATAGTGAATACAGTGAAAAACAGTATAGTgatgaaaataaaactaatgacCTATATAATTTGAAAgataatgttatttataaaaatagtacAGATGAATCTGTTATTAGCCAGTTCCTTAACCAATGCAATGGTGATgcAGAAGCTCGTTTGTTGGCTCGAAGACAAGCTAGGGCTGAAGCACGAGATATACGTATGCGAGAACTAGAACGGCAACAGAGGGAACAAGAAGAAAATGCAGATAGACAGTATGACATGTTGGAAGCAACGTCTCGTGCTGCTAGAACTACTGGAAATCGATATCTTTCCAGTCGAAGAAGCTCTGAAGATTCACTTGAAGATGGAGGAAGCATTCGAGAAATTAAGGTAATAAATTAA
- Protein Sequence
- MENIQKNNSHSSESLDSLEDILNDLNYEDESVKEIETDNDLDLSLQHARLSALNSLVQTNSEYSEKQYSDENKTNDLYNLKDNVIYKNSTDESVISQFLNQCNGDAEARLLARRQARAEARDIRMRELERQQREQEENADRQYDMLEATSRAARTTGNRYLSSRRSSEDSLEDGGSIREIKVIN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -