Pign050483.1
Basic Information
- Insect
- Platerodrilus igneus
- Gene Symbol
- Lrrfip2
- Assembly
- GCA_036346225.1
- Location
- JARFIW010000634.1:4969910-4974331[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.7e-71 2.5e-66 227.5 14.0 95 300 1 215 1 215 0.92 2 2 0.0082 5.5e+02 3.1 1.6 120 165 213 258 212 259 0.92
Sequence Information
- Coding Sequence
- atggaagaaaagtttcgGAAAGCCATGATAGCTAATGCTCAATTAGATAATGGTAAAGCTTCACAAACATATCAGTTGGAATTACTTAAAGATAGATTAGAAGAGTTAGAAGAAGAACATTCCCAACTGCGCCGTGAACATAGAGATAAATGTAGAGAATTTGAACAATTAAAAAGGTTATCAACTCGGCTTAAAGAAGATTTGGCTGTGACACAAGCTGCACTAGAAGAGCGCGATCAATTGATTGCTGATAAGGGATTAGTAGTAATAGTAGAAGATATTATCttgcctaatgatgatgaaaatagtATTAATGAAGGAAGTGGTAGTAGTATGGTTAATACATCTAGGAAATCTTTAGTTAGTGCAGAAAATGCACATTTATTAGAAAATGTGGGGGAAGGAAGCCTAGATGTACGATTAGGAAGATTTGCTGCCGAAAAGAAAGATCTTCAAGATCAAATTAGTCATTTAAGGTTAGAATtggaggaagaaagaaataaacGAAGAAAAAGTAGTGGTGTGATTTCAAATGGACCATTAAATGATTCAGACTATGATCTAGATGATCCAAATCGTGATATTAGTCGACAGTTAGCTGATTATAAATTTAGAGCTCAAAAAGCAGAACAAGATGTTGCTACACTTCAAGCGACAGTTGCAAGGCTTGAAAGCCAAGTTATTAGGTATAAATCAGCAGCCGAATTGTATGAAAAATCGGAGGAAGCTTTAAAACAAGAGAAAAGAAAGCTGCAAAGAGAGGTGAATAATTTGCAATAA
- Protein Sequence
- MEEKFRKAMIANAQLDNGKASQTYQLELLKDRLEELEEEHSQLRREHRDKCREFEQLKRLSTRLKEDLAVTQAALEERDQLIADKGLVVIVEDIILPNDDENSINEGSGSSMVNTSRKSLVSAENAHLLENVGEGSLDVRLGRFAAEKKDLQDQISHLRLELEEERNKRRKSSGVISNGPLNDSDYDLDDPNRDISRQLADYKFRAQKAEQDVATLQATVARLESQVIRYKSAAELYEKSEEALKQEKRKLQREVNNLQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -