Pign037884.1
Basic Information
- Insect
- Platerodrilus igneus
- Gene Symbol
- -
- Assembly
- GCA_036346225.1
- Location
- JARFIW010000453.1:21442396-21443019[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.4e-10 1.3e-07 34.5 0.0 5 39 1 36 1 42 0.90
Sequence Information
- Coding Sequence
- ATGCGTCAGGCTGTTGAGGAGGTACTGGAGGGAAGAATGGGGTATCTCAAAGCTTCTAAAGAATATGGGGTTCCTCGTACAACCATTGAAGCAAGGGCGAAGAAAATTAAACAGGGTGTTCTTAACAGAAAGGATTCAGCAAAAAAAGGACTAGGACGTCATAAACCTGTTTTTAGTCCTGCTCAGGAAGAGGAATTAGTGGAATATATTTTGGGTATGGAATCACGCCTGTTTGGTTTAACTCTCAATACATTAAGGTGTTTGGCATTTGAATTAGCAGAACGCAACGGCTTGCCTAATAGATTTAATAAGAGCAAGAAAAAGGCTGGTAAAGCATGGCTGTATGCTTTTCTCAATCTGCATCCGACTATTAAACTTCGATCTCCTGAGCCAACCTCACTAGCTAGGGCAATAGGTTTCAATAGGCCTTCCGTAAACAAATTTTTCTCGCTGATTACTGAAACGATGGAGAAACACAAAATACCCCCTGAGCGTATTTATAACATCGATGAAACAGGGATTATGACAGTACCAAAAAAACGGTCTAAATGTTTATCATTGCGTGGAAAGCGACAAGTTGGCTGCTTGTCCTCGGCTGAACGTGGAGTTCTGGTTACAGTGTAG
- Protein Sequence
- MRQAVEEVLEGRMGYLKASKEYGVPRTTIEARAKKIKQGVLNRKDSAKKGLGRHKPVFSPAQEEELVEYILGMESRLFGLTLNTLRCLAFELAERNGLPNRFNKSKKKAGKAWLYAFLNLHPTIKLRSPEPTSLARAIGFNRPSVNKFFSLITETMEKHKIPPERIYNIDETGIMTVPKKRSKCLSLRGKRQVGCLSSAERGVLVTV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00002135; iTF_01210340; iTF_00002053; iTF_01210344; iTF_01210181; iTF_01210187; iTF_01210158; iTF_01210353; iTF_01210167; iTF_01210306; iTF_01105635; iTF_01210156; iTF_00001976; iTF_00002267;
- 90% Identity
- iTF_01210156;
- 80% Identity
- -