Basic Information

Insect: Platerodrilus igneus
Gene Symbol: -
Assembly: GCA_036346225.1
Location: JARFIW010000831.1:1670323-1672142[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 2.3e-10 9.3e-08 35.0 0.0 5 39 1 36 1 42 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	2.3e-10	9.3e-08	35.0	0.0	5	39	1	36	1	42	0.90

Sequence Information

Coding Sequence: ATGCGTCAGGCTGTTGAGGAGGTGCTGGAGGGAAAAATGGGGTATCTCAAAGCTTCTAAAGAATATGGGGTTCCTCGTACAACCATTGAAGCAAGGGCGAAGAAAATTAAACAGGGTGTTCTTAACAGAGAGGATTCAGCAAAAAAAGGACTAGGACGTCATAAACCTGTTTTTAGTCCTGCTCAGGAAGAGGAATTAGtggaatatattttgtgtatgGAATCACGCCTGTTTGGTTTAACTCTCAATGCATTAAGGTGTTTGGCATTTGAATTAGCAGAACGCAACGGCTTGCCTAATAGATTTAATAAGAGCAAGAAAAAGGCTGGTAAAGCATGGCTGTATGCTTTTCTCAATCGGCATCCGACTATTAAACTTCGATCTCCTGAGCCAACCTCACTAGCTAGGGCAATAGGTTTCAATAGGCCTTCCGTAAACAAATTTTTCTCGCTGATTACTGAAACGATGGAGAAACACAAAATACCCCCTGAGCGTATTTATAACGTCGATGAAACAGGGATTATGACAGTACCAAAAAAACggtctaaatatttatcattgtgTGGAAAGCGACAAGTTGGCTGCTTGTCTTCGGCTGAACGTGGAGTTCTGGTTACAGTGGAGATCTGCATGAGTGCTAGTAGTGCATTCATGCCACCGTTGTTCGTTTTCCCAAGAGCTAGGGCAAAGCCAGAACTGTTAGATGATGCTCCCCCTGGTGGTACAGCTCATTACCATCCTTCAGGGTGGatgcaaacggaaatatttttgaGTTGGTTCGATAAATTTATTGCTTTTTCCAACCCTTCTAAAGAAAATCCAGTTCTTTTGCTTCTAGATGGCCATGCCACCCATACCAAGAATATAGAGCTAATTCATAGAGCTAGGGATAACGGTGTTGTGTTACTGTGCTTTCCACCGCATACAACACACCGTCTACAACCAATAGACATGCAACAACATCCAGGCAGGCCTATTACTATTTCTCAAATAGGCAAACTTTTTGGAAATGCTTTTATGAAAGCCGCTAGCGTCCAAACCGCAGTTAGCGGATTTAGAAAAACGGGGATACATTCAGTAAATCCAGAGATCTTCCCAGACTGGATGTTTGAACCGGCCGAGACTACAAATAGGCCCACTCAAGGTGAAATAAATGATAACCAGTTACCAGAACCTAGAAACTCTCCACCTAGAACACCATTGAGAACACCACCGAGGACACCACCAAGGACACCACCAAAAAGTTTACCGAGATCACCACTGAGAAAACCACCAAGCACAACACCGATTCCTACAGAGCAGTTTTATGCAAATTCGACTCCTTCATGTTCCCATACCACGCAGAATTTTGTTATAACGCCACAACAGAAGAAGGGTAAAACTGCAGTGTTAACATCGACACCATATAAAGAGGAACTAGAAGAATCAATTTCTAAAAGACTTTCTACAAAGAAGCCAAAATTAAACTTAGGAGATACTGAAAAAACAGCCCATATagccaaactaaataaaaaagaCAAAATAAATGACAATGGGATGACGACTAGAaaagacgtaacagtaaataacgCAAATAAGAAAGACAGCGGCAGTGCAAAAGAAACGAGCGTGAGAGACAAAAAACAAAATGATACCAAgggtcaaaaaaatataaaaagaaggaAGTTGAGAGAAAGTGATGATTCAAGTTCAGAAGATGAATGCGAAGAAGCAGTTTGA
Protein Sequence: MRQAVEEVLEGKMGYLKASKEYGVPRTTIEARAKKIKQGVLNREDSAKKGLGRHKPVFSPAQEEELVEYILCMESRLFGLTLNALRCLAFELAERNGLPNRFNKSKKKAGKAWLYAFLNRHPTIKLRSPEPTSLARAIGFNRPSVNKFFSLITETMEKHKIPPERIYNVDETGIMTVPKKRSKYLSLCGKRQVGCLSSAERGVLVTVEICMSASSAFMPPLFVFPRARAKPELLDDAPPGGTAHYHPSGWMQTEIFLSWFDKFIAFSNPSKENPVLLLLDGHATHTKNIELIHRARDNGVVLLCFPPHTTHRLQPIDMQQHPGRPITISQIGKLFGNAFMKAASVQTAVSGFRKTGIHSVNPEIFPDWMFEPAETTNRPTQGEINDNQLPEPRNSPPRTPLRTPPRTPPRTPPKSLPRSPLRKPPSTTPIPTEQFYANSTPSCSHTTQNFVITPQQKKGKTAVLTSTPYKEELEESISKRLSTKKPKLNLGDTEKTAHIAKLNKKDKINDNGMTTRKDVTVNNANKKDSGSAKETSVRDKKQNDTKGQKNIKRRKLRESDDSSSEDECEEAV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01210210; iTF_01210342; iTF_01210243; iTF_01210339; iTF_01105636; iTF_01105633; iTF_01105641; iTF_01105685; iTF_01105630; iTF_01105663; iTF_01210251; iTF_01210215; iTF_01210285; iTF_01210192; iTF_01210195; iTF_01210347; iTF_01210197; iTF_01210375; iTF_01210327; iTF_01210235; iTF_01210202; iTF_01210173; iTF_01210241; iTF_01210242; iTF_01210245; iTF_01210246; iTF_01210183; iTF_01210206; iTF_01210351; iTF_01210200; iTF_01210395; iTF_01210316; iTF_01210300; iTF_01210366;
90% Identity: -
80% Identity: -