Basic Information

Insect: Plagodis pulveraria
Gene Symbol: -
Assembly: GCA_963890685.1
Location: OY982954.1:25550746-25560700[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 6.8 1.1e+03 2.0 1.2 1 23 54 77 54 77 0.94

2 20 0.0036 0.6 12.3 2.4 1 23 84 107 84 107 0.98

3 20 4.5 7.5e+02 2.6 3.9 1 23 189 211 189 211 0.97

4 20 0.0018 0.3 13.2 1.0 2 23 217 238 216 238 0.97

5 20 2.3 3.8e+02 3.5 1.5 1 23 244 266 244 267 0.94

6 20 0.19 31 6.9 3.4 2 22 500 520 499 520 0.95

7 20 5.2 8.7e+02 2.4 0.4 1 20 620 639 620 642 0.70

8 20 0.57 95 5.4 0.4 2 23 776 797 775 797 0.96

9 20 0.081 14 8.0 1.0 3 23 876 896 875 896 0.98

10 20 0.033 5.5 9.3 0.5 1 23 904 926 904 926 0.97

11 20 0.13 22 7.4 3.4 1 23 966 988 966 988 0.95

12 20 0.00025 0.042 15.9 4.0 1 23 996 1018 996 1018 0.99

13 20 0.11 18 7.7 0.6 1 23 1170 1192 1170 1192 0.97

14 20 0.04 6.7 9.0 0.2 1 23 1198 1220 1198 1220 0.97

15 20 0.0085 1.4 11.1 1.6 1 23 1286 1308 1286 1308 0.95

16 20 0.01 1.7 10.9 1.1 1 23 1314 1336 1314 1336 0.96

17 20 0.0071 1.2 11.4 2.6 1 23 1426 1448 1426 1448 0.97

18 20 0.00018 0.03 16.4 1.4 1 23 1454 1476 1454 1476 0.99

19 20 0.84 1.4e+02 4.9 2.0 1 23 1567 1589 1567 1589 0.96

20 20 1.4 2.3e+02 4.2 4.2 1 23 1606 1628 1606 1628 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	6.8	1.1e+03	2.0	1.2	1	23	54	77	54	77	0.94
2	20	0.0036	0.6	12.3	2.4	1	23	84	107	84	107	0.98
3	20	4.5	7.5e+02	2.6	3.9	1	23	189	211	189	211	0.97
4	20	0.0018	0.3	13.2	1.0	2	23	217	238	216	238	0.97
5	20	2.3	3.8e+02	3.5	1.5	1	23	244	266	244	267	0.94
6	20	0.19	31	6.9	3.4	2	22	500	520	499	520	0.95
7	20	5.2	8.7e+02	2.4	0.4	1	20	620	639	620	642	0.70
8	20	0.57	95	5.4	0.4	2	23	776	797	775	797	0.96
9	20	0.081	14	8.0	1.0	3	23	876	896	875	896	0.98
10	20	0.033	5.5	9.3	0.5	1	23	904	926	904	926	0.97
11	20	0.13	22	7.4	3.4	1	23	966	988	966	988	0.95
12	20	0.00025	0.042	15.9	4.0	1	23	996	1018	996	1018	0.99
13	20	0.11	18	7.7	0.6	1	23	1170	1192	1170	1192	0.97
14	20	0.04	6.7	9.0	0.2	1	23	1198	1220	1198	1220	0.97
15	20	0.0085	1.4	11.1	1.6	1	23	1286	1308	1286	1308	0.95
16	20	0.01	1.7	10.9	1.1	1	23	1314	1336	1314	1336	0.96
17	20	0.0071	1.2	11.4	2.6	1	23	1426	1448	1426	1448	0.97
18	20	0.00018	0.03	16.4	1.4	1	23	1454	1476	1454	1476	0.99
19	20	0.84	1.4e+02	4.9	2.0	1	23	1567	1589	1567	1589	0.96
20	20	1.4	2.3e+02	4.2	4.2	1	23	1606	1628	1606	1628	0.98

Sequence Information

Coding Sequence: ATGCTACAGCAGATGTCCTCGCCGCTGAGCGCGCAACTCGGCGAGGTCACAGCTATCGCGCGCCCCCTTGAAGGCCGCCTCTGCGTGGACGTCCTCTCGGAGGCCTCGTCCGACGCAGCGGAAGATTTTGAATTACCGCATTGCAAGATAAGGAGAAACTACAACTGTACGAAGTGCACGTTCTATACACAGAACCCGCGCGCTTATCTCTTGCACACGCGCGACGTTCACTTTGGAAGATTCAAGATATACGAGTGTCCACATTGTGTATATGCCTCGCAACACCAACAAAAGCTTATCAGACATATGAAGATGGTGCATGGAGGGTCCCCTTTGCCTTCAGGGTCGACCCTCAGAGTGGAAATGGAACTTCCGGTTAGAACGGAAACGGAACATCCAGCTTCTAACAATCCCGCGGGCAACATGGAGCGAATGGAAGATTTACTCGAAGAAATCGAGGAATGCGACGATATGATTGACGAAGACGGTGAAGATCTGCCCGAGCACATCGACTACGGTGACGTTAGGAGTAACTTCTCGGGACCCAAGGGGAAGAGCAGGTTTTTCTCGTGTGAAAAGTGTAACTACGTCACCCACATAAAAGCGAGATATACCAAGCACGTCAAGTACCACTCGATGCCGATGATAAAGTGCACGATGTGCGACTTCCGCACTCCATACAAATGGAATTTGGATCGTCACATGAAGAACCACGGCGGGACAGGGAGCTTCGTGTGTTCGAAGTGTACCTTCACCGCGGACATCAAGCAGAGCCTGACCGTTCACGAAATGAATCATCACAATCCGCCGGTGGGGCAAGTCGGCAGCCGACGCCGCAATCGGGTGGGCGGCAGTGACTTGACGGCCGTCGACCAGATGAGCGCTCTTCCCAAGGATGAAGAAAGTAGCGGCGATTCGCACTCCTCGCATTCGGCCTCGGAAACCATGGGCTTACAATACGCAGAACGAGAAATGGTCAGCTGCAATAGCGATTCAAATGACGCCAATTCGTCGCACGCCGATTTAAACAGAGATGGGACAAATGACGCCTCCGGCCAACATTCACCCAACTCCGGGACCGACGACCCGAAATCACAAAAACAGAGCCGGAAGGCCCCTCGGCCGATACCGCAACTCATCCCACTGAACTCGTCAACTCCCAATCAAAAGACATCCGGCGAACCGCCAGCGAAGAAATTCAAAGAATCCACATCTGATTTATACGAAAAAATCGAAAAATTACCGGAAGACATCACCATAATACCAGTAAATAATGTTCCATCTAAAGACAACACAGTACGTAAGAAAAACAACTCATTCTTTGACAAATTGAAAGAAAGGCTGTTGACTGAAACCGGCGAAGAAGGATCGCTAAAATGCAAAAATTGCGGTTTCGACAGTAAATGTCTGTCGGAACATTCCGTGCACGAGAAAAATTGCACCGCTCAGTCCAACCGCATTACGATGAATGCGGCGCTTCCAACGATGGGCTCCACTCGCTGCCAAAACTGTAGACATCGATGTAAATCTAGCGCGGACTTATACGTGCACATGCAGACTTGTGGAAAGAAAAATAGTGCCCCTAATAGGAGTGAAAATGCTATGGATCCCAAGCTTAATAACCAAGCGTCGACATCGCAAGCTGAAAAAGAAGCGGAGCCCCACCCTATGGAAAACGTAGTTTTTGTCTGGAATAACATCAGCCAAGACTCCAACAAATTCGAGAGACCTTTGGATATCAACATTAACGATGATTCAACTACTACTGAATTAAATAGACATTACGACACTGAAACCGTGGATGAAAGTGAGGGCATGAACTTATCACCAAACAGTTTGAGTCTTGGCAAAAACGTTTACAAATGTCCTGATTGTAAATTCTGGGCAGCAACAGCATCCAGGTTTCACGTTCATATTGTAGGTCACTTGAACAAAAAGCCTTTCGAGTGTTCGTTGTGTAAATACAAATCTAACTGGCGCTGGGacataacaaaacatataaagctGAAGTCTGCGAGAGACCCCGAGCATAATGAGGCCAAAGTTCTTATGACAGACGAAACTGGCAGAAGAAACTACAGCAAATACAATAAGTTCTTAGCAGTGCCAGTGATTAATGAAAATGGTGAGAACGAGTTCCACTACATAGATCCGAACACGTCTGTCGATGCGTCCATGGAAATGGATGAAACTTATAACGAGTCCTCTGACATGCAATTACCATATGAAGTGCAACCTCTCAACCTACAGACACAGCCTACTGACAAGTACAATATAATGGACGGCAGAAATCAAGACCCTAAAAAGCCTAAGAAGACATTGTGGAAATGCAAAAAATGTAATTACAAggATCCATCAAAGGAAGCCTTGTTGGAACATGTCAGACAACATTCGAAAGGAGGTGTGTTGGACGATTCTCCGCACAACAAGAAACTTGAAAACGCTCCTGATCCAGCGGATTTGGCGTACCGCTGTGGACACTGTAATCAGCTTTCGAATTGGAAACACGTCATtcagAGACACTGTCGTTTGAAGCACGACGGAATAATCAAAGTTATAACCACAGTGAAACTGAAACCGGATTTATCTCAAGTACCTGGAGGAGAAGGCGTTTACAGCGATCTCTGCACCAAGTGTCCTTTCAAGGCTAACGACAAGAAACAACTCCAAGAACATTTACAACAGCATCAGCCTTCGCCGGAATCTATCTTTAAATGTTATTTCTGCCCTTATTTTGTCAAAGACGAACAAGATTTGATCCAGCACCTTTTGTTACATGGAATAACCGATCCAGAGGATTATATTGCCAAAGCGATGGGTTGCAGATCTCCTTTACCGGACCGAATCCTTACCAACGCCGAAATACAACCCCCATCCGGTACTGCTACAAAACGTCACAAGTGTACTGAATGTCCTTATGAAACGAATAGTAAATCTCAATACATGTATCATGAACAATTCCATCGGCTTCCTGCAGACACCCCTTACAAATGTCCAGAATGTAATTACAGTGTTTCGAAGAGACACTTGCTTCACCAACATCTGAGAGTACACGGCATTCATCCGTCATCAGATCGCAAGAAATATGAATCAGAAGCTGAGTTAGAAGCAAACATCCCTTGCATAAACAAATCACCATTTGTATGGGTATCTGCAAGAAACGAATttcacaaaatgtacaagtgTCGCTATTGCTCTTACGTTAACTCTCAGCAATGTAAATTACCTAACCATGAGAAGATTCATTGTATGGAATTTGAGAACAGCGatgttattatatacaaatgCTTAGAATGTAAATTTACGTGTGACGACGCCGAAAAAAGCGCTGAACATTCCAAAAAGCATGGCCTATTGTATGGTCGCATCTATAGTTACGTAGAGGACGATATTCCCGACGAAGAACAAGTAGCAAAACTACGCAGAGTCATAGATCAAGAAAAAGCTTTGGAAGAATCTGCGAAAGAGGAAAGCGCTTCAACTGATGCATCTGAAAATAAACTTATGTATTATTGTCAGAAATGTCCAGCTAATTATTTCAATGAGAGCGAAATTAAAGCACACGAAAAGTACCATGATACTGCTTTAGAACACAAATGTAAAGTCTGTGAATATTCCGCTCCTGAAGAAACAGAATTGACTGCCCACATCACAGTGCATTCTGATAATTACCACATCAGAACAAATATGTACAAATTCGTCCACAACTATCACTCTCTTTATAAACCACCCCTTTTGGAATCGATCCGCAATCCAGATTCTCCAGATGTTATGTGGGTAGCGTTAGCCAACAAACCAATTGAATATACAGAAACAGTTCAAAAGAAATTTGAATCAAAACATACACCCAAACAATATCATTGCAAAGAATGTCCTGCCAAATTTTTCAAGAGCTCTGCGCTCTCCTATCACATGGGATTACATGGCGGAGAAGGTGAACATAAATGTAAGAAATGCAGTTATGCCGtcaaaaatataggtaatttaGCTAAACATGAAATGTTGCACGAAATGGAGAACAAGCCGCCCGGTCGCGATTATGATTCCGGTGAAGACATGGACTACAAAAATATACCACTCTCTGGCACTGATTTATTCCAAAGAAAGACGGAAGCTTTAAAAAGGGTAATGATCGACAAAGATAAACTAGTGAAACCTAATGATCACTTTCCGCCAGTACTCCAAGCCGACCCCCAGTTCGGTTATTTGATGCATGGCAATCCAGAATTTATATATCCTACATACCTGAAAAACGGTCGACAAAAAGAGAAAAGGTACAAGTGTCACAAGTGCCCATCCGCTTTTGAAAAAAGAGAACAGTACAAGATACATTTATCACTTCACGGCTCAAAACAAAGATATAAATGCGAATTATGTGACTACTCTGTAAAGTATTACGCTAATTATGTGCAGCATAtgagaaaacatcaaatgaatgatgaagctcaagcagaAAGGAAGAAGGGCGGCAATGGTTTCGCTGAACCAGATAATCAAGAAGACGTGAAACAGGATGACAGTGGGGATAATATCAAGTTAGCAATTAAAACAATGCCCAAAGGTGCACCTAAGACCGATTTTCAGCAATTCTCAATCAGAGACCAACAAACTTTGAGGCTCATGCAGCGTAGAAGATCCATGAATGGCGGAAAGGACGCCTGCTCCAACGAAACATCGCCAACTAAAGAACGCAAGCTGCACATGTGTCTTCTATGCCCATATACAAACCAACGCCAGGATGCTCTAAGCAATCACTATAGACGACACGACCCCGATATGAGCTCTCAAAATAGCACTATGTTCAACATTGGAAATCATAAATGCTCCTTCTGTGACTTAGTGGTTCTCCAATCACATTTTCTGCGTGAGCACTTGAAAACTCACTTTAGCTATCATAAAACTCTGACACCTGAATGTTTCGTAGCAAACGAAAATGTGACTTTTACAATCACTAAAgtggaagaagaaaaagaacCTCTTGATCTCAAACTGGATGTGaaaagcaaaattatttttgatgaagagaaactatttgttaatattaaaactgGTGAATTAGTTGTAGAATAG
Protein Sequence: MLQQMSSPLSAQLGEVTAIARPLEGRLCVDVLSEASSDAAEDFELPHCKIRRNYNCTKCTFYTQNPRAYLLHTRDVHFGRFKIYECPHCVYASQHQQKLIRHMKMVHGGSPLPSGSTLRVEMELPVRTETEHPASNNPAGNMERMEDLLEEIEECDDMIDEDGEDLPEHIDYGDVRSNFSGPKGKSRFFSCEKCNYVTHIKARYTKHVKYHSMPMIKCTMCDFRTPYKWNLDRHMKNHGGTGSFVCSKCTFTADIKQSLTVHEMNHHNPPVGQVGSRRRNRVGGSDLTAVDQMSALPKDEESSGDSHSSHSASETMGLQYAEREMVSCNSDSNDANSSHADLNRDGTNDASGQHSPNSGTDDPKSQKQSRKAPRPIPQLIPLNSSTPNQKTSGEPPAKKFKESTSDLYEKIEKLPEDITIIPVNNVPSKDNTVRKKNNSFFDKLKERLLTETGEEGSLKCKNCGFDSKCLSEHSVHEKNCTAQSNRITMNAALPTMGSTRCQNCRHRCKSSADLYVHMQTCGKKNSAPNRSENAMDPKLNNQASTSQAEKEAEPHPMENVVFVWNNISQDSNKFERPLDININDDSTTTELNRHYDTETVDESEGMNLSPNSLSLGKNVYKCPDCKFWAATASRFHVHIVGHLNKKPFECSLCKYKSNWRWDITKHIKLKSARDPEHNEAKVLMTDETGRRNYSKYNKFLAVPVINENGENEFHYIDPNTSVDASMEMDETYNESSDMQLPYEVQPLNLQTQPTDKYNIMDGRNQDPKKPKKTLWKCKKCNYKDPSKEALLEHVRQHSKGGVLDDSPHNKKLENAPDPADLAYRCGHCNQLSNWKHVIQRHCRLKHDGIIKVITTVKLKPDLSQVPGGEGVYSDLCTKCPFKANDKKQLQEHLQQHQPSPESIFKCYFCPYFVKDEQDLIQHLLLHGITDPEDYIAKAMGCRSPLPDRILTNAEIQPPSGTATKRHKCTECPYETNSKSQYMYHEQFHRLPADTPYKCPECNYSVSKRHLLHQHLRVHGIHPSSDRKKYESEAELEANIPCINKSPFVWVSARNEFHKMYKCRYCSYVNSQQCKLPNHEKIHCMEFENSDVIIYKCLECKFTCDDAEKSAEHSKKHGLLYGRIYSYVEDDIPDEEQVAKLRRVIDQEKALEESAKEESASTDASENKLMYYCQKCPANYFNESEIKAHEKYHDTALEHKCKVCEYSAPEETELTAHITVHSDNYHIRTNMYKFVHNYHSLYKPPLLESIRNPDSPDVMWVALANKPIEYTETVQKKFESKHTPKQYHCKECPAKFFKSSALSYHMGLHGGEGEHKCKKCSYAVKNIGNLAKHEMLHEMENKPPGRDYDSGEDMDYKNIPLSGTDLFQRKTEALKRVMIDKDKLVKPNDHFPPVLQADPQFGYLMHGNPEFIYPTYLKNGRQKEKRYKCHKCPSAFEKREQYKIHLSLHGSKQRYKCELCDYSVKYYANYVQHMRKHQMNDEAQAERKKGGNGFAEPDNQEDVKQDDSGDNIKLAIKTMPKGAPKTDFQQFSIRDQQTLRLMQRRRSMNGGKDACSNETSPTKERKLHMCLLCPYTNQRQDALSNHYRRHDPDMSSQNSTMFNIGNHKCSFCDLVVLQSHFLREHLKTHFSYHKTLTPECFVANENVTFTITKVEEEKEPLDLKLDVKSKIIFDEEKLFVNIKTGELVVE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00927143;
90% Identity: iTF_01208804;
80% Identity: -