Basic Information

Insect: Plagodis pulveraria
Gene Symbol: -
Assembly: GCA_963890685.1
Location: OY982976.1:5943227-5965039[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 33 0.02 3.3 10.0 0.3 1 23 6 28 6 28 0.97

2 33 0.00018 0.03 16.4 1.8 1 23 34 56 34 56 0.98

3 33 1.8 3.1e+02 3.8 0.1 1 23 273 295 273 295 0.96

4 33 1.5 2.5e+02 4.1 1.1 2 23 319 341 318 341 0.94

5 33 0.00059 0.098 14.8 1.9 1 23 362 384 362 384 0.98

6 33 0.0035 0.58 12.3 0.3 1 23 388 410 388 410 0.97

7 33 1.3 2.1e+02 4.3 0.2 2 14 417 429 416 430 0.90

8 33 0.23 39 6.6 0.8 3 23 469 490 467 490 0.97

9 33 0.016 2.7 10.3 0.1 1 23 561 583 561 583 0.94

10 33 0.18 30 6.9 2.7 2 23 588 610 587 610 0.93

11 33 0.054 8.9 8.6 0.6 1 23 738 760 738 760 0.96

12 33 0.068 11 8.3 6.6 3 23 766 787 764 787 0.97

13 33 1.4 2.4e+02 4.1 0.6 1 19 828 846 828 846 0.97

14 33 2.1 3.4e+02 3.6 0.1 2 23 874 896 873 896 0.92

15 33 0.005 0.84 11.8 0.2 1 23 917 939 917 939 0.98

16 33 0.00012 0.02 17.0 0.5 2 23 944 965 943 965 0.95

17 33 0.017 2.9 10.2 1.1 1 23 972 995 972 995 0.96

18 33 0.012 2 10.6 0.4 2 23 1001 1023 1000 1023 0.94

19 33 0.075 12 8.1 0.7 1 23 1029 1052 1029 1052 0.95

20 33 0.026 4.3 9.6 0.1 1 23 1058 1080 1058 1080 0.97

21 33 9.3e-06 0.0016 20.4 1.1 1 23 1086 1108 1086 1108 0.99

22 33 1.6 2.7e+02 3.9 0.2 3 23 1181 1201 1179 1201 0.95

23 33 0.0044 0.73 12.0 0.5 2 23 1228 1250 1227 1250 0.93

24 33 0.0062 1 11.6 1.8 1 23 1271 1293 1271 1293 0.96

25 33 0.0015 0.25 13.5 0.3 1 23 1297 1320 1297 1320 0.96

26 33 8.9 1.5e+03 1.6 0.2 1 19 1361 1379 1361 1384 0.77

27 33 0.52 87 5.5 0.1 2 23 1408 1430 1407 1430 0.93

28 33 0.0034 0.56 12.4 0.4 1 23 1451 1473 1451 1473 0.96

29 33 0.042 7.1 8.9 1.0 2 23 1478 1499 1477 1499 0.91

30 33 0.0035 0.58 12.4 2.0 1 23 1506 1529 1506 1529 0.97

31 33 0.53 89 5.5 4.6 1 23 1534 1557 1534 1557 0.97

32 33 0.042 6.9 9.0 2.5 1 23 1563 1586 1563 1586 0.96

33 33 0.00027 0.045 15.8 2.8 1 23 1592 1614 1592 1614 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	33	0.02	3.3	10.0	0.3	1	23	6	28	6	28	0.97
2	33	0.00018	0.03	16.4	1.8	1	23	34	56	34	56	0.98
3	33	1.8	3.1e+02	3.8	0.1	1	23	273	295	273	295	0.96
4	33	1.5	2.5e+02	4.1	1.1	2	23	319	341	318	341	0.94
5	33	0.00059	0.098	14.8	1.9	1	23	362	384	362	384	0.98
6	33	0.0035	0.58	12.3	0.3	1	23	388	410	388	410	0.97
7	33	1.3	2.1e+02	4.3	0.2	2	14	417	429	416	430	0.90
8	33	0.23	39	6.6	0.8	3	23	469	490	467	490	0.97
9	33	0.016	2.7	10.3	0.1	1	23	561	583	561	583	0.94
10	33	0.18	30	6.9	2.7	2	23	588	610	587	610	0.93
11	33	0.054	8.9	8.6	0.6	1	23	738	760	738	760	0.96
12	33	0.068	11	8.3	6.6	3	23	766	787	764	787	0.97
13	33	1.4	2.4e+02	4.1	0.6	1	19	828	846	828	846	0.97
14	33	2.1	3.4e+02	3.6	0.1	2	23	874	896	873	896	0.92
15	33	0.005	0.84	11.8	0.2	1	23	917	939	917	939	0.98
16	33	0.00012	0.02	17.0	0.5	2	23	944	965	943	965	0.95
17	33	0.017	2.9	10.2	1.1	1	23	972	995	972	995	0.96
18	33	0.012	2	10.6	0.4	2	23	1001	1023	1000	1023	0.94
19	33	0.075	12	8.1	0.7	1	23	1029	1052	1029	1052	0.95
20	33	0.026	4.3	9.6	0.1	1	23	1058	1080	1058	1080	0.97
21	33	9.3e-06	0.0016	20.4	1.1	1	23	1086	1108	1086	1108	0.99
22	33	1.6	2.7e+02	3.9	0.2	3	23	1181	1201	1179	1201	0.95
23	33	0.0044	0.73	12.0	0.5	2	23	1228	1250	1227	1250	0.93
24	33	0.0062	1	11.6	1.8	1	23	1271	1293	1271	1293	0.96
25	33	0.0015	0.25	13.5	0.3	1	23	1297	1320	1297	1320	0.96
26	33	8.9	1.5e+03	1.6	0.2	1	19	1361	1379	1361	1384	0.77
27	33	0.52	87	5.5	0.1	2	23	1408	1430	1407	1430	0.93
28	33	0.0034	0.56	12.4	0.4	1	23	1451	1473	1451	1473	0.96
29	33	0.042	7.1	8.9	1.0	2	23	1478	1499	1477	1499	0.91
30	33	0.0035	0.58	12.4	2.0	1	23	1506	1529	1506	1529	0.97
31	33	0.53	89	5.5	4.6	1	23	1534	1557	1534	1557	0.97
32	33	0.042	6.9	9.0	2.5	1	23	1563	1586	1563	1586	0.96
33	33	0.00027	0.045	15.8	2.8	1	23	1592	1614	1592	1614	0.98

Sequence Information

Coding Sequence: ATGAAAGAGAAATTATTTGAGTGCGCCGTTTGTAAAAATTGGTTTATGACTAATGATGATCTAAAAAATCATATGATAAGGCACGGCGGAGAGCGAAAACATCAGTGCCAAGTGTGTAAGAAAGGCTACGCGAGGATACGCACATTGAAGGAACACATGAGAATACATAATAACGATAGAAGATTCGTTTGCGCGCACTGTAATAGATCCATCGACTTAAGGTGGAGGCCGAAACTGGGTGACTTACACGACCACCGAGACAACGCGGCCATACTCTTGGAGTGTTCCAACGTCTGTCCTTTCAAATTCCATCGAAACGTATTCATTTGTGCGTTCTGCCCATTTACTTCTCCAGATTTCGGTCCTCTAAAAACCCATTCAGATAATCACCAGGAAAGAATTAAAGCGCTTTACGATGTTAGAGCCGACGCAATATTCAAAGCAGACGTATCTGATCTTAAATGTAAACTATGTCAGAAAAgacCAATTGCTATAACTTGGAGGCCGAAACTGGGCGACTTTCGAGACCATCGCGACAACGCGGCCAAAATCTTGGAGTATTCAAACGTGTGTCCGTTcaaattccataaaaacgtatTCGGTTGTGCCTACTGCCAGTTCACTTCGCCAGATTTCGGCCCCGTTATGAAACATACTAAACAACATCGGGATAGGGTTAATGCTCTGCGATCCCTCGCCATAAAATGGATACAGAGACGAAACAATTTGATGACGGGCTTTGGTGACTCACGAGACAATGCGGCTATTATCTTGGAGTGTTCCAACATGTGTCCATTCAAATTCAAGAAAAACGTATTTGAATGTGCTTACTGTCCGTTCACGTCCCCAGAATTCGGCGCTATCAAAAAACATACGGAAATGCATCAGGACAGAGCTAAAGCTGTTCAGCTAATGAGGTCCAGCATGGTGTGCAAAGCAGACATAACGGATCTAAGATGTGAACTCTGTCAGGCAAGCATGAAAAACATATCAACGCTGTGTGAACATCTGAATGAAACACACCAGAAGTTCATGAAAAAAGAATATGAGCCTGGCGTTGTACCATACTTGATAACTAAAGATTTCACATGCGCAGACTGTGGCCTCAATTTCGATcgatttgtgaaattaaatcaaCACATGAATCATCACTATCCTAATTTCATCTGTTCTGACTGCGGCCAGGGTTTCGCTAGTGCGCAAAGAATGCAAAATCATTATTCATCACATCAAAAGAAGGCACAGGTTAAATGCTCTAAATGTGACGAAATCTTTCCTTCAGCATCTCAACCTGGAAAATGGAGGCCGTCAATCGGAGACTATCGCGACGCACGTGACAATGCAGCGATAATCCTGGAGTGTTCCAACATCTCTCCCTTTAAGTGGCGTCGCAATTCTTTCGGTTGCCCCTACTGTTCATATAATTCACCACATTTTGAACTctataaaaatcatattatgtCTGATCATCCGGACAGATCAAACCGAATCGAAATCCTCCGCAACTCGCGTCGTAACGATCCTATCAAAGCAGATGTGACGAATCTAACATGTGATCTCTGTCAAGAAAATATCGACAACATAGAAATACTAATGGACCATCTTCTCGAACAACACAACAAACCTATTATTACAGATTATAGTTCTGGCATCGTCGCATATCTTTTATCAAACAATAGTTTCATTTGCCCTTACTGTGCTATTAATTTTGATcgatttaaaacattaaacgCCCATGTTGATGAGCACACCCTTCAGTGTGTTTGCACTCAGTGTGGCCAGCTATTCTCAGGTGCAAAGAAACTTGGTAGACATATTCACCAATACCACGCAGAGACTCAAAAATACGATGACTATGGAGATTCTAGACGTAACGCGTCAATTATTTTAGAATGTTGTAACGTGTGTCCCTTCAAATGGTACCGAAACGCGTACGGGTGTCCCTGCTGCGCTTATACCACCCCCAATTTTATAGATCTCAAAAATCATATATCAGGAAACCATCCCACGAAATCCGACAGAAGCAGGATTCTCCGTAACTCGCGACCTGGTGACATAGTCAAAATAGATGTTACAAATTTGCAATGCGATCTGTGCCAAGAAAAAATCAAGGATATTGCCACAATAATGAATCATCTGGTCGAAAAACACGATAAACCCATAGTTATGAATTACGGTTCGGGTGTTATGTCATTTCTGTTGGAGGGAGGTTTTGTATGCGTCTACTGTAATCAATCTTTTGATGGTTTTAATTTCTTAAACTCTCATGTGAATGATCACAACCTTAGTTGTGGATGCTCCGAATGCggacaacatttttttaatgaagataGACTCCGAAAACATATCATGAGATGTCATGAAAAACCCCGTAGTACCAAACTGAAGTCTAAATTCGGCTACTATGATGATGCTAGACATAACGCCGCAATTATCTTAGATTATTCAAATATTACCCCTTTTAAATGGTACCGAAACGTATTTAGATGTGCTTATTGTGAATTTACTTCGGTGGATTTTGGTTCACTCAAGACTCATGATCACCCTACATGCCCAAAAACTGAAGCCCTGCGCAACTCTCGTCCATCTGAGGTTCTCAAAGCAGACGTTACAGATCTCAAATGCGAGCTCTGTGACCAAGCAATCCAGGATTTGAAAACTTTGGTTGATCACTTGAGTGAAACTCACggacttaatttaaaaaaacagtatgGTTTTGGGATCGAGCCCTTCATGGTACGTGAAGGATTCAAATGTGCAGATTGCGGGCAACAATTTGACGGGTTTATAAAGTTAAGCCAGCATATCAATGTACATTACCTCGATTGCGTCTGTCCTGAATGCGGTCAGGCTTTTTCCAAGCCCGAAAAGTTGAGAAGCCATTTTGAAGTACACAAAAGAAAAACTGGTCGCTATAAATGCTCGGAGTGTGGAGCTCGATTTGACTCAAGATACAAAAAAGATCTACATCTAAAGTCAGAGCATAATATTCTCGTCAACAAATGTCCATATTGTGATGAGTCCTTTGAATCTTATCCGCAAAGGTTGCAACATTTGAACGAGAAGCATGGCAAAAAGACTGATTTTCCGTGCCGTATATGCCCGGCAGTTTTTAAAACGGCTACTAAACGATCTCTACATACTAAATCATTTCATTTTAAAGACAATAAATTTCCTTGCACCATTTGTGAATATAGGTCCGCAAATTTAATGGGGCTGAGAATGCATATGGTAAAACACAATAAAGAGAAAAAGTATAAATGTGAAGTCTGCCCAAAAGCATACCGTCGTAGGAAGGCGTTCACTCTACACATGCAAAGTCATGACGAGAAAAAGAGTTGGTCTCTTCTATCAAGTCCTTTATCGGTTGCGTTTACTTACGTTAGTAATAGAACTGATTGTgcgtttttctttttgtttgtaGAACCTGGAAAAAGGAGGCTGAAAGTCGGGGAGTATAACGACGCGCGAGACAATGCAGCCATAATACTAGAGTTTTCCAACGTTTGTCCTTTTAAGTGGTATAAAAACGTTTTCGGTTGCCCGTACTGTACGTTCACATCACCGGATTTCGTTTCTATTAAAAACCATATGGTTGAACATCCTGTGAAATCAGATAGAGTCCAGACTTTACACAACTCGCGACCTGGCGACACTGTTAAAACAGATGTCACAAATCTAAAATGCGAGCTGTGTGACAAACACTTTGAGAATGTAGAAACTCTAATAGATCACCTAATAGAAAAACACGATAAGCCATTAGTGAAAAAACACGGTCCGGGTATCGTGTCCTACATGTTAGATAATGGATTCACATGCGGGCATTGTAACGAATCTTTCGAACGTTTCTTGACATTGAACTCGCATGTGATTCAGCACAAAACTAATTTTGCCTGTTCTCAATGTGGCAAATATATGTCTACCCCCGAAGGCCTTAGAAAACATATTCTTAGGCGTCACGTGAAAACTCCTCGGATAGATTTTCGACCAAAATTGAGTGATTACAACGATGCTCGACATAATGCTTCTGCAATTCTCGAATGTTCTAACGTTTGTCCTTTTAAATGGCACCGAAACGTATTTAGATGTGCCTATTGTGATTTTACTTCGGCTGATTTTGCTCCCGTCAGAGTACACGCTTTCAACATTCATCCGAAAAAACTTGAAGCCCTCCACTACTCCCGTCCAACAGAAATATTCAAGGCAGACATTACAGACCTCAAATGCGAACTGTGTGACCTGCCGATAAAagatatgaaattattaatgaaCCATTTAATAGAAAGTCACGGAAAGTCCATCAAAAAAGATTACGGCGCCGGAATTGTACCATTTCTGTTATGCGACGGTTTCACATGCGCCGACTGCGGCCAACAGTTCGATAGATTCATGAAGTTAAACATCCACGTGAATGACCATTACCCTAATTGTATTTGCTCCCAATGCGGGCAGGCTTTTTCTAGCGTAAACAGGTTAAGAGCTCACTCTGAGCAGCATAAAAAGAAAGTTGTCCAGTTTAAGTGCTCCCCTTGCGGCGAGGTGTTTACCTCAAGATTCTACAAACAAAAGCACATGGAGACCAAACACGATATCCTTCCCCATAAATGTCCGTATTGCAGTGACGCGTTCAAATCGTACGCGCACAGGTTACAgcatttaaataagtatcacGATAAAAAGATAGAGTTCCCATGTCGATTGTGCTCAACAATATTTAAGACAGCTTCGAAACGCGCCGATCACATGAGACATTTTCACCTGAGGGATAAACAGTATTCGTGTACAGTTTGCGACTACATGTGCACTAGTGTTACTCAGTTGAAAAAACATATGGCGAAGCatgtgaaaatataa
Protein Sequence: MKEKLFECAVCKNWFMTNDDLKNHMIRHGGERKHQCQVCKKGYARIRTLKEHMRIHNNDRRFVCAHCNRSIDLRWRPKLGDLHDHRDNAAILLECSNVCPFKFHRNVFICAFCPFTSPDFGPLKTHSDNHQERIKALYDVRADAIFKADVSDLKCKLCQKRPIAITWRPKLGDFRDHRDNAAKILEYSNVCPFKFHKNVFGCAYCQFTSPDFGPVMKHTKQHRDRVNALRSLAIKWIQRRNNLMTGFGDSRDNAAIILECSNMCPFKFKKNVFECAYCPFTSPEFGAIKKHTEMHQDRAKAVQLMRSSMVCKADITDLRCELCQASMKNISTLCEHLNETHQKFMKKEYEPGVVPYLITKDFTCADCGLNFDRFVKLNQHMNHHYPNFICSDCGQGFASAQRMQNHYSSHQKKAQVKCSKCDEIFPSASQPGKWRPSIGDYRDARDNAAIILECSNISPFKWRRNSFGCPYCSYNSPHFELYKNHIMSDHPDRSNRIEILRNSRRNDPIKADVTNLTCDLCQENIDNIEILMDHLLEQHNKPIITDYSSGIVAYLLSNNSFICPYCAINFDRFKTLNAHVDEHTLQCVCTQCGQLFSGAKKLGRHIHQYHAETQKYDDYGDSRRNASIILECCNVCPFKWYRNAYGCPCCAYTTPNFIDLKNHISGNHPTKSDRSRILRNSRPGDIVKIDVTNLQCDLCQEKIKDIATIMNHLVEKHDKPIVMNYGSGVMSFLLEGGFVCVYCNQSFDGFNFLNSHVNDHNLSCGCSECGQHFFNEDRLRKHIMRCHEKPRSTKLKSKFGYYDDARHNAAIILDYSNITPFKWYRNVFRCAYCEFTSVDFGSLKTHDHPTCPKTEALRNSRPSEVLKADVTDLKCELCDQAIQDLKTLVDHLSETHGLNLKKQYGFGIEPFMVREGFKCADCGQQFDGFIKLSQHINVHYLDCVCPECGQAFSKPEKLRSHFEVHKRKTGRYKCSECGARFDSRYKKDLHLKSEHNILVNKCPYCDESFESYPQRLQHLNEKHGKKTDFPCRICPAVFKTATKRSLHTKSFHFKDNKFPCTICEYRSANLMGLRMHMVKHNKEKKYKCEVCPKAYRRRKAFTLHMQSHDEKKSWSLLSSPLSVAFTYVSNRTDCAFFFLFVEPGKRRLKVGEYNDARDNAAIILEFSNVCPFKWYKNVFGCPYCTFTSPDFVSIKNHMVEHPVKSDRVQTLHNSRPGDTVKTDVTNLKCELCDKHFENVETLIDHLIEKHDKPLVKKHGPGIVSYMLDNGFTCGHCNESFERFLTLNSHVIQHKTNFACSQCGKYMSTPEGLRKHILRRHVKTPRIDFRPKLSDYNDARHNASAILECSNVCPFKWHRNVFRCAYCDFTSADFAPVRVHAFNIHPKKLEALHYSRPTEIFKADITDLKCELCDLPIKDMKLLMNHLIESHGKSIKKDYGAGIVPFLLCDGFTCADCGQQFDRFMKLNIHVNDHYPNCICSQCGQAFSSVNRLRAHSEQHKKKVVQFKCSPCGEVFTSRFYKQKHMETKHDILPHKCPYCSDAFKSYAHRLQHLNKYHDKKIEFPCRLCSTIFKTASKRADHMRHFHLRDKQYSCTVCDYMCTSVTQLKKHMAKHVKI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01208521;
90% Identity: -
80% Identity: -