Ppul034387.2
Basic Information
- Insect
- Plagodis pulveraria
- Gene Symbol
- -
- Assembly
- GCA_963890685.1
- Location
- OY982966.1:18913610-18916051[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.7e-08 1.1e-05 26.7 0.0 5 41 1 37 1 41 0.90 2 2 9.3 5.9e+03 -1.3 0.2 29 43 412 426 412 428 0.81
Sequence Information
- Coding Sequence
- ATGCAGTCTGCTATAGCTGCAGTACGAGAAGGAAGATTTAAAATTAGGGAAGCTAGTCGACATTTTAGCGTACCCCATAGTActctgataaataaattaaagggTAGAGTTCCAGAAGTGAGGAAAATGGGACGCGACACGTATTTTACAGCAAATGAAGAAGAtcttttagtaaaatatatcaTTGCCAATGCTAAAAAGGGTATACCTATAAAAAGACAAACATTATTAGAAACAgtgaaaaaaattttagatgacGATGAGAGAGTGACGCCgttcaaaaataatttgccAGGCAAAAAATGGGTTACTTTATTTTACCAACGACACCCTGAAATCACTGAAAAGTTGGCTGAAGGGATTTCCACTGGACGCGCCGCTGTTTCTGTAAAGGACATTCAAAGCTGGCACGAATCCCTTAAAGTCTATTTGACACAGGAGGACGCCTTAGACATACTTGAAGACCCTAAACGCATTTTCAATGCAGATGAGTCGGGGTTTCAAACATGCCCAGAATCAGGCAAAGTCTTAGGACCGGTAGGAATGaaaaatttttatcaaattaaatcTGGAAAAGAGAAGGAACAACTGATCGTCATGGTAACCATCAATGCTGCAGGTCAAGTTGTCACACCAATGATTGTTTACCCACTAGTGCGCATATCAAAAGAGATATCATCAAATGTGCCAGAGGATTGGGGAATCGGCAAATCGCCAAAAGGTTGGATGACTGGACCATTATACTACGAATACATCGCGAATATCTTTGATCCATGGCCAGCGGACGTATCCGTATTCAAATGCATGAAAAGTGGTTGGAAAAACACAGTGTTggagtacaaaaacaaaaccgGAAATCGACAGATTACCCGTGCTGGATTCGCACCTTTGCTGGCTAAAGTTTTTGAGGAGAAAGTGACTTCAGAAGTCATTTCGAATGGGTTCAAGAAATGTGGAATTTATCCCTTTGATGTGACTGCCATAGATATGACGCGATGCATGGATAATGAGACTCGAAGAACTGCGCCTGTGTCTCCACCCCCACGAGACATAGGAGTAAAAACTCTGTTGCTATTTGAGTCCTTTATGAGACGAGGCCGCGTAGAACAGTTTAGGCGTAGCAATGAAACCTGGGATGGAGATGAGACTGCGAAGGAGTTATTCTATGTCTGGAAAAAGTTTAGGCAGCACTGTTTGAACGTTGCTCCCAAGTACAGTGCAGAATATGTCCAATCTACATCGTCACTGCATAAGCATTATTCTGAAACATCTCCGCTCTCGAAAGAACCAGACCTTCCAGTAGAGTCTGAAACTTCCACCAGGTGTAGTACTCCGGTCTCCTTGGCACCAGATGCCTCTCAAATATTGGTAACGCCCGCCAGATCTTGTACTCTTCCAGTAGCGAAGGTGCTAGATTTTTCACAAATATTGGAAGCGGTCGCCAGAACCAGCTCTTCATCTATAGTCACCGCCGCCATATCTTGTACTTCTCCAACCACGAAGGCACCCGAATCGCACTTTGTAAGCGATGCTACAGAACTCCAAACCGTAAAATTTGCAAGCCCATCGACGTCGGAAAAGCATTCCTTAAATGATAACTTATTAGTGTCGAAGAAACAAAAAGAGATTAGTCCTGCTTTTGGACACCACATTATTTGGCCCTCAGATTCAcccattaaacattttaaaaaagaaCGTCTACCATTCGCAACCACATCCAAAAAGTGGCAAGATTACTGTTTGAGTAAGGAAAGTGACAAAGACGAAAAGAACAGAAAAGCCGAAATTAGGAAACGTGTACGGGAggaaaacaaagtaaaaaaatgtatgcaagcacctaaaaaaacaaaaagagcAGCTAGTAaggaaattaacaaaaaaactaaaataagaatcatcagAAGCGATACCAGTAGTAGTGATAGTGAAGCAAGGTCAGATGAAGTACCACAGGACAACAGCGAACGAGTCATAACTGATGAAGAAAATGACAACAGAGCAGATGAAAAAGAGAGTGCTCGTGTAaattcaggaggttttgacgtTGGAGATTTTGTGATATTTGATTACGGTGGTACACATTTTGTCGGACAAATCAAGTCAATAAATGAAGAAGGTGCATTGATCCAATCAATGCAAAAGTCACTCAAAAATTGGAAATGGCCGGTTAAAGAGGACTTAGGCTTATACGGAATTGGTGATATAAAAGAGAAAATTAGAGAACCAAAACTAATACACCGAAAAAGGGGAATTTACCACGTATCCGGATTTGAAAAGTATACagattatattatttag
- Protein Sequence
- MQSAIAAVREGRFKIREASRHFSVPHSTLINKLKGRVPEVRKMGRDTYFTANEEDLLVKYIIANAKKGIPIKRQTLLETVKKILDDDERVTPFKNNLPGKKWVTLFYQRHPEITEKLAEGISTGRAAVSVKDIQSWHESLKVYLTQEDALDILEDPKRIFNADESGFQTCPESGKVLGPVGMKNFYQIKSGKEKEQLIVMVTINAAGQVVTPMIVYPLVRISKEISSNVPEDWGIGKSPKGWMTGPLYYEYIANIFDPWPADVSVFKCMKSGWKNTVLEYKNKTGNRQITRAGFAPLLAKVFEEKVTSEVISNGFKKCGIYPFDVTAIDMTRCMDNETRRTAPVSPPPRDIGVKTLLLFESFMRRGRVEQFRRSNETWDGDETAKELFYVWKKFRQHCLNVAPKYSAEYVQSTSSLHKHYSETSPLSKEPDLPVESETSTRCSTPVSLAPDASQILVTPARSCTLPVAKVLDFSQILEAVARTSSSSIVTAAISCTSPTTKAPESHFVSDATELQTVKFASPSTSEKHSLNDNLLVSKKQKEISPAFGHHIIWPSDSPIKHFKKERLPFATTSKKWQDYCLSKESDKDEKNRKAEIRKRVREENKVKKCMQAPKKTKRAASKEINKKTKIRIIRSDTSSSDSEARSDEVPQDNSERVITDEENDNRADEKESARVNSGGFDVGDFVIFDYGGTHFVGQIKSINEEGALIQSMQKSLKNWKWPVKEDLGLYGIGDIKEKIREPKLIHRKRGIYHVSGFEKYTDYII
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01209184; iTF_01209174; iTF_01209176;
- 90% Identity
- iTF_01209176; iTF_01209174; iTF_01209184;
- 80% Identity
- -