Ppul001408.1
Basic Information
- Insect
- Plagodis pulveraria
- Gene Symbol
- ttk
- Assembly
- GCA_963890685.1
- Location
- OY982949.1:19779751-19790878[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.6e-15 9.9e-13 49.2 0.0 1 42 336 378 336 381 0.94
Sequence Information
- Coding Sequence
- ATGTCGCAGCAATACAGTCTGCGATGGAACAACCACCAGCCGAACTTCATATCAATGTTCACAACACTCCTGAACACGCAGACCCTAGTGGATGTTACCCTTGCAGCTGAAGGCAAACATCTTCAGGCTCACAAGGTGGTCTTGTCTGCCTGCAGCACTTATTTTCAGGCACTGTTCGTCGATAACCCGTCACGACACCCTATTGTGATCCTGAAAGATGTGACCTTTGCCGACCTGCGCACTATGGTTGACTTCATGTACTATGGCGAAGTCAACGTGACTGAGGAGCAGTTACCGCAGGTGCTGGACACAGCGAAACTGCTCAAGATTAAGGGGCTGACAGAGATGCCCGATTCGACATCTCTAACGCGGGCTCAGGGAGGCCCTGCGGCTGAGTTCCAGCCGCCAGCGGACCCCGAACCTCCGCGCATGGCTGCTTCACCTGCCACATCGCCCTCTATCAAACGAAGGAGACGCAGAAAAAGTTCGACCGGTTCTGCTTCACTGAACTTGGTTGGAGACGAAGCACGGGGTGAAGATAACCAGACAGTGGAGCTAGTGAGAGATGGCATAACGCTCAGCAGCGTGCCGCAGCGCCGGAGAGATTTCCATGATGAACGCCGTCAAGACTCATCACAGCAGACATCGGACAACCCACATAACCTGAATATGGACCCGCTTGAAGTGGACAACCCGCCAGGGTTGACTCAAGGAGGCCAGTGGAGTATGATGGAGCACGCATACCCGCGGTACAGTAACGCGTGTGGACTGGGAGGAGGCGGGGGGGGCGGGGGTGGGGGGCTCCACGGCGATGGTGCGCTCTACATGAACAACGTGTTGAATCCGCACATGGAAGGTGAACTGAGTGAATACGCGCACGCGCTGGGCGGTGCCGGTGGAGTGGCGCACCCCTCGCCCGGCCCCAGCTGTGGCGTGGAGCCACCGCTCTCGCAGGAGCCGACGCCAACACAACATCCCAAGCGCCGCCGCACTACCAACCCGCAATCAGAAGAGAACTTCCAACGAGCGCTCGAAGCAGTGCGCTTCGGCGGCATTGGCTTCTGTAAGGCGGCTCGTATGTTCGGCGTCAACAACCGGACGCTGTGGCTCGAGTACAAGAAGAAAGGCTACCCGAACAACCGGCCGAGCATCAAGAGCCGTATCAAGCGTGAGCACACCACACCGCCGCCCGAATACAAGGGGGTTGCTACGTCGGCTGAGCAGCAGATGGCGGTTATATGTCCGCCGCACCCCGTGTCCGTGGGGTTCATCGAGTCGCGGCCACTTGACTTCCCACTGCAGGGTATGCCGCACGGCTCGCCGCTCAACATCCTCGGCGTAAACTTCAACTCGATGCAATAA
- Protein Sequence
- MSQQYSLRWNNHQPNFISMFTTLLNTQTLVDVTLAAEGKHLQAHKVVLSACSTYFQALFVDNPSRHPIVILKDVTFADLRTMVDFMYYGEVNVTEEQLPQVLDTAKLLKIKGLTEMPDSTSLTRAQGGPAAEFQPPADPEPPRMAASPATSPSIKRRRRRKSSTGSASLNLVGDEARGEDNQTVELVRDGITLSSVPQRRRDFHDERRQDSSQQTSDNPHNLNMDPLEVDNPPGLTQGGQWSMMEHAYPRYSNACGLGGGGGGGGGGLHGDGALYMNNVLNPHMEGELSEYAHALGGAGGVAHPSPGPSCGVEPPLSQEPTPTQHPKRRRTTNPQSEENFQRALEAVRFGGIGFCKAARMFGVNNRTLWLEYKKKGYPNNRPSIKSRIKREHTTPPPEYKGVATSAEQQMAVICPPHPVSVGFIESRPLDFPLQGMPHGSPLNILGVNFNSMQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00913529;
- 90% Identity
- iTF_01208038;
- 80% Identity
- iTF_01209426;