Pdol009322.1
Basic Information
- Insect
- Plagodis dolabraria
- Gene Symbol
- dmd-4
- Assembly
- GCA_963854805.1
- Location
- OY978443.1:17303544-17316761[+]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1e-24 1.6e-20 74.5 11.2 1 47 7 53 7 53 0.98 2 2 4 6.3e+04 -5.1 7.1 3 11 284 292 277 292 0.90
Sequence Information
- Coding Sequence
- ATGAATAGTGGAAGAGCGCGGGTGCCCAAGTGCGCGCGGTGTCGTAACCATGGCCTGATCTCCAGTCTTCGAGGTCATAAGAAAGCCTGTGCTTACCGACACTGCCAGTGCCCCAAATGTGGGCTCATCAAGGAAAGGCAACGTATTATGGCTGCTCAGGTCGCACTAAAGCGCCAGCAAGCCGCAGAAGACAAAATAGCCTTACATCTGGCATCGGTGGAGAGTGGCACGGCCTTAGATGCACTGCCACCAGGCCGAATATACGGCATGCGGGTAACGGAGCCGTGCCCCAGCCCTGGCCCGGAACCAGATTCGGCAGCTGATGATCACGCCCCAATCCACATCGACAGTGAAACGAGCGATTCGCTACCAGATTGCTGCAGTGCGTCTCCAGATTCCGCTGGCAACACATCAGCTTCCTCTTTAcgTATTGGACCGGAAGTGAGTGCGGAAGACGGCACAGTCAGCACGGCAGGTCTCGAAATGTTGCGAAAGCTGTTCCCCGGCAAGAAACGCTCCGTATTGGAGCTCGTTCTACGCCGATGTAATCACGACTTGCTTCGAGCTGTTGAGCACTTTAATGCAACACACGATCCCAGAGACAAAATCCCTGGCAGTAGCTCTACTGGGTCAAGCTTTGAAGCATCAGTGTCAAGCTCTGAAGAAGTAGAGTCCCGCTGGTCAGCGTTCCGCCCGGTCGGACCAAGAGCTCCTTTCCTCCCCGCTTTAGTCATGGGCCGAGTGTGCGGGTCAGACTGGCTTGTGCCTTTGCCCACGCTTCCAGCGTTATCAACTCCTTTGTTTGCGCTTCAACATCACCCACCACCGCCGCAATGTAACCCTTGTGCTCCTGACTGCCGACAGTGCAATCACCATTAG
- Protein Sequence
- MNSGRARVPKCARCRNHGLISSLRGHKKACAYRHCQCPKCGLIKERQRIMAAQVALKRQQAAEDKIALHLASVESGTALDALPPGRIYGMRVTEPCPSPGPEPDSAADDHAPIHIDSETSDSLPDCCSASPDSAGNTSASSLRIGPEVSAEDGTVSTAGLEMLRKLFPGKKRSVLELVLRRCNHDLLRAVEHFNATHDPRDKIPGSSSTGSSFEASVSSSEEVESRWSAFRPVGPRAPFLPALVMGRVCGSDWLVPLPTLPALSTPLFALQHHPPPPQCNPCAPDCRQCNHH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00662271;
- 90% Identity
- iTF_00818387;
- 80% Identity
- -