Pdol021155.3
Basic Information
- Insect
- Plagodis dolabraria
- Gene Symbol
- dl
- Assembly
- GCA_963854805.1
- Location
- OY978449.1:2042010-2057649[-]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-14 7.5e-11 44.1 0.2 1 58 242 299 242 304 0.95 2 2 1.2e-49 6.8e-46 158.1 0.0 10 169 390 555 384 555 0.94
Sequence Information
- Coding Sequence
- ATGATTGCCAACACGGTTTCAGAAAAGGGCGGTCAACCGCTACAAATCACATCAACTATTTTAATTACGTCACTGCTGGGACGGTTCAGCTTGCAGGTTGACGTAGCATATTTTGCCTTTAAAAAAGCATTTGACCAAGTAGACAACGACATCTTGTTAGGCAAATGTGCTTCTATAGTTTTTAATCCCAAGCTCCTGAGCCTCTTCGCCAGCTATCTTCAAAATCGCCTACAGTATGTTCAGTTCCTAAAATACAAATCACCGCAATATTATACCCGATCTGGCGTGAGTCAAGGCTCGACGCTAGGACCAACCCAATTTCTCATAATGATAAATGATCTGCCGAAGTCTGTCAGCACCGCACGATGTCTCGTTTTTGTGACGATTCAATTATTTACTACCATAGCTGACAGTTCTAGTTGTGATTCCTTACAAGCAGATCAGGTGGCTAGCTGGAGCAATAGAAATCGACTCCATTTCAACTCCAACGAGTGTAAAGTGTTAACAATTACACGGAAACTTACATCATTTTACCACGAATATCAGCTGGAGGACACTAGACTGGAACGTGTCAGTGATATGCTAGATTTGGGTTTGAACGTAGATTCACAATTTAATTTCAGGAATCATATAACCCAGATATtttcttattttaatttatggtACCATAATAATTCGCCGCCGGTGTCAATGTCACAACCGAAGGCAAAGGACCTACCGACAGTTACGATCGTCGAGGAACCAGCTGCCGAAAAGCGCAGGTTCCGGTATAAATGCGAATGCAGATCAGTTCGTGCCATCCCTGAAGTGAACAGCTTCCGGGGCAACAACACCGGCCCAACCATTACGATAAACAATCATATCGGACAGGTCAACATCGTCGCCTCATGTGGGCGGTACAAATCTTTGCCTGGGGGGAGTTCTTCGGCCGAAGTATTGCGGACATCTGGCCTAGCACTCTGCTTTTCAGCTGGAGAATATGCGTGCCCAGTGTGGCACCGATCCTCCCATGCCAAAGAAGTAGATGTTGCCCTCAATGAAACATGTAGGAAAATTACCGGCTGCCTTAAGCTTACTCCTCCTAACATGCTGTACCCCATAGCAGGAATAGCACCACCTATAGTGCGCCGTAACATAATTTGCTCTACGGAGAAACTAAAGCAAGAACAAGATTTTTGGTTCCGGTATAAATGTGTGTGCAAATCAGCTCAAGCCATCCCTGGAGTCAACAGCCTCAGGGGTAACAAAACGTACCCAACCATTAGGATAAACAATTATACCGGACTGGTCACCATCGTTGTGTCATGTGTCACCAAGGAGCATCCATACAAGCCCCATCCCCACAACCTTGTGGGTCGGTTAGGCCAAGAGGGGTTCAAACAAGGCGTGTTCGCAATTCGGACTCAGGTGACGAGAGATGCTAATGAGTATCAGTTCACGAACCTCGGTGTTCAACGTGTGAAGCGGACTCAAATCGAGACGTCCTTAAAGAACCGAGCAAAATTTAACATTGACCCTTTCAAGACTGGTTTCGAGCACGCCAAAGACTGGAAGACCATGAACCTTAAAGCTATCCGGTTGGCCTTCCAAGTGTTCCTCCACGATGAAGGTGGAGATAAACTAACCCCGCTGAATCCTGTCGTGTCAAATGTAGTATATGACAAGAACCATATTACCTAA
- Protein Sequence
- MIANTVSEKGGQPLQITSTILITSLLGRFSLQVDVAYFAFKKAFDQVDNDILLGKCASIVFNPKLLSLFASYLQNRLQYVQFLKYKSPQYYTRSGVSQGSTLGPTQFLIMINDLPKSVSTARCLVFVTIQLFTTIADSSSCDSLQADQVASWSNRNRLHFNSNECKVLTITRKLTSFYHEYQLEDTRLERVSDMLDLGLNVDSQFNFRNHITQIFSYFNLWYHNNSPPVSMSQPKAKDLPTVTIVEEPAAEKRRFRYKCECRSVRAIPEVNSFRGNNTGPTITINNHIGQVNIVASCGRYKSLPGGSSSAEVLRTSGLALCFSAGEYACPVWHRSSHAKEVDVALNETCRKITGCLKLTPPNMLYPIAGIAPPIVRRNIICSTEKLKQEQDFWFRYKCVCKSAQAIPGVNSLRGNKTYPTIRINNYTGLVTIVVSCVTKEHPYKPHPHNLVGRLGQEGFKQGVFAIRTQVTRDANEYQFTNLGVQRVKRTQIETSLKNRAKFNIDPFKTGFEHAKDWKTMNLKAIRLAFQVFLHDEGGDKLTPLNPVVSNVVYDKNHIT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -