Pdol010868.1
Basic Information
- Insect
- Plagodis dolabraria
- Gene Symbol
- Su(H)_1
- Assembly
- GCA_963854805.1
- Location
- OY978444.1:7559269-7560147[+]
Transcription Factor Domain
- TF Family
- CSL
- Domain
- BTD domain
- PFAM
- PF09270
- TF Group
- Beta-Scaffold Factors
- Description
- Members of this family of DNA binding domains adopt a beta-trefoil fold, that is, a capped beta-barrel with internal pseudo threefold symmetry. In the DNA-binding protein LAG-1, it also is the site of mutually exclusive interactions with NotchIC (and the viral protein EBNA2) and co-repressors (SMRT/N-Cor and CIR) [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.68 4.3e+04 -3.7 0.0 26 43 190 207 181 212 0.40 2 2 6.7e-32 4.2e-27 96.4 0.0 1 64 226 289 226 292 0.96
Sequence Information
- Coding Sequence
- ATGCCGCACCAGtacggcgcgggcgcgggcgctgGCGGGCTGGCAGGCGGCGGCGCATCGCCTCCGGCGCAGCACGGCGCGCTGTACCCGCGCTACGCGAGTGCTGCCGGGCCCGTTGCTGGTGCTTACCGTCCTGAGGAGCGCCGCCTTACACGGGAAGCTATGGAGCGATATTTGCGAGACCGATCTGACATGGTTGTTGTCATTCTACATGCAAAAGTGGCACAGAAGTCATATGGGAATGAAAAAAGATTCTTCTGTCCCCCTCCCTGTATATATCTATTTGGTGATGGCTGGCGACTGCGACGTGAGCGCATGCTTCGAGAGGGTGAAACGGAGCAAGCGGCACAGCTGTGTGCTTTCATTGGCATTGGTAATTCAGACCAGGACATGCAGCAGCTTGATCTCAATAATGGAAAACAATATTGTGCTGCTAAAACATTGTATATATCTGATTCTGACAAGAGAAAACACTTCATGTTGTCTGTTAAGATGTTCTATGGTAATGGTCATGATAttggtatttttaatagtaaaagAATAAAGGTCATATCAAAACCGTCAAAAAAGAAACAATCCCTAAAGAATGCAGATTTATGTATCGCTAGTGGAACTAAAGTTGCATTGTTTAACCGGCTAAGATCTCAGACTGTGTCAACCAGGTACCTTCATGTTGAGAATGGAAACTTCCATGCATCGTCAACACAGTGGGGAGCTTTTACCATACACCTACTTGATGATAATGAGAGTGAATCAGAGGAATTCGCAGTGAAGGATGGATATGTGCACTATGGATCTACTGTAAAGCTAGTCTGTTCAGTGACAGGCATGGCTCTACCAAGACTCATAATAAGAAAGGTAATTAAAGTTGCTCTATAA
- Protein Sequence
- MPHQYGAGAGAGGLAGGGASPPAQHGALYPRYASAAGPVAGAYRPEERRLTREAMERYLRDRSDMVVVILHAKVAQKSYGNEKRFFCPPPCIYLFGDGWRLRRERMLREGETEQAAQLCAFIGIGNSDQDMQQLDLNNGKQYCAAKTLYISDSDKRKHFMLSVKMFYGNGHDIGIFNSKRIKVISKPSKKKQSLKNADLCIASGTKVALFNRLRSQTVSTRYLHVENGNFHASSTQWGAFTIHLLDDNESESEEFAVKDGYVHYGSTVKLVCSVTGMALPRLIIRKVIKVAL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01086067;
- 90% Identity
- iTF_00913370;
- 80% Identity
- -